Chy2G029370 (gene) Cucumber (hystrix) v1

Overview
NameChy2G029370
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 4068033 .. 4069121 (+)
RNA-Seq ExpressionChy2G029370
SyntenyChy2G029370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTCAGTCGGAGGTTCAAATGGCATTATTGTCCTCGACTGTTCATATCTTGATTTTTCTTTATGGCATTTCACTGTTCCTATTACGTATCAAACAATTTTGTGGTACTTAGCTACGTCTATTGATTATTCGAGGTAAGAATATCCAATTTTTATAGGGTTCGGATTGAAATGGTCACAGCTTCACAGGTCGGAGTTTCATGTTCCTTCCATAGAAACTTATCCATTTTCGACCATTCTGTTTCATAAAAGCAGCTTCAGATTTCATTACTCCATCTACTAATTTCAAGTAGGACTGTCATAATTTGGTAACATAAAAAGCAACCTTAATTATTGTCAACTACTTTCAATTTTCATAATTGTACATCTCCCTCTTCGCCAAACACTAGCCATTATACAGATGTTTCTGATTAACTTTTCATTCACTCATCCCTTTTTCTTGCAGTGGTTCATCTATGATCCAAGCATCAACTGTAGCAGCTTCAACTTCCTCTAATTTTCCATCTGTCCCACATTTAAGGTTGGTGCTTTTTCTTTTTTCTTTTCCTCTTTCCTCTTCTCATATCTTGAATATGTTTTCTTGGATCAGATCTGATTGCAGCAAACTTTGAGAAATCATTAATTTTCTCTGTTTCTGTTGCCCTTTTGGGTGTGATTTTGTTGGCATTGTTCTTGCAAACTGTATTTGGCCTTTGAACAGTCAGTGAATCTGAAGAAACCGTGCTATACAATTATACTGCAAATTATGTAAGAAGAAGGTATAATTACTTCTCTGGTAATACTTGTAACATCACTAAACTGTTATGTTGTACTCTGGGATACTTCTTCAAGACCTAAAGTTTGAATATTTCAAATGTGAAAAGAGTGTTATGTGAATGGACTCCGACAATCTCGGAGATGAAGGTGGCACATTATGAGCATGACATCAACAACCAGGCTGAGCACGACTAGGACATCCAAAAGTAGCAAGAGGAACAGGGCTAGTAATATTGATACTGCTCTAAACCGTATTGTCAATGCCATGGAAAAGATGCCAAAAGGCAAAAACAATGTGTTTGGCTACTGAATAGCTATAGTAAAAACTGC

mRNA sequence

ATGTATTTCAGTCGGAGTGGTTCATCTATGATCCAAGCATCAACTGTAGCAGCTTCAACTTCCTCTAATTTTCCATCTGTCCCACATTTAAGTGAATCTGAAGAAACCGTGCTATACAATTATACTGCAAATTATTGTTATGTGAATGGACTCCGACAATCTCGGAGATGAAGGTGGCACATTATGAGCATGACATCAACAACCAGGCTGAGCACGACTAGGACATCCAAAAGTAGCAAGAGGAACAGGGCTAGTAATATTGATACTGCTCTAAACCGTATTGTCAATGCCATGGAAAAGATGCCAAAAGGCAAAAACAATGTGTTTGGCTACTGAATAGCTATAGTAAAAACTGC

Coding sequence (CDS)

ATGTATTTCAGTCGGAGTGGTTCATCTATGATCCAAGCATCAACTGTAGCAGCTTCAACTTCCTCTAATTTTCCATCTGTCCCACATTTAAGTGAATCTGAAGAAACCGTGCTATACAATTATACTGCAAATTATTGTTATGTGAATGGACTCCGACAATCTCGGAGATGAAGGTGGCACATTATGAGCATGACATCAACAACCAGGCTGAGCACGACTAGGACATCCAAAAGTAGCAAGAGGAACAGGGCTAGTAATATTGATACTGCTCTAAACCGTATTGTCAATGCCATGGAAAAGATGCCAAAAGGCAAAAACAATGTGTTTGGCTACTGAATAGCTATAGTAAAAACTGC

Protein sequence

MYFSRSGSSMIQASTVAASTSSNFPSVPHLSESEETVLYNYTANYCYVNGLRQSRR*RWHIMSMTSTTRLSTTRTSKSSKRNRASNIDTALNRIVNAMEKMPKGKNNVFGY*IAIVKTX
Homology
[Close]
BLAST of Chy2G029370 vs. ExPASy TrEMBL
Match: A0A0A0KGX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501970 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 8.0e-45
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 0 

Query: 1   MYFSRSGSSMIQASTVAASTSSNFPSVPHLSESEETVLYNYTANYCYVNGLRQSRR*RWH 60
           MYFSRSGSSMIQ STVAASTSSNFPSVPHLSES+ETVLYNYTANYCYVNGL++SRR  WH
Sbjct: 1   MYFSRSGSSMIQTSTVAASTSSNFPSVPHLSESDETVLYNYTANYCYVNGLQRSRRCSWH 60

Query: 61  IMSMTSTTRLSTTRTSKSSKRNRASNIDTALNRIVNAMEKMPKGKNNVF 110
           IM+MTSTTRLSTTRTSK+SKRNRASNID ALNRIVNAMEKMPKGKN+V+
Sbjct: 61  IMTMTSTTRLSTTRTSKNSKRNRASNIDAALNRIVNAMEKMPKGKNSVW 109

[Close]
BLAST of Chy2G029370 vs. NCBI nr
Match: KGN48808.1 (hypothetical protein Csa_004107 [Cucumis sativus])

HSP 1 Score: 188 bits (478), Expect = 2.03e-59
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 0 

Query: 1   MYFSRSGSSMIQASTVAASTSSNFPSVPHLSESEETVLYNYTANYCYVNGLRQSRR*RWH 60
           MYFSRSGSSMIQ STVAASTSSNFPSVPHLSES+ETVLYNYTANYCYVNGL++SRR  WH
Sbjct: 1   MYFSRSGSSMIQTSTVAASTSSNFPSVPHLSESDETVLYNYTANYCYVNGLQRSRRCSWH 60

Query: 61  IMSMTSTTRLSTTRTSKSSKRNRASNIDTALNRIVNAMEKMPKGKNNVF 109
           IM+MTSTTRLSTTRTSK+SKRNRASNID ALNRIVNAMEKMPKGKN+V+
Sbjct: 61  IMTMTSTTRLSTTRTSKNSKRNRASNIDAALNRIVNAMEKMPKGKNSVW 109

The following BLAST results are available for this feature:
BLAST of Chy2G029370 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G029370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGX68.0e-4589.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501970 PE=4 SV=1[more]
BLAST of Chy2G029370 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48808.12.03e-5989.91hypothetical protein Csa_004107 [Cucumis sativus][more]
BLAST of Chy2G029370 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G029370.1Chy2G029370.1mRNA