Chy2G029040 (gene) Cucumber (hystrix) v1

Overview
NameChy2G029040
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 3893950 .. 3899713 (-)
RNA-Seq ExpressionChy2G029040
SyntenyChy2G029040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATTAACTAATCCACCGTCGTCCAAATGGTCACCGCCGCCGTTGCCAGAGCTCCTCGCTGGATTCCGAAACGGGGCCAAGTCCTCCGCAGTGTTCTTAAAAAGCTGTTCTTCTTCTGTATTTGTTCCGTCGATCGGAGTTCTTCTCCGCCGATCTCCTCTCGCGTTTTTCCTCGAAATATTTAACACACTATATTACTCTTTAGAACAGATGGTTTCAGTTTCGAAATTTTCGTTACATGGTTGAAGCGCGCGCGATCGGAGATGAGATTAGGCTCTGCCTTCTGCGATTCTCTTACTCTTAATCCCTAATCCCCAATTCCATTTTCTCTTCGATTTTTTCTTCTTTTTGTTTTATTATATTGAAATTGGCTGCTTATTTTGTTTGTTTGATTGTGATGTTGAAGTTCAATCCACTGATTAAGTAAAATATATGTATGGCGATCGATTAGTTTATTCGGAATTTGGGTGTCTGATTGAACTGGATCGAATTCCATTGTGTTTCGGGTTGGAAACTGAAAAACGCCCAAAATGAAATGGATTTTCCCGGGAAAAAGAAAAAGAATTTCCCGAGAAAGTCATAGAAAATGAAATTTAGGCGCAGCTTCATTGCCTCGTTGACTGACCTCCGCACGCAAACGAACCTCGTTGCCCTTTCCATTTTTTTTTTCTTTTGCCGTGTAACTTTTCATAGAAGGTTGATATTTTCTTGTTATTCATCTTTAGAATTACAAGTATAATTATAGACAATACAAGTGCAACATAAGGAAAGTGTAATACAAATGCAACATAAGGAAAGTATCAATCACAAAAATATACACACACATAATTGTGGCATAATTACGGTAATATCCTCCCTCAAACTCAAGATGGTAGAGTCGACACCACCTTGAGTTTGTCAAGTAGCTGAGTGAAACGAGGAGAATGGAGAGCTTTGGTGAAAATATCTGCAGGTTGATCAGTAGTGGAGATGGATTGGAGATGGAGAGTGTTGCTCTGAAGATGATGGCGAACAAAGTGACAATCGTTCTCAATATGCTTTGTTCGTTCATGAAAGACATCATTGTGTGCAATCTGAATAGCACTGCGGTTATCACAATGAAGAATAGTGGGTGATGTCTGTGGGACTCCCATATCAGTAAGAAGCCAACGAAGCCATAATAGTTCAGAAGTAGCATCAGCTAGAGCACGATATTCAGATTCTGTGCTGGAACGGGAGACAACAGATTGTTTCTTGCTTCGCAAGGAGATAAGGGCATCACCTAAATAGAAGCAATAACCAGTTGTAGATCGTCTATCAGTAGGATCACCTGCCCAATCAGCATCAGAGAATCCAGAGAGAACCAAAGAGGACTTGGAGGCAAATTGTAAACCGTGAACCAAAGTTCCTTTAATATAGCGAAGAATGCGAAGAACAGCAGTGAAGTGAATAGTGCGAGGAGCAGCCATGAATTGACTAACAATGTGAACTGCATATGCAATATCTGGACGGGTCACAGTTAAGTAAATTAGACTGCCAACAAGTTGTCGGTACAAAGTGGGATCGGTAAGAGGAACACCATCCAAAGGAGTGAGTCGTACATTTGGATCTAGAGGCGTTGATGATGTGGTAGAATCAGTAATACCAGATCGACTGAGGAGATCAGATGCATATTTGGCTTGAGATAAGTAGTAGCCATTAGTTGAGGATGAGATCTCAAGACCCAAAAAATAGTTGAGAGTTCCTAAGTCCTTCATCTCAAAGTGCTTACCGAGATAATATTGTAATTCAGTTATGGCTTGAGGGTCATCACCTGTAATAATCATGTCATCAACATATAAGAGGAGAAGAACTAGACCACGAGGTGTCTGACAAGTAAATAAGGCCGAATCATGAGAGCTGGAGGTGAACCCAAGTTGGGTAATAGTGGAACTGAATGTTGCAAACCAAGCTCGAGGAGCCTGTTTGAGGCCGTAGAGAGCACGGCGGAGCAGACACACTTTCTGAGGTGGCGGAGTAGTACCAGGTGGTGGTTTCATATAGACTTCTTCAGATAGTGTTCCATTGAGGAACGCATTTTTGACATCCATCTGAAGGAGGGGCCATTGTTTTGCAGCTGCAATGGCCAGAAGACTGCGAACAGACGTCATTCGAGCTACAGGAGCAAACGTTTCTTCATAATCAATGCCATATTCCTAAGAATAACCTTTGGCCACAAGTCGTGCTTTGTATCGTTCAATAGAGCCATAAGAGTGTGTTTTTATTTTAAAAATCCACTTGCAACCGATAGGTTTCTTGCCAGGAGGTAAGTCAACATAGTCCCAAGTATGAGCCTTTTCTAAGGCTTGGACTTCTTCATTCACTGCTTGCTGCCACAATGGGTTAGTAATGGCCTCCTTATACGAGGACAGTTCAACCAAAGACATGATAGTGGAAAAACAATGATAATCTGTAAGATGAGAAGGAGATTCCCTTACCCGGGTAGACCGTCGGATCGGTGCAGATTCAAGTTCCTCACAAGGGGCAGATGAGAGATCCGGGAGCTCATAGATAGGATCAGATTCAGTGAGGTCAGATATGGGTAGAGGACAAGGTGTAGTGTTGGATGATGAGTCAGAAATGGGGAATAGGTCAATAGACGGATCAGTGAAAAATAAGTGTTGACCAGATAGAGATGCATGAAATGAAGAAAGACTAGAAAACATACAATGTTCCCAAAAGGTGACATGACGAGATATTCGTAATCTTTGAGAGATGGGATCCCAACAGCGAAATCCTTTGTGTTCAGTACCGTAACCCAAGAAACAACAAAGACGAGCCCTTGGTTCAAGTTTGGTATGTTCATGAGGATGTAATAACACAAAACATGCACAACCAAAGACCTTGAGATTAGAGTACGAGGGGGAAGTACTGTATAGTCGCTCAAACGGGGAAACATTCTGAATGACATGAGAAGGAATGCGATTGATGACATAGACTGAGGTGAGAGCAGCCTCTCCCCAAAATTTTTCAGGACATGAAGCAGAGAGAAGTTGAGCGCGAACAGAGTCTAGAATGTGACGGTGTTTGCGTTCAGCTCTTCCATTTTGCTGGGAGGTACGAGGACATGAGCGTTGAATCAAAGTGCCTTGATGGGCACAAAATGAAAGAAGGCGGGAGTCTTTATATTCCATCGCATTGTCAGTGCGAAGGATTTAATTTTTCTAGAAAATTGTGTGTGAATCATATTTGCAAAATCAACATAAGTTTGATATAACGAGGAACGGTGTTTAAGAAAGTAAATCCAAGTGAAACGAGAGTCATCAATAAATAAGACAAAATATCGATAACCATTAACAGTAGTACAAGGAGCAGGACCCCAAATGTCAGAATGAACAAGACCAAAAGGAGTATCACATAATGAAGCGGAATTAGAAAATGATAAAGCAGGTTGTTTCGCAAGTTTGCAATTTAAACAGTCAAAAGGACTAAACTTTGAAATATTATTCAAATTGCCAGTAGAAACTAAAGTACGAATTTTGTCAGAGGAAGCATGACCTAGACGGAGATGCCACTGATATATAGTGTTATCAGTGACTGGTGCTGAGATGGGTGGGAACAGAGGAGAATGCTGAAGAGATGTGAGCTCAAATAATCGTCCCACCTTCCGTCCCGTACCAATCACTTGTCCCGTCTGAGAATCCTGAACCTGACACCCATGAGAAGAAAAGATAATGGTTAGTCCGAGATCACATAGTTGGCCAACAGAGGCTAGGTTAAATGTGAGGTTTGGAACATGATATGTGTTTGGCAGATTTATGGTGGTTGTATTAACAGATCCAATGTGAGAAATAGACATATGATTACCATCAGCTGAATGAATGGGGGGAAGGGATTGAACAGGAATAGGGGAAGTCAATAATGAAATGTCAGAAGTCATGTGATTACAACAAGCCGAATCAAGAAGCCAAGAGGTACCTGGAGTGACTGCAAGAGCAGTAGAGTTGGAAGAGATCACCTGTTTCAGTAAGTCATGCAGATTATTTAACTGAGGTGTAGTGATATCAGATGGGGTAGCAGCAGCAACCACAGGGTGAGAACCAGTTTTAGAAGAAGACTTGGATTTGTAGGAGTGACCAGAAGGGCGGGGTGGGCGAGTGGGACAATTTTCCAGGATGTGACCTCGCTTGTGACAATACCTGCACTCAATAGCAGGACAATTAGCAAATTTATGTCCATGAAGTTTACAATTTTTGCAAAAAATGGTCTCAGTAGTAAGGCGTGGATGGGTGGTTGCAAGAGCGACATCAGAGGGTAGAGGAGAGACAATGCCAAGACGTTTTTCTTCAAATAAAATTTCTTGAATGGCGGCGTCGAGGGATGGCAGAGGGTTGCGATGTAAAATAGCAGCTCGAACTGATTCATACTCTGGGCGCAGGCCCATGAGGACTTTAATGAGGCAAAGATGATGTGGACTGATTTTTGCCTGGTCTAGCTGAGTCCAAATTGGCTGAAGGGTGGCAAGATACTCATTCACAGATTGTCCTCCCTCCTGATTTAGACTAACAAGGCGAGAGTGTAATTGATAATAATGAGCAAGTCCAATAGACTGAAAACGTGTGGACAGAAAATCCCAAAGATTTTTGGCAGTATCAAATGCATCAAATTGAGTATGAATTGCCGGGATAGAAGTGTTACCCAACCAAGTGATGATTTGATGATTTTTACTATCCCAGTCCTCAAGTTTTTCAATGTACTTGTCGTCCTCTGCCGAAGTGTTTTCAAGAATAACATCAGAAGGGTCTGTTTTATTTTCATCATTGGTGTCTGTACAAATTGTTTTCTTGGGAGGAGTGGGTTTGGTGATATCGCCGGTAACGATACGCCATAGCTTTCGACCAATCAGAAAGCTTCTCATTTGGTGAGCCCAAGTAATATAGTTGGAGCCATCAAGTATTGTGCTAATAGGACGAGCAATATCATGTTTCTCCATCTACACAGAAATCACAGAGCACACACCACAAAGATATAAGAAGAAACTGTGGATCTTCAGCAAGGTGAGTGAGGTTATGGATCTGGTTCAGCAACCGATTGGGAAACGTGAATATGTGCGTTACAGAAACGTGAAGTTCTTGACGGACGAGGACGAAGACGAACGTGAATCGGAGCTGCGAATGGATGCGGATGAGGACAGACGTGAATCGGAGCTGCGAACGGACGCGCGATCTGGGTTCGACAGATCTGAGTTCGTCGGATTTGATTGACGAAGACGGACGTGAATCGAAGCTGCGAGTGGACGCGGATGAGGACAGACGTGAATCGGAGCTGCGAACGGACGCGCGATTTGGGTTCGTCGGATTTGATTTGAACGGAGACGTTGAACGGAGACGAACTTCGTTGAATGGAGACGAACTTCTCGGCTGTGAGATCTATTCTTCAGATCTGAACAAGAGACTTGCAGACAGATCGGCGGCGGCGGCGGCTATACAGCTTTACGACAGAGATCAGCAGCGGCGACGGCTATACAGCTTCACGACAGAGATCGACGGCGGCAACGGCTATACAGTAACCCTAGATTAGAGGCTCTGATACCATGTAACTTTTCATAGAATGTTGATATTTTCTTGTTATTCATCTTTAGAATTACAAGTATAATTATAGACAATACAAGTGCAACATGAGGAAAGTGTAATACAAATGCAACATAAGGAAAGTATCAATCACAAAAATATACACACACATAATTGTGGCATAATTACGGTAATATGCCGGAGAAATTGCAATTTATGTCTTCTACTTTGAACCA

mRNA sequence

CAATTAACTAATCCACCGTCGTCCAAATGGTCACCGCCGCCGTTGCCAGAGCTCCTCGCTGGATTCCGAAACGGGGCCAAGTCCTCCGCAGTGTTCTTAAAAAGCTGTTCTTCTTCTGTATTTGTTCCGTCGATCGGAGTTCTTCTCCGCCGATCTCCTCTCGCGTTTTTCCTCGAAATATTTAACACACTATATTACTCTTTAGAACAGATGGTTTCAGTTTCGAAATTTTCGTTACATGGTTGAAGCGCGCGCGATCGGAGATGAGATTAGGCTCTGCCTTCTGCGATTCTCTTACTCTTAATCCCTACTCCGCACGCAAACGAACCTCGTTGCCCTTTCCATTTTTTTTTTCTTTTGCCGTAAATTGCAATTTATGTCTTCTACTTTGAACCA

Coding sequence (CDS)

CAATTAACTAATCCACCGTCGTCCAAATGGTCACCGCCGCCGTTGCCAGAGCTCCTCGCTGGATTCCGAAACGGGGCCAAGTCCTCCGCAGTGTTCTTAAAAAGCTGTTCTTCTTCTGTATTTGTTCCGTCGATCGGAGTTCTTCTCCGCCGATCTCCTCTCGCGTTTTTCCTCGAAATATTTAACACACTATATTACTCTTTAGAACAGATGGTTTCAGTTTCGAAATTTTCGTTACATGGTTGAAGCGCGCGCGATCGGAGATGAGATTAGGCTCTGCCTTCTGCGATTCTCTTACTCTTAATCCCTACTCCGCACGCAAACGAACCTCGTTGCCCTTTCCATTTTTTTTTTCTTTTGCCGTAAATTGCAATTTATGTCTTCTACTTTGAACCA

Protein sequence

QLTNPPSSKWSPPPLPELLAGFRNGAKSSAVFLKSCSSSVFVPSIGVLLRRSPLAFFLEIFNTLYYSLEQMVSVSKFSLHG*SARDRR*D*ALPSAILLLLIPTPHANEPRCPFHFFFLLP*IAIYVFYFEP
Homology
[Close]
BLAST of Chy2G029040 vs. ExPASy TrEMBL
Match: A0A0A0KKE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502780 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 1  QLTNPPSSKWSPPPLPELLAGFRNGAKSSAVFLKSCSSSVFVPSIGVLLRRSPLAFFLEI 60
          QLTNPPSSKW P  LPELLAGFRNGAKSSAVFLKSCSSSVFVPSIGVLLRRSPLAFFLEI
Sbjct: 25 QLTNPPSSKWPPSRLPELLAGFRNGAKSSAVFLKSCSSSVFVPSIGVLLRRSPLAFFLEI 84

Query: 61 FNTL 65
          FNT+
Sbjct: 85 FNTI 88

[Close]
BLAST of Chy2G029040 vs. NCBI nr
Match: KGN48842.1 (hypothetical protein Csa_003334 [Cucumis sativus])

HSP 1 Score: 117 bits (293), Expect = 6.27e-31
Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 1  QLTNPPSSKWSPPPLPELLAGFRNGAKSSAVFLKSCSSSVFVPSIGVLLRRSPLAFFLEI 60
          QLTNPPSSKW P  LPELLAGFRNGAKSSAVFLKSCSSSVFVPSIGVLLRRSPLAFFLEI
Sbjct: 25 QLTNPPSSKWPPSRLPELLAGFRNGAKSSAVFLKSCSSSVFVPSIGVLLRRSPLAFFLEI 84

Query: 61 FNTL 64
          FNT+
Sbjct: 85 FNTI 88

The following BLAST results are available for this feature:
BLAST of Chy2G029040 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G029040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKE61.9e-2393.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502780 PE=4 SV=1[more]
BLAST of Chy2G029040 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48842.16.27e-3193.75hypothetical protein Csa_003334 [Cucumis sativus][more]
BLAST of Chy2G029040 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G029040.1Chy2G029040.1mRNA