Chy2G029620 (gene) Cucumber (hystrix) v1

Overview
NameChy2G029620
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 4203159 .. 4203428 (+)
RNA-Seq ExpressionChy2G029620
SyntenyChy2G029620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACGAAGAATCCAAGGCGAGGTCAAGAGATGATCGGGCAAGAGCTTCAAGATTTGGGTTCTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTAGGATGAAGAAGATGATGGAAATGGCAAAAAAGCATAATTACTCTGCTGAGATGTCGGAATTCAATTGGGTTTTTGAACCCAAATCTCAAATTGGTCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGA

mRNA sequence

ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACGAAGAATCCAAGGCGAGGTCAAGAGATGATCGGGCAAGAGCTTCAAGATTTGGGTTCTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTAGGATGAAGAAGATGATGGAAATGGCAAAAAAGCATAATTACTCTGCTGAGATGTCGGAATTCAATTGGGTTTTTGAACCCAAATCTCAAATTGGTCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGA

Coding sequence (CDS)

ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGACGAAGAATCCAAGGCGAGGTCAAGAGATGATCGGGCAAGAGCTTCAAGATTTGGGTTCTTCTGGGGTTTCCATATCTGCAACTGCTACTTCAATTAGGATGAAGAAGATGATGGAAATGGCAAAAAAGCATAATTACTCTGCTGAGATGTCGGAATTCAATTGGGTTTTTGAACCCAAATCTCAAATTGGTCGAGCTGCTTCCACTGGGTTCTTCTCAGCTTGA

Protein sequence

MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHNYSAEMSEFNWVFEPKSQIGRAASTGFFSA*
Homology
BLAST of Chy2G029620 vs. ExPASy TrEMBL
Match: A0A0A0KK75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.5e-39
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERRTKNPRRGQEMI QELQ+LGSSGVSISATATSIRMKKMMEMAKKHN
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 90
          YSAEMSEFNWVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of Chy2G029620 vs. ExPASy TrEMBL
Match: A0A5A7T3Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002530 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.5e-32
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERRTK+PRR QEM+ QELQDLG SGVSISATATSI MKKMMEMAK++N
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLG-SGVSISATATSITMKKMMEMAKRNN 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 90
          YSAE+SEFN VFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of Chy2G029620 vs. ExPASy TrEMBL
Match: A0A1S4DTC5 (uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.5e-32
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERRTK+PRR QEM+ QELQDLG SGVSISATATSI MKKMMEMAK++N
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLG-SGVSISATATSITMKKMMEMAKRNN 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 90
          YSAE+SEFN VFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of Chy2G029620 vs. ExPASy TrEMBL
Match: A0A6J1KS29 (uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.7e-19
Identity = 63/89 (70.79%), Postives = 71/89 (79.78%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERR KNPR+ +E    E+QDL  SGVSISATA+  R+KKMME+  +  
Sbjct: 1  MADIAILVAEEYERRMKNPRQ-EEKAAAEVQDL-VSGVSISATAS--RVKKMMELELE-- 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 90
            AE +EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 -LAERNEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of Chy2G029620 vs. ExPASy TrEMBL
Match: A0A6J1HEA8 (uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC111463202 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.7e-18
Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERR KNPR+ Q+    E+QDL  SGVSISATA+  R+KKMME+  +  
Sbjct: 1  MADIAILVAEEYERRMKNPRQEQK-AAAEVQDL-VSGVSISATAS--RVKKMMELELE-- 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 90
            A+ +EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 -LAQPNEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of Chy2G029620 vs. NCBI nr
Match: XP_011657992.1 (uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical protein Csa_003490 [Cucumis sativus])

HSP 1 Score: 171 bits (432), Expect = 2.66e-53
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERRTKNPRRGQEMI QELQ+LGSSGVSISATATSIRMKKMMEMAKKHN
Sbjct: 1  MADIAILVAEEYERRTKNPRRGQEMIRQELQELGSSGVSISATATSIRMKKMMEMAKKHN 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89
          YSAEMSEFNWVFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89

BLAST of Chy2G029620 vs. NCBI nr
Match: XP_016899241.1 (PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo] >KAA0036271.1 uncharacterized protein E6C27_scaffold18G00700 [Cucumis melo var. makuwa] >TYK12665.1 uncharacterized protein E5676_scaffold255G002530 [Cucumis melo var. makuwa])

HSP 1 Score: 148 bits (373), Expect = 2.59e-44
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERRTK+PRR QEM+ QELQDLGS GVSISATATSI MKKMMEMAK++N
Sbjct: 1  MADIAILVAEEYERRTKHPRRDQEMVRQELQDLGS-GVSISATATSITMKKMMEMAKRNN 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89
          YSAE+SEFN VFEPKSQIGRAASTGFFSA
Sbjct: 61 YSAEISEFNRVFEPKSQIGRAASTGFFSA 88

BLAST of Chy2G029620 vs. NCBI nr
Match: XP_038882836.1 (uncharacterized protein LOC120073972 [Benincasa hispida])

HSP 1 Score: 124 bits (311), Expect = 6.39e-35
Identity = 71/89 (79.78%), Postives = 78/89 (87.64%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERR KNP + QE   QELQDL +SGVSISATATSIRMKKMMEMAK+++
Sbjct: 1  MADIAILVAEEYERRMKNPTQVQEK--QELQDL-ASGVSISATATSIRMKKMMEMAKQNS 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89
             ++SEF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 ---QISEFKWVFEPKSQIGRAASTGFFSA 83

BLAST of Chy2G029620 vs. NCBI nr
Match: KAG6604012.1 (hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034176.1 hypothetical protein SDJN02_03903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121 bits (304), Expect = 7.46e-34
Identity = 69/89 (77.53%), Postives = 78/89 (87.64%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERR KNPR+ QE   Q+L+DL SSGVSISATA++IRMKKMME+A ++ 
Sbjct: 1  MADIAILVAEEYERRMKNPRQAQET--QKLEDL-SSGVSISATASAIRMKKMMEIAIQN- 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89
            AEM+EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 --AEMTEFKWVFEPKSQIGRAASTGFFSA 83

BLAST of Chy2G029620 vs. NCBI nr
Match: KAG6594853.1 (hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104 bits (260), Expect = 3.68e-27
Identity = 63/89 (70.79%), Postives = 72/89 (80.90%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERRTKNPR+ Q+    E+QDL  SGVSISATA+  R+KKMME+  +  
Sbjct: 1  MADIAILVAEEYERRTKNPRQEQKAAA-EVQDL-VSGVSISATAS--RVKKMMELELE-- 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 89
            A+ +EF WVFEPKSQIGRAASTGFFSA
Sbjct: 61 -LAQPNEFKWVFEPKSQIGRAASTGFFSA 82

BLAST of Chy2G029620 vs. TAIR 10
Match: AT5G65207.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 3.9e-04
Identity = 34/89 (38.20%), Postives = 40/89 (44.94%), Query Frame = 0

Query: 1  MADIAILVAEEYERRTKNPRRGQEMIGQELQDLGSSGVSISATATSIRMKKMMEMAKKHN 60
          MADIAILVAEEYERR K+       +G     +      I     +I   KM   + K N
Sbjct: 1  MADIAILVAEEYERRMKH-----TTVGSRSSPVEFDWWKIIPAKMTIAFDKMKIESLKKN 60

Query: 61 YSAEMSEFNWVFEPKSQIGRAASTGFFSA 90
                     FE KS+   A S GFFSA
Sbjct: 61 -----------FEAKSEFALAISHGFFSA 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KK756.5e-3997.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501230 PE=4 SV=1[more]
A0A5A7T3Y63.5e-3288.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DTC53.5e-3288.76uncharacterized protein LOC103485003 OS=Cucumis melo OX=3656 GN=LOC103485003 PE=... [more]
A0A6J1KS295.7e-1970.79uncharacterized protein LOC111497122 OS=Cucurbita maxima OX=3661 GN=LOC111497122... [more]
A0A6J1HEA83.7e-1869.66uncharacterized protein LOC111463202 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
Match NameE-valueIdentityDescription
XP_011657992.12.66e-5397.75uncharacterized protein LOC105435930 [Cucumis sativus] >KGN48782.1 hypothetical ... [more]
XP_016899241.12.59e-4488.76PREDICTED: uncharacterized protein LOC103485003 [Cucumis melo] >KAA0036271.1 unc... [more]
XP_038882836.16.39e-3579.78uncharacterized protein LOC120073972 [Benincasa hispida][more]
KAG6604012.17.46e-3477.53hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6594853.13.68e-2770.79hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT5G65207.13.9e-0438.20unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36067EXPRESSED PROTEINcoord: 1..89
NoneNo IPR availablePANTHERPTHR36067:SF1EXPRESSED PROTEINcoord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G029620.1Chy2G029620.1mRNA