Chy2G028460 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G028460
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein WUSCHEL
Location	chrH02: 3513690 .. 3515294 (-)
RNA-Seq Expression	Chy2G028460
Synteny	Chy2G028460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACATCCGGCCAAACAACAACAACAAGAACAAGGAATTAATGATCAAGGTGGTGAAGGTGGTGGTGGAAGCAATGGAAAAGGTGGGTTTTTGTGTAGGCAAAGTAGCAGTCGATGGACTCCAACAACCGACCAAATACGAATATTGAAAGAGCTTTATTATAACAATGGCGTTCGCTCCCCAAGCGCAGATCAAATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGGTAAAATCGAAGGCAAAAACGTTTTTTATTGGTTTCAAAACCATAAGGCTCGTGAAAGACAGAAGAAAAGATTCACTTCAAATTCCCATTCTTCTATTACTACCTCCACTACTACTACAACTACTACTGATTTTAAAATTTCTTCAACTAATAATAATATTAACTGGAAGTCTGAAGATCATTCCTCCTCTTCTCATAACAAATTTCCTCCAGGTTCGTTGTTTCTTATAATAATCTGTTTCTGTTTTTTTTTTAAGGAAAGGAATAACAATTGCTTTAATTGATTCTTGTTTTTGCAGCTCCTTCTTCATCGGTTATGGTCGCCGTTGGCCATATGGGAAATTACGGATATGGGTCTGCCACTTTTGAGAACAGTTTTAGAGTATGTTCTAATTTTTACCATACTAAATTTTCATGTTTAATTTTATCAGGGTTTTTTTTTCCCTTTCACGTGTTCTGAAGTCAAGAAATGGAAATTTTTTGCTCTTGTTTTGTTTTGTTTTTTTGTTTGAGAGAAGCAGGAACAACCACTTCAGAAAAATTTGGAAAATAAGATCATAGAGCGAAACATTTGAGTTTTTTTTCCTTCTATTATTTATAGCGATTTCTGTTTGTTTCTCGTCGTTTTTTAAATTATGAATTTTACTTTATTGAAGAAACATTTGAATTTGTGCTGCTAGTTGAATTTTGGAAACAAGAAATTACTTTTTAGTTTCCATACTTGGTTCTTTAAAAAGTCTAGTAAAAAGTGAACAAACTTTTAAATTTCATAAAGATCAAAGGTTTTGTCTTTACAAGAAAAAAAACATTTTTTTTTCTAAAAATCGAACAGTTATCGAACAAATTTAGTATTTGGAATGATTTTGGATACAATGTATAATAAATAAGTGGGTAATTTTAGGAGTGATTTTGCAAGGTGTGTGATCTTTTGTCGATTAATCCAAATTTGATCTGATTCCGCTACGCCACTTCTTCCCGTTTCTCAGGAGTGTTCAATATCGTCGGGAGGAAATAGCAGTGTCGTCGGGTACCGGAGCCACAACATGGGATCATGGATCGGCATCGATCCGTATTCATCTTCAGCAGCTGCGGCGGCGGGGGGATCAGCCAATGTGTTTGAAAAAACAAAATATGTTGAAGAATCCATGGAAGATCATGAGGAGCAAGAGATCGAAACTCTCCCCCTTTTCCCCATCCATGGTGACCGGAATAATCTCGGTGGTTTCTGCAGCATGAAGCCGGAATATTCAGAGAGCTACTACACCACCACTTGGTACGGGCGGTCTGACGATAATGGAGCCGCCGGTTCTCGGGCTTCGCTGGAACTCAGCCTCAACTCTTACGCCACCATCTCACCTGATGATGGAATGTGA

mRNA sequence

ATGGAACATCCGGCCAAACAACAACAACAAGAACAAGGAATTAATGATCAAGGTGGTGAAGGTGGTGGTGGAAGCAATGGAAAAGGTGGGTTTTTGTGTAGGCAAAGTAGCAGTCGATGGACTCCAACAACCGACCAAATACGAATATTGAAAGAGCTTTATTATAACAATGGCGTTCGCTCCCCAAGCGCAGATCAAATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGCTCCTTCTTCATCGGTTATGGTCGCCGTTGGCCATATGGGAAATTACGGATATGGGTCTGCCACTTTTGAGAACAGTTTTAGAGAGTGTTCAATATCGTCGGGAGGAAATAGCAGTGTCGTCGGGTACCGGAGCCACAACATGGGATCATGGATCGGCATCGATCCGTATTCATCTTCAGCAGCTGCGGCGGCGGGGGGATCAGCCAATGTGTTTGAAAAAACAAAATATGTTGAAGAATCCATGGAAGATCATGAGGAGCAAGAGATCGAAACTCTCCCCCTTTTCCCCATCCATGGTGACCGGAATAATCTCGGTGGTTTCTGCAGCATGAAGCCGGAATATTCAGAGAGCTACTACACCACCACTTGGTACGGGCGGTCTGACGATAATGGAGCCGCCGGTTCTCGGGCTTCGCTGGAACTCAGCCTCAACTCTTACGCCACCATCTCACCTGATGATGGAATGTGA

Coding sequence (CDS)

ATGGAACATCCGGCCAAACAACAACAACAAGAACAAGGAATTAATGATCAAGGTGGTGAAGGTGGTGGTGGAAGCAATGGAAAAGGTGGGTTTTTGTGTAGGCAAAGTAGCAGTCGATGGACTCCAACAACCGACCAAATACGAATATTGAAAGAGCTTTATTATAACAATGGCGTTCGCTCCCCAAGCGCAGATCAAATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGCTCCTTCTTCATCGGTTATGGTCGCCGTTGGCCATATGGGAAATTACGGATATGGGTCTGCCACTTTTGAGAACAGTTTTAGAGAGTGTTCAATATCGTCGGGAGGAAATAGCAGTGTCGTCGGGTACCGGAGCCACAACATGGGATCATGGATCGGCATCGATCCGTATTCATCTTCAGCAGCTGCGGCGGCGGGGGGATCAGCCAATGTGTTTGAAAAAACAAAATATGTTGAAGAATCCATGGAAGATCATGAGGAGCAAGAGATCGAAACTCTCCCCCTTTTCCCCATCCATGGTGACCGGAATAATCTCGGTGGTTTCTGCAGCATGAAGCCGGAATATTCAGAGAGCTACTACACCACCACTTGGTACGGGCGGTCTGACGATAATGGAGCCGCCGGTTCTCGGGCTTCGCTGGAACTCAGCCTCAACTCTTACGCCACCATCTCACCTGATGATGGAATGTGA

Protein sequence

MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNMGSWIGIDPYSSSAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM*

Homology

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BLAST of Chy2G028460 vs. ExPASy Swiss-Prot
Match: Q8LL11 (Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.1e-40
Identity = 114/288 (39.58%), Postives = 146/288 (50.69%), Query Frame = 0


Query: 20  EGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY-- 79
           E G   N    F+CRQ+S+RWTPTTDQIRILK+LYYNNGVRSP+A+QIQRISA+LRQY  
Sbjct: 28  EDGSNKNNSSNFMCRQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGK 87

Query: 80  ------------------------------------------------------------ 139
                                                                       
Sbjct: 88  IEGKNVFYWFQNHKARERQKKRLIAAATTDNTNLPMQMQFQRGVWRSSADDPIHHKYTNP 147

Query: 140 -----APSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNMGSWIGID 199
                + SS  ++AVG  GN+GYG+   E SFR+CSIS G + S   +  H   +W G+D
Sbjct: 148 GVHCPSASSHGVLAVGQNGNHGYGALAMEKSFRDCSISPGSSMS---HHHHQNFAWAGVD 207

Query: 200 PYSSSAAAAAGGSANVFEKTKYVE-ESMEDHEEQE---------------IETLPLFPIH 225
           PYSS+       +    EKTK+ E E++E  EEQ+               IETLPLFP+H
Sbjct: 208 PYSSTT------TYPFLEKTKHFENETLEADEEQQEEDQENYYYQRTTSAIETLPLFPMH 267

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BLAST of Chy2G028460 vs. ExPASy Swiss-Prot
Match: Q6YBV1 (Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 115/292 (39.38%), Postives = 148/292 (50.68%), Query Frame = 0


Query: 6   KQQQQEQGINDQGGEG-GGGSNGKGG--FLCRQSSSRWTPTTDQIRILKELYYNNGVRSP 65
           +QQQQ+QG   Q  +G G  +NG GG  FLCRQSS+RWTPTTDQIRILK+LYYNNGVRSP
Sbjct: 4   QQQQQQQGNEQQDSQGIGKINNGSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSP 63

Query: 66  SADQIQRISARLRQYA-------------------------------------------- 125
           +A+QIQRISA+LRQY                                             
Sbjct: 64  TAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKKRFTADHHHHMNVPTIHNHHYKP 123

Query: 126 ---------------PSSS------VMVAVGHMGNYGYGSATFENSFRECSISSGGNSSV 185
                          PSSS      +     H+GNYGYGS   E SFREC+ISS  +++V
Sbjct: 124 PPVYNKFSNMNSGSFPSSSNGSPGFLTTPGSHVGNYGYGSVAMEKSFRECTISSTTDANV 183

Query: 186 VGYRSHNMGSWIGI-----DPYSSSAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPL 225
            G  S N+ +WIGI     +PY+           N +++T  +EE  E++   EIETLPL
Sbjct: 184 GGSMSQNI-AWIGINNEYHNPYTFIDTRK---YMNGYDQTLEIEEEAEENYTAEIETLPL 243

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BLAST of Chy2G028460 vs. ExPASy Swiss-Prot
Match: Q84VT7 (Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.6e-33
Identity = 102/280 (36.43%), Postives = 137/280 (48.93%), Query Frame = 0


Query: 23  GGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY----- 82
           GG N    FLCRQSSSRWTPT+DQIRILK+LYYNNGVRSP+A+QIQRISA+LRQY     
Sbjct: 10  GGKNSNNSFLCRQSSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEG 69

Query: 83  ------------------------------------------------------------ 142
                                                                       
Sbjct: 70  KNVFYWFQNHKARERQKKRLIAAASATDNNNISSMQMIPHLWRSPDDHHKYNTATTNPGV 129

Query: 143 ---APSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHNMGSWIGIDPY 202
              +PSS  ++ V   GNYGYG+   E SFRECSIS  G S       H   +W+G+DPY
Sbjct: 130 QCPSPSSHGVLPVVQTGNYGYGTLAMEKSFRECSISPPGGS------YHQNLTWVGVDPY 189

Query: 203 SSSAAAAAGGSANVFEKT--KYVEESMEDHEEQE--------IETLPLFPIHGDRNNLGG 225
           ++ +  +   +    EK+  K+ EE++++ +E+E        +ETL LFP+H + N +  
Sbjct: 190 NNMSTTSP-ATYPFLEKSNNKHYEETLDEEQEEENYQRGNSALETLSLFPMH-EENIISN 249

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BLAST of Chy2G028460 vs. ExPASy Swiss-Prot
Match: Q9SB92 (Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 1  MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
          ME P  Q    Q  + + G      +G GG+ CRQ+S+RWTPTT+QI+ILKELYYNN +R
Sbjct: 1  MEPPQHQHHHHQA-DQESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIR 60

Query: 61 SPSADQIQRISARLRQY 78
          SP+ADQIQ+I+ARLRQ+
Sbjct: 61 SPTADQIQKITARLRQF 76

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BLAST of Chy2G028460 vs. ExPASy Swiss-Prot
Match: Q7XM13 (WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 1  MEHPAKQQQQEQGINDQGGEGGGGSN--GKGGF-LCRQSSSRWTPTTDQIRILKELYYNN 60
          M+H  +QQ+Q+ G       GGGG    G+GG  +CR S +RWTPTT+QI+IL+ELYY+ 
Sbjct: 1  MDHMQQQQRQQVG-------GGGGEEVAGRGGVPVCRPSGTRWTPTTEQIKILRELYYSC 60

Query: 61 GVRSPSADQIQRISARLRQY 78
          G+RSP+++QIQRI+A LRQY
Sbjct: 61 GIRSPNSEQIQRIAAMLRQY 73

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BLAST of Chy2G028460 vs. ExPASy TrEMBL
Match: A0A0A0KH83 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.3e-118
Identity = 232/304 (76.32%), Postives = 232/304 (76.32%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQY------------------------------------------- 120
           SPSADQIQRISARLRQY                                           
Sbjct: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT 120

Query: 121 ----------------------------APSSSVMVAVGHMGNYGYGSATFENSFRECSI 180
                                       APSSSVMVAVGHMGNYGYGSATFENSFRECSI
Sbjct: 121 DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECSI 180

Query: 181 SSGGNSSVVGYRSHNMGSWIGIDPYSSSAAAAAGGSANVFEKTKYVEESMEDHEEQEIET 234
           SSGGNSSVVGYRSHNMGSWIGIDPYSS AAAAAGGSANVFEKTKYVEESMEDHEEQEIET
Sbjct: 181 SSGGNSSVVGYRSHNMGSWIGIDPYSSPAAAAAGGSANVFEKTKYVEESMEDHEEQEIET 240

[Close]

BLAST of Chy2G028460 vs. ExPASy TrEMBL
Match: A0A1S4DTA3 (protein WUSCHEL OS=Cucumis melo OX=3656 GN=LOC103485357 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.1e-117
Identity = 227/239 (94.98%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1   MEHPAK----QQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYN 60
           MEHPAK    QQQQEQGI+DQGGEGGGGSNGK GFLCRQSSSRWTPTTDQIRILKELYYN
Sbjct: 1   MEHPAKQQQQQQQQEQGIHDQGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYN 60

Query: 61  NGVRSPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSS 120
           NGVRSPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSS
Sbjct: 61  NGVRSPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSS 120

Query: 121 VVGYRSHNMGSWIGIDPYSSSAAAAAGGSA-NVFEKTKYVEESME-DHEEQEIETLPLFP 180
           VVGYRSHNMGSWIGIDPYSS   AAAGGSA NVFEKTKYVEESME DHEEQEIETLPLFP
Sbjct: 121 VVGYRSHNMGSWIGIDPYSS---AAAGGSANNVFEKTKYVEESMEDDHEEQEIETLPLFP 180

Query: 181 IHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM 234
           IHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDD GAAGSRASLELSLNSYATISPDDGM
Sbjct: 181 IHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDD-GAAGSRASLELSLNSYATISPDDGM 235

[Close]

BLAST of Chy2G028460 vs. ExPASy TrEMBL
Match: A0A5A7SHQ2 (Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001370 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.5e-108
Identity = 227/307 (73.94%), Postives = 228/307 (74.27%), Query Frame = 0


Query: 1   MEHPAK---QQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNN 60
           MEHPAK   QQQQEQGI+DQGGEGGGGSNGK GFLCRQSSSRWTPTTDQIRILKELYYNN
Sbjct: 1   MEHPAKQQQQQQQEQGIHDQGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYNN 60

Query: 61  GVRSPSADQIQRISARLRQY---------------------------------------- 120
           GVRSPSADQIQRISARLRQY                                        
Sbjct: 61  GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSNSPITTTTTTT 120

Query: 121 -----------------------------APSSSVMVAVGHMGNYGYGSATFENSFRECS 180
                                        APSSSVMVAVGHMGNYGYGSATFENSFRECS
Sbjct: 121 DHFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECS 180

Query: 181 ISSGGNSSVVGYRSHNMGSWIGIDPYSSSAAAAAGGSA-NVFEKTKYVEESME-DHEEQE 234
           ISSGGNSSVVGYRSHNMGSWIGIDPYSS   AAAGGSA NVFEKTKYVEESME DHEEQE
Sbjct: 181 ISSGGNSSVVGYRSHNMGSWIGIDPYSS---AAAGGSANNVFEKTKYVEESMEDDHEEQE 240

[Close]

BLAST of Chy2G028460 vs. ExPASy TrEMBL
Match: A0A6J1EFK3 (protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.6e-81
Identity = 184/295 (62.37%), Postives = 195/295 (66.10%), Query Frame = 0


Query: 17  QGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 76
           QG E   GSNGKGGF+CRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 9   QGSE--EGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 68

Query: 77  Y----------------------------------------------------------- 136
           Y                                                           
Sbjct: 69  YGKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHHQQQQIPVPKQQQQQQLQSSLIS 128

Query: 137 ------------------APSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVG 196
                              PSSSVMVAVGHMGNYGYGS TFENSFRECSISSGG+SS+VG
Sbjct: 129 SKPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISSGGSSSMVG 188

Query: 197 -YRSHNMGSWIGIDPYSSSAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGD 234
             RSH+MGSWIG+DPYSS A+AA    A VFEKTKYVEESMED EEQEIETLPLFPIH D
Sbjct: 189 SRRSHHMGSWIGVDPYSSPASAA----ATVFEKTKYVEESMED-EEQEIETLPLFPIHDD 248

[Close]

BLAST of Chy2G028460 vs. ExPASy TrEMBL
Match: A0A6J1KQL8 (protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.1e-81
Identity = 183/292 (62.67%), Postives = 195/292 (66.78%), Query Frame = 0


Query: 17  QGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 76
           QG E   GSNGKGGF+CRQSS+RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ
Sbjct: 9   QGNE--EGSNGKGGFVCRQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQ 68

Query: 77  Y----------------------------------------------------------- 136
           Y                                                           
Sbjct: 69  YGKIEGKNVFYWFQNHKARERQKKRFTSSASDHHHHHQQIPVPKQQQQQQLQSSLVSSKP 128

Query: 137 ---------------APSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVG-YR 196
                           PSSSVMVAVGHMGNYGYGS TFENSFRECSISSGG+SS+VG  R
Sbjct: 129 EDSSSSPLFHTKCPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISSGGSSSMVGSRR 188

Query: 197 SHNMGSWIGIDPYSSSAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGDRNN 234
           SH+MGSWIG+DPYSS A+AA    A VFEKTKYVEESME+ EEQEIETLPLFPIH DR +
Sbjct: 189 SHHMGSWIGVDPYSSPASAA----ATVFEKTKYVEESMEE-EEQEIETLPLFPIHDDR-S 248

[Close]

BLAST of Chy2G028460 vs. NCBI nr
Match: KAE8647606.1 (hypothetical protein Csa_003874 [Cucumis sativus])

HSP 1 Score: 465 bits (1196), Expect = 4.11e-165
Identity = 232/233 (99.57%), Postives = 232/233 (99.57%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGY 120
           SPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGY
Sbjct: 61  SPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGY 120

Query: 121 RSHNMGSWIGIDPYSSSAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGDRN 180
           RSHNMGSWIGIDPYSS AAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGDRN
Sbjct: 121 RSHNMGSWIGIDPYSSPAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGDRN 180

Query: 181 NLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM 233
           NLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM
Sbjct: 181 NLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM 233

[Close]

BLAST of Chy2G028460 vs. NCBI nr
Match: XP_016899188.1 (PREDICTED: protein WUSCHEL [Cucumis melo])

HSP 1 Score: 431 bits (1107), Expect = 1.63e-151
Identity = 227/239 (94.98%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1   MEHPAKQQQQ----EQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYN 60
           MEHPAKQQQQ    EQGI+DQGGEGGGGSNGK GFLCRQSSSRWTPTTDQIRILKELYYN
Sbjct: 1   MEHPAKQQQQQQQQEQGIHDQGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYN 60

Query: 61  NGVRSPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSS 120
           NGVRSPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSS
Sbjct: 61  NGVRSPSADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSS 120

Query: 121 VVGYRSHNMGSWIGIDPYSSSAAAAAGGSAN-VFEKTKYVEESMED-HEEQEIETLPLFP 180
           VVGYRSHNMGSWIGIDPYSS   AAAGGSAN VFEKTKYVEESMED HEEQEIETLPLFP
Sbjct: 121 VVGYRSHNMGSWIGIDPYSS---AAAGGSANNVFEKTKYVEESMEDDHEEQEIETLPLFP 180

Query: 181 IHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM 233
           IHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDD GAAGSRASLELSLNSYATISPDDGM
Sbjct: 181 IHGDRNNLGGFCSMKPEYSESYYTTTWYGRSDD-GAAGSRASLELSLNSYATISPDDGM 235

[Close]

BLAST of Chy2G028460 vs. NCBI nr
Match: XP_004134866.1 (protein WUSCHEL [Cucumis sativus])

HSP 1 Score: 433 bits (1114), Expect = 1.67e-151
Identity = 232/304 (76.32%), Postives = 232/304 (76.32%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQY------------------------------------------- 120
           SPSADQIQRISARLRQY                                           
Sbjct: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSTSPITTSNTTTTTT 120

Query: 121 ----------------------------APSSSVMVAVGHMGNYGYGSATFENSFRECSI 180
                                       APSSSVMVAVGHMGNYGYGSATFENSFRECSI
Sbjct: 121 DFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECSI 180

Query: 181 SSGGNSSVVGYRSHNMGSWIGIDPYSSSAAAAAGGSANVFEKTKYVEESMEDHEEQEIET 233
           SSGGNSSVVGYRSHNMGSWIGIDPYSS AAAAAGGSANVFEKTKYVEESMEDHEEQEIET
Sbjct: 181 SSGGNSSVVGYRSHNMGSWIGIDPYSSPAAAAAGGSANVFEKTKYVEESMEDHEEQEIET 240

[Close]

BLAST of Chy2G028460 vs. NCBI nr
Match: KAA0025680.1 (protein WUSCHEL [Cucumis melo var. makuwa] >TYK12555.1 protein WUSCHEL [Cucumis melo var. makuwa])

HSP 1 Score: 400 bits (1028), Expect = 2.00e-138
Identity = 227/307 (73.94%), Postives = 228/307 (74.27%), Query Frame = 0


Query: 1   MEHPAKQQQQ---EQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNN 60
           MEHPAKQQQQ   EQGI+DQGGEGGGGSNGK GFLCRQSSSRWTPTTDQIRILKELYYNN
Sbjct: 1   MEHPAKQQQQQQQEQGIHDQGGEGGGGSNGKSGFLCRQSSSRWTPTTDQIRILKELYYNN 60

Query: 61  GVRSPSADQIQRISARLRQY---------------------------------------- 120
           GVRSPSADQIQRISARLRQY                                        
Sbjct: 61  GVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSNSPITTTTTTT 120

Query: 121 -----------------------------APSSSVMVAVGHMGNYGYGSATFENSFRECS 180
                                        APSSSVMVAVGHMGNYGYGSATFENSFRECS
Sbjct: 121 DHFKISSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECS 180

Query: 181 ISSGGNSSVVGYRSHNMGSWIGIDPYSSSAAAAAGGSAN-VFEKTKYVEESMED-HEEQE 233
           ISSGGNSSVVGYRSHNMGSWIGIDPYSS   AAAGGSAN VFEKTKYVEESMED HEEQE
Sbjct: 181 ISSGGNSSVVGYRSHNMGSWIGIDPYSS---AAAGGSANNVFEKTKYVEESMEDDHEEQE 240

[Close]

BLAST of Chy2G028460 vs. NCBI nr
Match: XP_038883674.1 (protein WUSCHEL isoform X2 [Benincasa hispida])

HSP 1 Score: 348 bits (892), Expect = 9.81e-118
Identity = 201/311 (64.63%), Postives = 212/311 (68.17%), Query Frame = 0


Query: 1   MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
           M+ P  QQQQ+  +NDQ  +G   +NGKGGFLCRQSS+RWTPTTDQIRILKELYYNNGVR
Sbjct: 1   MDLPKHQQQQQ--VNDQ--DGSNNNNGKGGFLCRQSSTRWTPTTDQIRILKELYYNNGVR 60

Query: 61  SPSADQIQRISARLRQY------------------------------------------- 120
           SPSADQIQRISARLRQY                                           
Sbjct: 61  SPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTTASASASSSPTHHHQQ 120

Query: 121 -----------------------------------APSSSVMVAVGHMGNYGYGSATFEN 180
                                              APSSSVMVAVGHMGNYGYGS TF+N
Sbjct: 121 HQFPLPKHQHISSTNNINNWKPHDSSSSSPLFHNKAPSSSVMVAVGHMGNYGYGSPTFDN 180

Query: 181 SFRECSISSGGNSSVVGYRSHNMGSWIGIDPYSSSAAAAAGGSANVFEKTKYVEESMEDH 233
           SFRECSISSGG SSVVGYRSHNMGSWIG+DPYSS  AAAA G ANVFEKTKYVEESMED 
Sbjct: 181 SFRECSISSGGGSSVVGYRSHNMGSWIGVDPYSSPTAAAAAG-ANVFEKTKYVEESMED- 240

[Close]

BLAST of Chy2G028460 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-18
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 0


Query: 1  MEHPAKQQQQEQGINDQGGEGGGGSNGKGGFLCRQSSSRWTPTTDQIRILKELYYNNGVR 60
          ME P  Q    Q  + + G      +G GG+ CRQ+S+RWTPTT+QI+ILKELYYNN +R
Sbjct: 1  MEPPQHQHHHHQA-DQESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIR 60

Query: 61 SPSADQIQRISARLRQY 78
          SP+ADQIQ+I+ARLRQ+
Sbjct: 61 SPTADQIQKITARLRQF 76

[Close]

BLAST of Chy2G028460 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0


Query: 37  SSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 78
           SSRW PT DQ+R+L+EL Y  G R+PSAD IQ+I+A+LR+Y
Sbjct: 74  SSRWNPTPDQLRVLEEL-YRQGTRTPSADHIQQITAQLRRY 113

[Close]

BLAST of Chy2G028460 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-08
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 36 SSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 78
          SSSRW PT DQI +L+ L Y  G+R+PSADQIQ+I+ RLR Y
Sbjct: 11 SSSRWNPTKDQITLLENL-YKEGIRTPSADQIQQITGRLRAY 51

[Close]

BLAST of Chy2G028460 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-05
Identity = 20/39 (51.28%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 39 RWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 78
          RW PT +QI  L+EL Y +G R+P+ +QIQ+I+++LR+Y
Sbjct: 61 RWNPTPEQITTLEEL-YRSGTRTPTTEQIQQIASKLRKY 98

[Close]

BLAST of Chy2G028460 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 21/42 (50.00%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 36 SSSRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 78
          +S+RW PT +Q+ IL+E+ Y +G+R+P+A QIQ+I+A L  Y
Sbjct: 5  ASTRWCPTPEQLMILEEM-YRSGIRTPNAVQIQQITAHLAFY 45

The following BLAST results are available for this feature:

BLAST of Chy2G028460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LL11	5.1e-40	39.58	Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1	[more]
Q6YBV1	1.9e-34	39.38	Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1	[more]
Q84VT7	4.6e-33	36.43	Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1	[more]
Q9SB92	2.7e-17	57.14	Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2	[more]
Q7XM13	1.6e-14	55.00	WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1...	[more]

BLAST of Chy2G028460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH83	6.3e-118	76.32	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505860 PE...	[more]
A0A1S4DTA3	3.1e-117	94.98	protein WUSCHEL OS=Cucumis melo OX=3656 GN=LOC103485357 PE=4 SV=1	[more]
A0A5A7SHQ2	4.5e-108	73.94	Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0013...	[more]
A0A6J1EFK3	1.6e-81	62.37	protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1	[more]
A0A6J1KQL8	2.1e-81	62.67	protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1	[more]

BLAST of Chy2G028460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647606.1	4.11e-165	99.57	hypothetical protein Csa_003874 [Cucumis sativus]	[more]
XP_016899188.1	1.63e-151	94.98	PREDICTED: protein WUSCHEL [Cucumis melo]	[more]
XP_004134866.1	1.67e-151	76.32	protein WUSCHEL [Cucumis sativus]	[more]
KAA0025680.1	2.00e-138	73.94	protein WUSCHEL [Cucumis melo var. makuwa] >TYK12555.1 protein WUSCHEL [Cucumis ...	[more]
XP_038883674.1	9.81e-118	64.63	protein WUSCHEL isoform X2 [Benincasa hispida]	[more]

BLAST of Chy2G028460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17950.1	1.9e-18	57.14	Homeodomain-like superfamily protein	[more]
AT3G18010.1	2.4e-08	63.41	WUSCHEL related homeobox 1	[more]
AT5G59340.1	2.4e-08	64.29	WUSCHEL related homeobox 2	[more]
AT2G01500.1	3.2e-05	51.28	Homeodomain-like superfamily protein	[more]
AT2G28610.1	4.2e-05	50.00	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 38..74 e-value: 1.9E-6 score: 27.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR45940:SF2	PROTEIN WUSCHEL	coord: 6..77
None	No IPR available	PANTHER	PTHR45940:SF2	PROTEIN WUSCHEL	coord: 80..226
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 80..226 coord: 6..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G028460.1	Chy2G028460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity