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Chy2G028150 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGAATAAGCAAAGCCCTTCTGAAAGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTATCCAAACAACCTCTAAGGTCATCATTCCTTTTCGATTCCTTCATTTTCAGTCATTCTCCTCAATCTGTGGTGCATAATTTGGTTTTATTTTCTGTTTTTTCATTAGGTATTGTGAGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTGTAAGTATCACCTTGAATTCTGTAAAAAAAATTGTACTCCGCTATAATTCTTCATCTCTGACCATTTTCTGTTTTCATTATGATTTTCTTTTTCCTTACTAGCTTTCTGGTTCTTCTTTTAGATCATCTAGGGTGCTGTAGCTGGTTTGTTTTATGAAGTATTTCTCAATTTTGCTAGGTTAGGTAGTAAAAATAGTTGTAGGGATCAGCATCCAGTGTTGAAACCTTTGCCTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTTCTCTCCTGTCGGAATGCCATCAATCCATTATCTAGCACTATGAAGGACCGAGCAAGCATAGGGTTCAGGGAGGTATTCGTATCATGTGTTATTACGATTATAAACTAAAGGTTTAGAGTTAGAAATATATATAAACTCTCTAATCTATTGATGCCCCTTTATTATATGATATGAATAAACTGTTCTCTCTTTGCTCAAAGATATAAGTAGCATAATATTAGTGAACTACATGGATCTGTATGTTGATGGTTGTTATTTACGCTTTCTTGTTTTCTTTATTTGTCTGTTTTATAACACCCCTTGTTTAGGGGAGTTAGGTTATAGGACGTCTGTTTGTTGTATGTTGTAATTTTGCATACTGTTGTGTTAGATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGGTGAGGATACTGTTGAGATTACTCGAGAAAAATGAGCACTGTTTTGTTTGGGGGTGGAAGACAGTTTTTATTTCTTGAGCTCAATAATCAGAAGAGATGTCAACATAACGCCACAAAACTTCACACTTGTATTTGTAAGTTTCCACTTTAGAATGAATTGAATGGTTTCATTTTCTCAAACTCGCTGGTGTCGCCCAATAAAATAGGCAGATTAAACCACTTGTCCACAGTTCTTTCTTAGGGTCATTTGAAAATGTTATGGTGGAAACTAAACAAGAGAATATCCTCTAAAATTTTCTGTTCAAAACTTTTGGGCTTGTGCTGAACTATCTGATGGTGATTTGAAAAGTTGCTGGTTTCACCTACCTTTACTCCTTGTTTTACATAACATCAACTCCTTATCCTTTGGCTTTAACATATATTGGAGGCCTTCTTGCCTTAAATTACACTGACCCAATCACTTTGTTTCTTTTTGGGTTCTTAAGAAGTTAAATAACAACATACCACAATCGCAGGTGATTTGATAATTGATAATATTTTTCTTCCATGAGGTGAGGAGAAGGGGGAAACTGGCGGTGTATAGTCACGATAGTTATGGTTATGACTATTACCATTGTTATTATAGTTTTCTACCTTTACCAATTTACTGTTTTTCAAATTGTATAGTTGGCACCATCTCATTGAGTTCTTGATAGTTAAATGGGGGTTGAAGTGTGAAAAACTTGTTGATGGCTTTGCATTCACGCCATCGCAAAAGGCATCAAAGCTGAGTGGCAATATTCAGTTGGCTGAGATTGTTCGCGATTCTGAACCAGTTAAGGTTATGCAATACATTTATATTAATTTTGTGAAACTCTTTTTTTTTTTAGTAGAGCTTCGTAACCTGATTTATGATATTTTACTTGTAGCATGAGACTTCTTGTGTAAAGTGA ATGGTGAGAATAAGCAAAGCCCTTCTGAAAGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTATCCAAACAACCTCTAAGGTATTGTGAGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGTTAAATGGGGGTTGAAGTGTGAAAAACTTGTTGATGGCTTTGCATTCACGCCATCGCAAAAGGCATCAAAGCTGAGTGGCAATATTCAGTTGGCTGAGATTGTTCGCGATTCTGAACCAGTTAAGCATGAGACTTCTTGTGTAAAGTGA ATGGTGAGAATAAGCAAAGCCCTTCTGAAAGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTATCCAAACAACCTCTAAGGTATTGTGAGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGTTAAATGGGGGTTGAAGTGTGAAAAACTTGTTGATGGCTTTGCATTCACGCCATCGCAAAAGGCATCAAAGCTGAGTGGCAATATTCAGTTGGCTGAGATTGTTCGCGATTCTGAACCAGTTAAGCATGAGACTTCTTGTGTAAAGTGA MVRISKALLKEATSGFTNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALKVKWGLKCEKLVDGFAFTPSQKASKLSGNIQLAEIVRDSEPVKHETSCVK* Homology
BLAST of Chy2G028150 vs. ExPASy Swiss-Prot
Match: Q5M8Z2 (Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.9e-11 Identity = 32/71 (45.07%), Postives = 51/71 (71.83%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy Swiss-Prot
Match: Q5U1Z8 (Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy Swiss-Prot
Match: Q96I23 (Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.5e-09 Identity = 26/58 (44.83%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy Swiss-Prot
Match: Q9D1C3 (Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.2e-09 Identity = 25/57 (43.86%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy Swiss-Prot
Match: Q2T9V7 (Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.4e-09 Identity = 25/52 (48.08%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy TrEMBL
Match: A0A5A7SJZ8 (UPF0434 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001030 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy TrEMBL
Match: A0A1S3B2Q6 (UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy TrEMBL
Match: A0A0A0KHC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507170 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy TrEMBL
Match: A0A6J1GDI4 (uncharacterized protein LOC111453193 OS=Cucurbita moschata OX=3662 GN=LOC111453193 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.7e-27 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of Chy2G028150 vs. ExPASy TrEMBL
Match: A0A6J1BW32 (uncharacterized protein LOC111005251 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005251 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.7e-27 Identity = 63/75 (84.00%), Postives = 69/75 (92.00%), Query Frame = 0
BLAST of Chy2G028150 vs. NCBI nr
Match: XP_008440859.1 (PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo] >KAA0025649.1 UPF0434 protein [Cucumis melo var. makuwa] >TYK12522.1 UPF0434 protein [Cucumis melo var. makuwa]) HSP 1 Score: 150 bits (378), Expect = 1.71e-44 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of Chy2G028150 vs. NCBI nr
Match: XP_011658060.1 (uncharacterized protein LOC101219142 [Cucumis sativus] >KGN48943.1 hypothetical protein Csa_003028 [Cucumis sativus]) HSP 1 Score: 148 bits (373), Expect = 9.91e-44 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of Chy2G028150 vs. NCBI nr
Match: XP_038883681.1 (UPF0434 protein Ecaj_0131 [Benincasa hispida]) HSP 1 Score: 137 bits (344), Expect = 2.59e-39 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of Chy2G028150 vs. NCBI nr
Match: KAG6603894.1 (hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135 bits (339), Expect = 3.50e-37 Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Chy2G028150 vs. NCBI nr
Match: XP_022949957.1 (uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 uncharacterized protein LOC111804007 [Cucurbita pepo subsp. pepo] >KAG7034074.1 hypothetical protein SDJN02_03801 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 130 bits (327), Expect = 1.00e-36 Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of Chy2G028150 vs. TAIR 10
Match: AT4G35905.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24 Identity = 51/76 (67.11%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Chy2G028150 vs. TAIR 10
Match: AT1G63855.3 (Putative methyltransferase family protein ) HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12 Identity = 43/93 (46.24%), Postives = 52/93 (55.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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