Chy2G028000 (gene) Cucumber (hystrix) v1

Overview
NameChy2G028000
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionserine/arginine-rich splicing factor SR45a
LocationchrH02: 3204436 .. 3207192 (-)
RNA-Seq ExpressionChy2G028000
SyntenyChy2G028000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGCCGATGTTCATCGCAAAAGGTGAGCTTATGAAATGCTTTGTTGAGATTATTTACTTCTTACGGTTGACGATCTTGGGGTTTTTTGACCTAGGGCACAGAGATGATTTGTGTTGCAGCATTTTTTGTCTCTTCTAGCGTTTAACTTTTGAGTTACCTTTATGAGATTCCGATTAACTAGATTTTAACTCTTCCATTGAAGAAATAATTAGTCCACGAGCTGTGAACATCTTTAGGATGAATCTTATTTCATTCATTTGAGTGGTCTGCTACTAGGTTAAAGGGTCGAGCATTTTCTTGATATACAATTCGTAATTTGTTTTTTTTTTTAGGGTAGTAGTTGGTGGTTGTGATTTTTTTTCTTTCTGGAATGCTATTTTCTTCTTCCAGTCTTGATGTTTGTTGATCTCTTGAAATAGTATATCATCTTTTCTTAAGAAGTCCTATTAGGTAGTACATAAGAAATCAATTTCATTGCAACTATGATTTATATTGATGGAGTTTGAGAGTTTTGGATAATTTTGAGGTTCTTATAGGGTTTTGAATTGGGTCGAGAGCCATGTCAAAGAACTTTGGTCAGTTGAACTTGTACCTATAGTTGTCATTTGAAAATTTGAGCTGTTGATGATTGAGCTTGGAATAATTTCTGGTGATTGAACTTCCCTTGTTAGGTTTTCTTTTTCCATTTTGAACATATTAATTTGTTGGAGTAACTGGCTGTTTTAGTAATTACACCTTAATGGTTAAGGATTATCGAAAGATGGGTGAAGCAGATTATGTGTTTTCCATAATCTATGACATGGCAGTTTAAACATTTATAACATTCAATTTTTTTAGAATATTAGTAATTGTAATGTCTGTAGATTCATGGTGTTAGTAATACTTATGGTTACAAGTAACACAGGTACTCTCGATCTCCTTCCCCCTGGAGAGCTCCTTCAAGATCAAGATCCAGATCTAGATCACGATCGAGGCCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGGTTGGTTTTGATTGTTTTTTATTACTTGGATCAATTGAAAGTATAAACTACTTTTATGTCTGAACTTTGGTATCTTATAACCCTTTTCTTATGGTACATGTTTCTGATTCAGATCAAGGTCCAGAAGTCGTGGGAGGTCAGTTTCTCTAGCTGGAACCCTGGACAAATAATAATGAACACCCTGTTTCAGTGCTTAATTGGGTCTATTCGTGTTGCTTTTCACAGACTGTTTTTGTTTTGATTATCCTTGGTAACATGTTTAGCTTTTTCCAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTTAGCTTCTGCATCCTAATTACTTGCAGTTAATTGGATGATCGTGTGAGAGATCCATAGTTTGTTTATGGCCTGAAAACATACAGCATAAAACAAGATTGTAATATCTAAAAATGTGTAAACAGCATTCATTGACTTCAAGAAACATTAAAATGGAATTTGGATTAGACACCAAATGGCCTAAAGTTATGGTGTTGTCAACTTTTTTTTTTGTTGTTGTAATGCTTACGTTTTGCAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTTACAATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAATCGATTCTAGAAGGTCGATACATAACTGTGGAGAAGGTACTGTGATTGTTCTGATGTGGATATTATTCTAGAATTTCAGTCATTTTCTTTTTTTCTCTTAACTTGGAGGTTTTCTGGTTATATTCAGAACAAGTTTGTGTCAGCTATGTTGGCAGCAATCAAAGATGATGAGTTCATCCATGTCAACTTTAGTGAAACAGCTTGGTCAATGACAAGCTTAAACAACAGATTTCAAATGCGCCTGATCAACTAAACATATCAACTATATTGCCCAACAACTTTTCTTCATCAGCATTCACTTTCAACACAACTAACCAACGGACATTATCAAGAACTTTCTAATCAGGCTTTTATGGTATTTCATGCCTAGCATTCATTGGACACTAGTCAATTTTTCCCAACTCCTGATATCAAGTGCATCCTTTTTTGGTGGCCACTTTCCTCCCATGAATATTTCTTATGAATGGTTCTTTGCCAACAATTTCAAAACTAGTTTTTGCATATAGCGCTCACCTGGAAAACTATACCAACGATAATAACCTCTTCTAATTTAAGATTGGACTAGGACTTAGGTTAATAAAAGAAATGAGATGACACAATTTTTGTCTTTCAGTCACGGAGAAAACGGCCAAGAACTCCAACGCCAGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGTAAGCTCAACCGTAAACATATCTTATGCATTGTAATTTACTCAAACATTACCTGAACTGCATTTGTTGCTTCTTGTATTAGGCTATCGTGGCGATCGAGGTAGTAGGTATCGTGGAAGTGGCTCCTTCCGTGAAGACTATGGGCATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGGTCGCCGCCACCTTACTCCCCTCCTTACGGCGGCAGCCCGGATAGGAGGTATGCCCGTGGCTCTAGGTGA

mRNA sequence

ATGCAGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGAGAGCTCCTTCAAGATCAAGATCCAGATCTAGATCACGATCGAGGCCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTTACAATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAATCGATTCTAGAAGGTCGATACATAACTGTGGAGAAGTCACGGAGAAAACGGCCAAGAACTCCAACGCCAGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTATCGTGGCGATCGAGGTAGTAGGTATCGTGGAAGTGGCTCCTTCCGTGAAGACTATGGGCATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGGTCGCCGCCACCTTACTCCCCTCCTTACGGCGGCAGCCCGGATAGGAGGTATGCCCGTGGCTCTAGGTGA

Coding sequence (CDS)

ATGCAGGCCGATGTTCATCGCAAAAGGTACTCTCGATCTCCTTCCCCCTGGAGAGCTCCTTCAAGATCAAGATCCAGATCTAGATCACGATCGAGGCCCAGGTCCAGGTCCAGATCATGGTCAAGGCCAAGATCCCCAAGTCGTGGAAGATCAAGGTCCAGAAGTCGTGGGAGGGAGCATGCCAACAACCCTGGGAATACGCTTTATGTCACTGGTCTATCTACAAGAGTCACTGAAAGAGACCTTGAAGAGCATTTTTCCAAGGAGGGCAAGGTAGCTTCTTGTTTCCTTGTGGTTGAGCCTCGAACACGGATTTCTCGTGGTTTTGCATTTGTTACAATGGACAATGTAGATGATGCTAATCGGTGTGTTAAGCATCTCAACCAATCGATTCTAGAAGGTCGATACATAACTGTGGAGAAGTCACGGAGAAAACGGCCAAGAACTCCAACGCCAGGACACTATTTGGGGTTGAAAAGCACTAGAGACTCTGGCTATCGTGGCGATCGAGGTAGTAGGTATCGTGGAAGTGGCTCCTTCCGTGAAGACTATGGGCATCGTCGGTCTCCAAGACGCTCACCATATCGAGGGGCTCGTGAATACTCCCCTAGACACTCCCCCCCTTATGGTGGGGGGAGATCAAGGAGGGATCACTCAAGGTCGCCGCCACCTTACTCCCCTCCTTACGGCGGCAGCCCGGATAGGAGGTATGCCCGTGGCTCTAGGTGA

Protein sequence

MQADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFREDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR*
Homology
BLAST of Chy2G028000 vs. ExPASy Swiss-Prot
Match: Q84TH4 (Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR45A PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.6e-34
Identity = 112/233 (48.07%), Postives = 131/233 (56.22%), Query Frame = 0

Query: 20  PSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-------EHANNPGNTLYVTG 79
           P R  +RS      RSR      P    RGRS SRS  R         A NPGN+LYVTG
Sbjct: 22  PLRLENRSPMSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTG 81

Query: 80  LSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSIL 139
           LS RVTERDLE+HF+KEGKV    LV++P TR SRGF F++M +V DANRC++ L+ S+L
Sbjct: 82  LSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVL 141

Query: 140 EGRYITVEKSRRKRPRTPTPGHYLGLKS--------------------TRDSGYRGDRGS 199
           +GR ITVEK+RR+R RTPTPG YLGL++                    +R   Y  DRG 
Sbjct: 142 QGRVITVEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSSDRGR 201

Query: 200 RYRGSGSFREDYGHR-RSPRRSP-YRGAREYSPRHSP-PYGGGRSRRDHSRSP 223
            Y  S      YG R RS   SP YR  R YSP  SP P      RRD S SP
Sbjct: 202 SYSPS------YGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYSP 248

BLAST of Chy2G028000 vs. ExPASy Swiss-Prot
Match: Q3ZBT6 (Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 105/247 (42.51%), Postives = 125/247 (50.61%), Query Frame = 0

Query: 9   RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 68
           R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 69  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 128
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 129 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG 188
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D  
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMG-RPTYGSSRRRDYY 223

Query: 189 SRYRGSGSFREDYGHRRSPR-----RSPYRGARE----YSPRHSPPY---GGGRSR-RDH 226
            R    G    DY + RS R        +R A++    Y  R   PY   GG RSR R  
Sbjct: 224 DRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSR 283

BLAST of Chy2G028000 vs. ExPASy Swiss-Prot
Match: P62995 (Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 105/247 (42.51%), Postives = 125/247 (50.61%), Query Frame = 0

Query: 9   RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 68
           R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 69  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 128
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 129 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG 188
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D  
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMG-RPTYGSSRRRDYY 223

Query: 189 SRYRGSGSFREDYGHRRSPR-----RSPYRGARE----YSPRHSPPY---GGGRSR-RDH 226
            R    G    DY + RS R        +R A++    Y  R   PY   GG RSR R  
Sbjct: 224 DRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSR 283

BLAST of Chy2G028000 vs. ExPASy Swiss-Prot
Match: P62996 (Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 105/247 (42.51%), Postives = 125/247 (50.61%), Query Frame = 0

Query: 9   RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 68
           R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 69  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 128
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 129 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG 188
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D  
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMG-RPTYGSSRRRDYY 223

Query: 189 SRYRGSGSFREDYGHRRSPR-----RSPYRGARE----YSPRHSPPY---GGGRSR-RDH 226
            R    G    DY + RS R        +R A++    Y  R   PY   GG RSR R  
Sbjct: 224 DRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSR 283

BLAST of Chy2G028000 vs. ExPASy Swiss-Prot
Match: P62997 (Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 105/247 (42.51%), Postives = 125/247 (50.61%), Query Frame = 0

Query: 9   RYSRSPSPWRAPSRSRSRSRSRSR-PRSRSRSWSRPRSPSRGRSRSRSRGREHANNPGNT 68
           R SRS S  R+ SRSRSR  SR    RSRSRS S  RS SR  SR   R   H+++P +T
Sbjct: 44  RRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103

Query: 69  ----------------LYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAF 128
                           L V GLS   TERDL E FSK G +A   +V + ++R SRGFAF
Sbjct: 104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAF 163

Query: 129 VTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG 188
           V  +NVDDA    +  N   L+GR I V+ S  KRP TPTPG Y+G + T  S  R D  
Sbjct: 164 VYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMG-RPTYGSSRRRDYY 223

Query: 189 SRYRGSGSFREDYGHRRSPR-----RSPYRGARE----YSPRHSPPY---GGGRSR-RDH 226
            R    G    DY + RS R        +R A++    Y  R   PY   GG RSR R  
Sbjct: 224 DRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSR 283

BLAST of Chy2G028000 vs. ExPASy TrEMBL
Match: A0A1S4DTT1 (serine/arginine-rich splicing factor SR45a OS=Cucumis melo OX=3656 GN=LOC103485170 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.2e-125
Identity = 234/240 (97.50%), Postives = 238/240 (99.17%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 62
           ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HAN
Sbjct: 2   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGRDHAN 61

Query: 63  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 122
           NPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 123 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFRE 182
           CVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRG GSFRE
Sbjct: 122 CVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFRE 181

Query: 183 DYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR 242
           DYG+RRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY RGSR
Sbjct: 182 DYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR 241

BLAST of Chy2G028000 vs. ExPASy TrEMBL
Match: A0A0A0KMM4 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507340 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 236/243 (97.12%), Postives = 238/243 (97.94%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 62
           ADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN
Sbjct: 2   ADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 61

Query: 63  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 122
           NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 123 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR-GDRG-SRYR-GSGS 182
           CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYR GDRG SRYR G GS
Sbjct: 122 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGGS 181

Query: 183 FREDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYAR 242
           FREDYG+RRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY R
Sbjct: 182 FREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPR 241

BLAST of Chy2G028000 vs. ExPASy TrEMBL
Match: A0A6J1INV2 (serine/arginine-rich splicing factor SR45a OS=Cucurbita maxima OX=3661 GN=LOC111478126 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.1e-112
Identity = 227/242 (93.80%), Postives = 230/242 (95.04%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHA 62
           AD HRKRYSRSPSPWRAP  SRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR E+ 
Sbjct: 2   ADSHRKRYSRSPSPWRAP--SRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENV 61

Query: 63  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 122
           NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDAN
Sbjct: 62  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDAN 121

Query: 123 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFR 182
           RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRG GSFR
Sbjct: 122 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRG-GSFR 181

Query: 183 EDYGHRRSPRRSPYRGAREYSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARG 242
           EDYGHRRSPRRSPYRGAREYSPRHS PPYGGGRSRRDHSRS PPYSP  GGSPDRRY RG
Sbjct: 182 EDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRS-PPYSPYGGGSPDRRYPRG 239

BLAST of Chy2G028000 vs. ExPASy TrEMBL
Match: A0A6J1GFF0 (serine/arginine-rich splicing factor SR45a OS=Cucurbita moschata OX=3662 GN=LOC111453689 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.1e-112
Identity = 227/242 (93.80%), Postives = 230/242 (95.04%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHA 62
           AD HRKRYSRSPSPWRAP  SRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR E+ 
Sbjct: 2   ADSHRKRYSRSPSPWRAP--SRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENV 61

Query: 63  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 122
           NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDAN
Sbjct: 62  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDAN 121

Query: 123 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFR 182
           RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRG GSFR
Sbjct: 122 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRG-GSFR 181

Query: 183 EDYGHRRSPRRSPYRGAREYSPRHS-PPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARG 242
           EDYGHRRSPRRSPYRGAREYSPRHS PPYGGGRSRRDHSRS PPYSP  GGSPDRRY RG
Sbjct: 182 EDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRS-PPYSPYGGGSPDRRYPRG 239

BLAST of Chy2G028000 vs. ExPASy TrEMBL
Match: A0A6J1BUT3 (serine/arginine-rich splicing factor SR45a isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005727 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.9e-107
Identity = 221/242 (91.32%), Postives = 225/242 (92.98%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 62
           AD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRS SRGRSRSRSRGR+HA 
Sbjct: 2   ADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRDHAL 61

Query: 63  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 122
           N GNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 62  NTGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 123 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYR-GSGSFR 182
           CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRG RY  G GSFR
Sbjct: 122 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGGRYHGGGGSFR 181

Query: 183 EDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY-ARG 242
           EDYG+RRSPRRSPYRGAREY    SPPY GGRSRR+HSRS PPYSPPY GSPDRRY  RG
Sbjct: 182 EDYGYRRSPRRSPYRGAREY----SPPY-GGRSRREHSRS-PPYSPPY-GSPDRRYPPRG 236

BLAST of Chy2G028000 vs. NCBI nr
Match: XP_016899368.1 (PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo])

HSP 1 Score: 453 bits (1165), Expect = 4.21e-160
Identity = 234/240 (97.50%), Postives = 238/240 (99.17%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 62
           ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HAN
Sbjct: 2   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGRDHAN 61

Query: 63  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 122
           NPGNTLYVTGLSTRVTERDLE+HFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 123 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFRE 182
           CVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRG GSFRE
Sbjct: 122 CVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSFRE 181

Query: 183 DYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGSR 242
           DYG+RRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY RGSR
Sbjct: 182 DYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPRGSR 241

BLAST of Chy2G028000 vs. NCBI nr
Match: XP_031743118.1 (serine/arginine-rich splicing factor SR45a [Cucumis sativus])

HSP 1 Score: 441 bits (1133), Expect = 3.54e-155
Identity = 236/243 (97.12%), Postives = 238/243 (97.94%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 62
           ADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN
Sbjct: 2   ADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 61

Query: 63  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 122
           NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 123 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-DRGS-RYRGSG-S 182
           CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG DRGS RYRG G S
Sbjct: 122 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGGS 181

Query: 183 FREDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYAR 242
           FREDYG+RRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY R
Sbjct: 182 FREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPR 241

BLAST of Chy2G028000 vs. NCBI nr
Match: KAE8647621.1 (hypothetical protein Csa_003197 [Cucumis sativus])

HSP 1 Score: 441 bits (1133), Expect = 2.56e-153
Identity = 236/243 (97.12%), Postives = 238/243 (97.94%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 62
           ADVHRKRYSRSPSPW+APSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN
Sbjct: 2   ADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 61

Query: 63  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 122
           NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 123 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-DRGS-RYRGSG-S 182
           CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG DRGS RYRG G S
Sbjct: 122 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGGGS 181

Query: 183 FREDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYAR 242
           FREDYG+RRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRY R
Sbjct: 182 FREDYGYRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYPR 241

BLAST of Chy2G028000 vs. NCBI nr
Match: XP_038881911.1 (serine/arginine-rich splicing factor SR45a [Benincasa hispida])

HSP 1 Score: 427 bits (1099), Expect = 4.83e-150
Identity = 228/241 (94.61%), Postives = 233/241 (96.68%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHAN 62
           AD HRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR+HA+
Sbjct: 2   ADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGRDHAH 61

Query: 63  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 122
           NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 123 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFRE 182
           CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRD+GYRGDRGSRYRG GSFR+
Sbjct: 122 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDAGYRGDRGSRYRGGGSFRD 181

Query: 183 DYGHRRSPRRSPYRGAREYSP-RHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARGS 242
           DYG+RRSPRRSPYRGAREYSP RHSPPYGG RSRRDHSRSPP   PPYGGSPDRRY RGS
Sbjct: 182 DYGYRRSPRRSPYRGAREYSPPRHSPPYGG-RSRRDHSRSPPYTPPPYGGSPDRRYPRGS 241

BLAST of Chy2G028000 vs. NCBI nr
Match: XP_022950652.1 (serine/arginine-rich splicing factor SR45a [Cucurbita moschata] >XP_022978005.1 serine/arginine-rich splicing factor SR45a [Cucurbita maxima] >XP_023543883.1 serine/arginine-rich splicing factor SR45a [Cucurbita pepo subsp. pepo] >KAG6603882.1 Serine/arginine-rich splicing factor SR45a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409 bits (1052), Expect = 6.53e-143
Identity = 227/242 (93.80%), Postives = 230/242 (95.04%), Query Frame = 0

Query: 3   ADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EHA 62
           AD HRKRYSRSPSPWRAPSRSRSRSRSR  PRSRSRSWSRPRS SRGRSRSRSRGR E+ 
Sbjct: 2   ADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGENV 61

Query: 63  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 122
           NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDAN
Sbjct: 62  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDAN 121

Query: 123 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSFR 182
           RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRG GSFR
Sbjct: 122 RCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRG-GSFR 181

Query: 183 EDYGHRRSPRRSPYRGAREYSPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRRYARG 242
           EDYGHRRSPRRSPYRGAREYSPRHSPP YGGGRSRRDHSRSPP YSP  GGSPDRRY RG
Sbjct: 182 EDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPP-YSPYGGGSPDRRYPRG 239

BLAST of Chy2G028000 vs. TAIR 10
Match: AT4G35785.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 248.4 bits (633), Expect = 5.7e-66
Identity = 162/241 (67.22%), Postives = 179/241 (74.27%), Query Frame = 0

Query: 7   RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREH 66
           R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRGR  
Sbjct: 7   RRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSE 66

Query: 67  ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 126
             NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA
Sbjct: 67  VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDA 126

Query: 127 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSF 186
            RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G R S  RG    
Sbjct: 127 ERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDSDREG-RSS--RGRHYD 186

Query: 187 REDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARG 242
           R+DY  RRSPR       R+YSPR        RSRRD S S      P+G SP+RR  R 
Sbjct: 187 RDDYRDRRSPR-------RDYSPRDE-----RRSRRDRSYS------PHGRSPERRSERR 226

BLAST of Chy2G028000 vs. TAIR 10
Match: AT4G35785.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.8e-64
Identity = 162/241 (67.22%), Postives = 179/241 (74.27%), Query Frame = 0

Query: 7   RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREH 66
           R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRG E 
Sbjct: 7   RRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGSE- 66

Query: 67  ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 126
             NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA
Sbjct: 67  VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDA 126

Query: 127 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGSGSF 186
            RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS   G R S  RG    
Sbjct: 127 ERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDSDREG-RSS--RGRHYD 186

Query: 187 REDYGHRRSPRRSPYRGAREYSPRHSPPYGGGRSRRDHSRSPPPYSPPYGGSPDRRYARG 242
           R+DY  RRSPR       R+YSPR        RSRRD S S      P+G SP+RR  R 
Sbjct: 187 RDDYRDRRSPR-------RDYSPRDE-----RRSRRDRSYS------PHGRSPERRSERR 225

BLAST of Chy2G028000 vs. TAIR 10
Match: AT4G35785.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-46
Identity = 107/141 (75.89%), Postives = 119/141 (84.40%), Query Frame = 0

Query: 7   RKRYSRSPSP--WRAPSRSRSRSRSRSRPRSRSRSWSRPR----SPSRGRSRSRSRGREH 66
           R+R SRSPSP   RA SRSRSRSRSRSRPR RSRS S PR    S SRGRSRSRSRGR  
Sbjct: 7   RRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSE 66

Query: 67  ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 126
             NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+SRGFAFVTM ++ DA
Sbjct: 67  VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDA 126

Query: 127 NRCVKHLNQSILEGRYITVEK 142
            RC+K+LNQS+LEGRYITVE+
Sbjct: 127 ERCIKYLNQSVLEGRYITVER 147

BLAST of Chy2G028000 vs. TAIR 10
Match: AT4G35785.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 107/156 (68.59%), Postives = 119/156 (76.28%), Query Frame = 0

Query: 7   RKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG------------- 66
           R+R SRSPSP   RA SRSRSRSRSRSRP  RSRSRS  RP SPSR              
Sbjct: 7   RRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRILRGNLFFIT 66

Query: 67  ----RSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRI 126
               RSRSRSRG E   NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+
Sbjct: 67  CTLCRSRSRSRGSE-VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRV 126

Query: 127 SRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK 142
           SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Sbjct: 127 SRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 161

BLAST of Chy2G028000 vs. TAIR 10
Match: AT4G35785.5 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 107/156 (68.59%), Postives = 119/156 (76.28%), Query Frame = 0

Query: 7   RKRYSRSPSP--WRAPSRSRSRSRSRSRP--RSRSRSWSRPRSPSRG------------- 66
           R+R SRSPSP   RA SRSRSRSRSRSRP  RSRSRS  RP SPSR              
Sbjct: 7   RRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRILRGNLFFIT 66

Query: 67  ----RSRSRSRGREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRI 126
               RSRSRSRG E   NPG TLYVTGLSTRVT++DLE HF+KEGKVASCFLV+EPRTR+
Sbjct: 67  CTLCRSRSRSRGSE-VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRV 126

Query: 127 SRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK 142
           SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Sbjct: 127 SRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q84TH49.6e-3448.07Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
Q3ZBT63.3e-1842.51Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1[more]
P629953.3e-1842.51Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1[more]
P629963.3e-1842.51Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1[more]
P629973.3e-1842.51Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A1S4DTT17.2e-12597.50serine/arginine-rich splicing factor SR45a OS=Cucumis melo OX=3656 GN=LOC1034851... [more]
A0A0A0KMM43.7e-12197.12RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507340 PE=4 SV... [more]
A0A6J1INV29.1e-11293.80serine/arginine-rich splicing factor SR45a OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GFF09.1e-11293.80serine/arginine-rich splicing factor SR45a OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1BUT38.9e-10791.32serine/arginine-rich splicing factor SR45a isoform X1 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
XP_016899368.14.21e-16097.50PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo][more]
XP_031743118.13.54e-15597.12serine/arginine-rich splicing factor SR45a [Cucumis sativus][more]
KAE8647621.12.56e-15397.12hypothetical protein Csa_003197 [Cucumis sativus][more]
XP_038881911.14.83e-15094.61serine/arginine-rich splicing factor SR45a [Benincasa hispida][more]
XP_022950652.16.53e-14393.80serine/arginine-rich splicing factor SR45a [Cucurbita moschata] >XP_022978005.1 ... [more]
Match NameE-valueIdentityDescription
AT4G35785.25.7e-6667.22RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G35785.11.8e-6467.22RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G35785.31.7e-4675.89RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G35785.41.5e-4268.59RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G35785.51.5e-4268.59RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 67..140
e-value: 5.8E-25
score: 98.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 68..137
e-value: 8.8E-18
score: 63.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 66..144
score: 17.199404
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 5..151
e-value: 4.8E-31
score: 109.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..242
NoneNo IPR availablePANTHERPTHR48034TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATEDcoord: 3..238
NoneNo IPR availablePANTHERPTHR48034:SF11RNA RECOGNITION MOTIFcoord: 3..238
NoneNo IPR availableCDDcd12382RRM_RBMX_likecoord: 65..144
e-value: 9.46672E-39
score: 127.725
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 12..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G028000.1Chy2G028000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding