Chy2G029220 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATATGCTCGCCTGAGCTTCGATCCCGTCAAGCGATTAGTTTTGCTACTGCACCTGATCAGAACCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACGGGGTTAGTAGACTCCATTTTGTTGATTATTTTGGCCAATGTTTATGTTTTTTTAAAAAAGAATTATATAAATATTTAAACCAACTATTAAATAAAAATTTTAAAAATAAAAATATGCTTTTAGTTTTCAAAACAAAAGAAACAGACAACGAAATATGAAAATTTTGAAAACAAAATGATTGTCAGAATGGGACTTTATTTTTTGTTTTGTTTCTTTCAATATGAAATGGGTTAATGTGTGAAAACAGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACAGGAATAAAAAACCAGTCAATCAACATGGTAATTAAACACGTACACATCCTTAAAAGGAAAAAGTAAATGTGTGCATGATTTACTAGTTAAATGATTTTAATTAGTATATTGTTGTTTTGATGATGTGATTGAAGAATATGATAAAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGTCACGCCATCAAGCTCATCCAAATTGAACTGCTCGACAATATGTTGTTGTTTGTTGGGTTGGTAGCTCCGTGTCGTCGAGTGTTTGGTTTCTCATCTTTTTGTTGGATATATCGTTTTGTGGGAATTTAGGTTCGTTATTCGTCACTATTTTCCTCATGTGGTAACTAAAGATGGTTTCACTTTCACCTGTACGTGTATATTATTGGGTATTTTCTTCATATAGTAAGGATGTATCCTTTTCATGGTAATTTTGATATTTGCATCATATGAACATATGAAAAACAACGTTCAATCACAATAATAAATGAAATGCTCAATAGTTGAATAGCGCGCTATAGATCTGTAGGATGTTTCTTAGCTTCCCAATCTCTCTAAAGATGATGCCTTAAAGGTCGGACCGTATATATTTATGTTCTTGAATTCATCTCTTATATTATACGTAGGTGGAGGTAATCTTTAAAACTTTTAAGGAATTTTGAACTGGATAACATTTTTATATTTTGTATAATGTTACTCAGTAATCGATTTAAATTGAAATAAATTGACTGACCTAGGGGAAAGAAATTTGATTAAAATATTACTCGAGTTTGTGAACAATAATTTCAAAAACAAAATAAAATTTGATACAAACGGTAATACAAGGAGATAATATTTGATACAATGAATATAAAATAAAAAAAAACTCCCAACATAATCAGCCCAGTAAACTCTAGGCAATAAAAAGTAATGTGAAAAATATTATATATTAATTAATTAGAGATATTAATACAAAAATATTAAATATTAAATTATTAATATGAAAAAGACCAAGTAAGAGTAATCCCAATGAATCCCTTGATAAGACATCTAAATTAAGACGGTAAAAGTTGGGAACTTTCTTCAAATCTGCAGACCTTCTTAGTCCCATATTTTAAAAATAGGTTTAGAAAAGTACTTCAAATTTCTATTTCAAATTTAAATGTTATACCGCGTCTCATATTAGAACCATAAATTTTAAAATTTCAGGACTAAAGGAATCTATTAAGTCCTTTCTGGCTTTTAAAGATATATATATATATATTTTTTATATTCAAACTATTAGTAATATACTCTATTAAGTTTTTAGGATGGTGGTAACATTTTTTAAAAATAATTTAGTTTTTAAATCATATTTCACACAGAATTTAGTTAAAAAGAAAGTGAGATTTCCAAAAATAGCACAAAATTATTTTTGAAATTTTTTAATTATCTAATAGGTAAATTTTGA ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATATGCTCGCCTGAGCTTCGATCCCGTCAAGCGATTAGTTTTGCTACTGCACCTGATCAGAACCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACGGGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACAGGAATAAAAAACCAGTCAATCAACATGGTAAATTTTGA ATGATAAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTGTGCTCACATCACCTCTTCCGCCGAAGCTTCGCCGTATATGCTCGCCTGAGCTTCGATCCCGTCAAGCGATTAGTTTTGCTACTGCACCTGATCAGAACCCAAAGTGCGAAGAAATGGATGACTCTCAGAACAAAACCAAGGAGACGGGAGATATAATGTGTGATTCATTCGGAGAAGGGTATGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAGGGAAATATCAGTCAATTGACGATGACGAACACAGGAATAAAAAACCAGTCAATCAACATGGTAAATTTTGA MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRSRQAISFATAPDQNPKCEEMDDSQNKTKETGDIMCDSFGEGYATRSEEEGFGGTYGGKYQSIDDDEHRNKKPVNQHGKF* Homology
BLAST of Chy2G029220 vs. ExPASy TrEMBL
Match: A0A0A0KGG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502630 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.2e-52 Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Chy2G029220 vs. ExPASy TrEMBL
Match: A0A5D3CN97 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002150 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44 Identity = 95/110 (86.36%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Chy2G029220 vs. ExPASy TrEMBL
Match: A0A1S3B3C5 (uncharacterized protein LOC103485350 OS=Cucumis melo OX=3656 GN=LOC103485350 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44 Identity = 95/110 (86.36%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Chy2G029220 vs. ExPASy TrEMBL
Match: A0A6J1IUE6 (uncharacterized protein LOC111478513 OS=Cucurbita maxima OX=3661 GN=LOC111478513 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 5.5e-27 Identity = 70/105 (66.67%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Chy2G029220 vs. ExPASy TrEMBL
Match: A0A6J1BUB9 (uncharacterized protein LOC111005770 OS=Momordica charantia OX=3673 GN=LOC111005770 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25 Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Chy2G029220 vs. NCBI nr
Match: XP_011658492.1 (uncharacterized protein LOC101219972 [Cucumis sativus] >KGN48825.1 hypothetical protein Csa_003589 [Cucumis sativus]) HSP 1 Score: 212 bits (539), Expect = 1.29e-68 Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Chy2G029220 vs. NCBI nr
Match: XP_008441122.1 (PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo] >KAA0036233.1 late embryogenesis abundant protein [Cucumis melo var. makuwa] >TYK12628.1 late embryogenesis abundant protein [Cucumis melo var. makuwa]) HSP 1 Score: 185 bits (469), Expect = 6.25e-58 Identity = 95/110 (86.36%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Chy2G029220 vs. NCBI nr
Match: XP_038883658.1 (uncharacterized protein LOC120074572 [Benincasa hispida]) HSP 1 Score: 159 bits (403), Expect = 6.64e-48 Identity = 86/104 (82.69%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of Chy2G029220 vs. NCBI nr
Match: XP_022978574.1 (uncharacterized protein LOC111478513 [Cucurbita maxima]) HSP 1 Score: 130 bits (326), Expect = 3.56e-36 Identity = 66/88 (75.00%), Postives = 74/88 (84.09%), Query Frame = 0
BLAST of Chy2G029220 vs. NCBI nr
Match: XP_023543425.1 (uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127 bits (319), Expect = 3.44e-35 Identity = 69/105 (65.71%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of Chy2G029220 vs. TAIR 10
Match: AT5G66780.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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