Chy2G027950 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G027950
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DUF1990 domain-containing protein
Location	chrH02: 3181916 .. 3184924 (-)
RNA-Seq Expression	Chy2G027950
Synteny	Chy2G027950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTCTTGTGTTGGTCTCGCCCGTCTCCTCAAGAGCAGAAGGCCTGCATTGAAAGGCAAGAACAGTAGGATTGTAAACCCCACCCCTCACAAGAAAAAATTTTACACATGAGAGAGATTTTTGTATGGGTGTGAATAATGATCTGGAACTACGAGTATATGAAATCTAACCTCCTGCTTACGTCAAAGTGCACTGTTGCATTAGGGATGGAACATATCTATCATAGCTATCACGATCCTTACTTTTTTCTCCACTCAAGTGCAATATTCACGGTGAAGGCAAAAATGTGAGAGAAATAAGGATCTTAGAGCTACTATAGATAATGCACTTTAATGTAAGTAGAAGAAGGTTAGATTTTATATGTTTTTAAGAGGAGAGGCATTAATCACGTAGGGAATTGAGAATAGGTCTCCGAAAGAAGAACTCCATATATTTATGTTTGTTTGTTTGTTCCTTTTTTCTGAGTGGAGTGTAACATGATGGTGATCAATAGGGCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCCAATCCCAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGGGACTTATGAAAAAGGGAAGAAAGCTCTTCAGCACTGGAGGTTGGCTAATGGCTGATATACTTATTGGATGAAGAGTAATCTATTAGATGAATCCTTTAATCCACCTCAAATTTTTTGTAGGCATTTTGGATTGAATTGGGCATTTGTTGATACCTCAACTCCAGTTCATCCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGTTGCCTCTTCAAATTGTATATGTAAATGAGAATAGAGATACCCATAAGGGTAGGACATGCTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGTTAGTTGTTCCTCCTTCATTTTTCTTCCTCATTTGCTTATTAGATTCCTTGCAGACTACTTATCTTGCAAATCATCAGCCATGGTTGTGAAACTAGAGTTGGGATTTCACAATTATAGCTCAATGGTGTGATTTTAAAGTGTTTAGTCAATGTCTTACCTTGACGACTAGGGTGTATACTCAATTGATTTTTAGATCTGATCTCATGTAGTCGTCAATTTCCTTTCTTAGAGGAATTTTCTCCCTAAAAAGCCACACGACACGACAAGGTTAAAGGTCATATTTTTAAAATCTAGGCCACAGACACAGGAAGAACACAATGATTAAAATATACATTTTAAAAAATGTGTCATTTTTATGCAAGAATGAAATTCAAGTCAGTTATGCATTTCTATGGTTTAAAAAATGTAGTTTGATGTATTCATGATGCATGTCTAACAAATATTGAACATACTTAGATTGTGTACCATTAATAACTAACGTCTATTGCATAAACAAGCGTTTGATATGTATCCAACAAGGATTATAGTGTCAGTGCTTCCTAGGTTTTTCTTATAGATCAGGTACCAACTTACAATATTTAGTCCATGCACACTAAAGTATCAAATCTTTAACCAAGTTTCTCTCTTTGTACACATATAAGAAGTAGAGACTTCTATTAAGAACAAGATCGCAGTCTGTCCCCAAAATTCCTAAAAACTTCACTCAGACTATCTGCATCTTCTTAGACAACACAATCCACCATTCATTCTTCCAAGCTAAAAACTTTTTAATCTCACTCTAGATCCTTTAAATGTACTAACATGTTCCTAAACTTTCATAATTTCAGGCTGGTGAAGAACGGTTTTCAATCGAGATGGACTCAAACAGTCAAGTATGGTATGAAATTCTATCATTCTCAAAGCCTGCCCACATATTATCATTCCTAAGTTATCCCTACGTAATTCTTCGCCAAAAGTATTTTGCTCATCAATCTACAAACGCACTTAAGAAATATTTGTCTCCCACTCATTCCTAACTTCTGCTATGTATTGTAATCTATACTTAGATTGTTTCTTCCTGTAAGTGTAAGCATTCAGTCCTTAGATAATGATAACATTGGTATACCTCTCAACTATCACTATACTCGAATGAACTCTGTCATGATCATTCATGTTTCAAGTTAGAAAAGAAAATTTGTAAATTTTGAGAATATTTTATCACTAGCTACCACTGTTTTGAGTCACTCATGGAAAAACGAAAAACCAATTAAAAAAAACCACTTAAACCAACCGAAACTGCTCGTCATTTCAGATTGAAATCAGTCAGATTGGCGGTCTCAGGTTTGACCAAAAAATTTTGAAAAACCAAACCAATTGATATAATATATATATATATTGCACACTTTAAGCATCACCCCTTTTTTCAAAATGCATATCTGCCAGGTTTGTGAGTAGCTACTTGTACGCTTGAGGTTGTGAGTTTATATCGGGGGAGGTCAATATTTTATTTTCGAACTGTTGGTCCGAGCAGTTCAGGTGATGTGATTTCTTGTTGAGTCCAGGTTTAATTCTAGTTTACAATATTTCTTAGTCGATTAATTGTTTTAAGGTTTGATTTTCTAAAAAATCAAACTGCTTACATCATTAATTCGAGTTTGTATTAATGATGATTTTTCTGTTTTTCTTTAGTTTTTTTGTTTTTGTTTTGGTGAGAAACTAATGTGTGTAGTGTACAATCTCTTCGTTGGTGATCTTTTTTCCTTGAATTTATGAAACATAAAAAATGGAGCAGAGTTTCAAAAACTATATTAAATTATCCTCACGTAACGTCCACATCCTCTACTCTTTCTTCACTCATCTTTCTACTCTCTTTGGTTTTTCTTTGCCCACTTCCTTTTTTGATTTCTTTCCCATCTAAACCCTAAACAAGTTTGTCTCTTTTTTCCTGCTAAAGTACCAAAAAAAAGTATATTCCACATTACTTTCCAAGGTTATATTATATTGTTTTCTTTTCAAGGTTACAACATTGACTACACATTACTTTCGACCAATACTCCACAATTCCGCTGAATGA

mRNA sequence

ATGGTGTTCTTGTGTTGGTCTCGCCCGTCTCCTCAAGAGCAGAAGGCCTGCATTGAAAGGCAAGAACAGGCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCCAATCCCAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGGGACTTATGAAAAAGGGAAGAAAGCTCTTCAGCACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATACCTCAACTCCAGTTCATCCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGTTGCCTCTTCAAATTGTATATGTAAATGAGAATAGAGATACCCATAAGGGTAGGACATGCTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCTGGTGAAGAACGGTTTTCAATCGAGATGGACTCAAACAGTCAAGTTACAACATTGACTACACATTACTTTCGACCAATACTCCACAATTCCGCTGAATGA

Coding sequence (CDS)

ATGGTGTTCTTGTGTTGGTCTCGCCCGTCTCCTCAAGAGCAGAAGGCCTGCATTGAAAGGCAAGAACAGGCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCCAATCCCAGTTCTTGCCTGCAAGAAGATAAGGGGATCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGGGACTTATGAAAAAGGGAAGAAAGCTCTTCAGCACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATACCTCAACTCCAGTTCATCCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGTTGCCTCTTCAAATTGTATATGTAAATGAGAATAGAGATACCCATAAGGGTAGGACATGCTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCTGGTGAAGAACGGTTTTCAATCGAGATGGACTCAAACAGTCAAGTTACAACATTGACTACACATTACTTTCGACCAATACTCCACAATTCCGCTGAATGA

Protein sequence

MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQIVYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLTTHYFRPILHNSAE*

Homology

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BLAST of Chy2G027950 vs. ExPASy Swiss-Prot
Match: Q8GXB1 (UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-57
Identity = 100/174 (57.47%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFL W RPS ++Q+  I +    G+FNY +K+RG ++   + L+ED  I ++GFL+NHA
Sbjct: 1   MVFLSWGRPSSEQQQQVINK---TGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           R+LVGSG  +YEKGKKALQ+W+HFG++WAFVD +TPV  G KFC+C KE LPWV+LPLQ+
Sbjct: 61  RVLVGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQV 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLTTHYFRP 175
           VYV+E+R + KG   F +GSGTLQGHLLAGEE+FSIE+D N +V    T + +P
Sbjct: 121 VYVDESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKP 171

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BLAST of Chy2G027950 vs. ExPASy Swiss-Prot
Match: Q9RST8 (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAF---VDTSTPV-HPGVKFCVCAKEFLPW--- 120
           R+ VG G   +E+ K AL+  + F  +W      + STP+   G    +  + F PW   
Sbjct: 47  RVRVGEGEACWERAKAALRGGQMF-QDWVLRPHGEASTPLSRQGATVVLLVRHFGPWGRR 106

Query: 121 -----VVLPLQIVYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLT 177
                 ++  +++Y+ +  D       + FG GTL GHL+ GEERF +E D+   V    
Sbjct: 107 KWGLYSLMTNRVLYLVDEPDR------YGFGYGTLPGHLVRGEERFLLERDAGGAVWFDL 166

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BLAST of Chy2G027950 vs. ExPASy TrEMBL
Match: A0A1S3B2T0 (UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 156/164 (95.12%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSPQEQKACIER   AGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA
Sbjct: 1   MVFLCWSRPSPQEQKACIER---AGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVVLPLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 165
           VYVNENR+T+KGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV
Sbjct: 121 VYVNENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 161

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BLAST of Chy2G027950 vs. ExPASy TrEMBL
Match: A0A0A0KKV8 (DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 157/165 (95.15%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDK-GISQEGFLLNH 60
           MVFLCWSRPSPQEQKACIER   AGSFNY+SKFRGATANPSSCLQEDK GISQEGFLLNH
Sbjct: 1   MVFLCWSRPSPQEQKACIER---AGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNH 60

Query: 61  ARILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQ 120
           ARILVGSGVGTYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVVLPLQ
Sbjct: 61  ARILVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQ 120

Query: 121 IVYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 165
           IVYVNENRDT+KGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV
Sbjct: 121 IVYVNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 162

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BLAST of Chy2G027950 vs. ExPASy TrEMBL
Match: A0A6J1IMP9 (UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.3e-83
Identity = 149/164 (90.85%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSPQEQK CI+R   +GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHA
Sbjct: 1   MVFLCWSRPSPQEQKTCIDR---SGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVV+PLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 165
           VYVNENR T+  RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV
Sbjct: 121 VYVNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 161

[Close]

BLAST of Chy2G027950 vs. ExPASy TrEMBL
Match: A0A6J1GGC4 (UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.3e-83
Identity = 149/164 (90.85%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSPQEQK CI+R   +GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHA
Sbjct: 1   MVFLCWSRPSPQEQKTCIDR---SGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVV+PLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 165
           VYVNENR T+  RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV
Sbjct: 121 VYVNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 161

[Close]

BLAST of Chy2G027950 vs. ExPASy TrEMBL
Match: A0A6J1CKD3 (UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.2e-78
Identity = 141/164 (85.98%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSP E KACI+R   +GSFNYSSKFRGATANPSS L+EDKG+ QEGFLLNHA
Sbjct: 1   MVFLCWSRPSPLEHKACIDR---SGSFNYSSKFRGATANPSSSLKEDKGLQQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPV+PGVKFCVC+KEFLPWVV+PLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVNPGVKFCVCSKEFLPWVVMPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 165
           VYVNENRD    RTCFSFGSGTLQGHLLAGEERFSIEMD N+QV
Sbjct: 121 VYVNENRDAKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNNQV 161

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BLAST of Chy2G027950 vs. NCBI nr
Match: XP_008440884.1 (PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: UPF0548 protein At2g17695 [Cucumis melo])

HSP 1 Score: 327 bits (838), Expect = 7.34e-112
Identity = 156/164 (95.12%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSPQEQKACIER   AGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA
Sbjct: 1   MVFLCWSRPSPQEQKACIER---AGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVVLPLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 164
           VYVNENR+T+KGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV
Sbjct: 121 VYVNENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 161

[Close]

BLAST of Chy2G027950 vs. NCBI nr
Match: XP_004134836.1 (UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical protein Csa_003747 [Cucumis sativus])

HSP 1 Score: 327 bits (837), Expect = 1.08e-111
Identity = 158/175 (90.29%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKG-ISQEGFLLNH 60
           MVFLCWSRPSPQEQKACIER   AGSFNY+SKFRGATANPSSCLQEDKG ISQEGFLLNH
Sbjct: 1   MVFLCWSRPSPQEQKACIER---AGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNH 60

Query: 61  ARILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQ 120
           ARILVGSGVGTYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVVLPLQ
Sbjct: 61  ARILVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQ 120

Query: 121 IVYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLTTHYFRP 174
           IVYVNENRDT+KGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV      + +P
Sbjct: 121 IVYVNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKP 172

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BLAST of Chy2G027950 vs. NCBI nr
Match: KAG6603877.1 (UPF0548 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316 bits (810), Expect = 3.49e-108
Identity = 149/164 (90.85%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSPQEQK CI+R   +GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHA
Sbjct: 1   MVFLCWSRPSPQEQKTCIDR---SGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVV+PLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 164
           VYVNENR T+  RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV
Sbjct: 121 VYVNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 161

[Close]

BLAST of Chy2G027950 vs. NCBI nr
Match: XP_038883220.1 (UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548 protein At2g17695 isoform X1 [Benincasa hispida])

HSP 1 Score: 317 bits (813), Expect = 4.73e-108
Identity = 152/174 (87.36%), Postives = 158/174 (90.80%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSPQ+QKACIER   AGSFNYSSKFRGATANPS+CLQED GISQEGFLLNHA
Sbjct: 1   MVFLCWSRPSPQDQKACIER---AGSFNYSSKFRGATANPSTCLQEDNGISQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVVLPLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLTTHYFRP 174
           VYVNENRDT K  TCFSFGSGTL GHLLAGEERFSIEMDSNSQV      + +P
Sbjct: 121 VYVNENRDTKKAGTCFSFGSGTLHGHLLAGEERFSIEMDSNSQVWYEILSFSKP 171

[Close]

BLAST of Chy2G027950 vs. NCBI nr
Match: XP_038883222.1 (UPF0548 protein At2g17695 isoform X2 [Benincasa hispida])

HSP 1 Score: 317 bits (812), Expect = 5.65e-108
Identity = 151/164 (92.07%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFLCWSRPSPQ+QKACIER   AGSFNYSSKFRGATANPS+CLQED GISQEGFLLNHA
Sbjct: 1   MVFLCWSRPSPQDQKACIER---AGSFNYSSKFRGATANPSTCLQEDNGISQEGFLLNHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           RILVGSGV TYEKGKKALQ+WRHFGLNWAFVD+STPVHPGVKFCVCAKEFLPWVVLPLQI
Sbjct: 61  RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQI 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQV 164
           VYVNENRDT K  TCFSFGSGTL GHLLAGEERFSIEMDSNSQV
Sbjct: 121 VYVNENRDTKKAGTCFSFGSGTLHGHLLAGEERFSIEMDSNSQV 161

[Close]

BLAST of Chy2G027950 vs. TAIR 10
Match: AT2G17695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 224.2 bits (570), Expect = 8.7e-59
Identity = 100/174 (57.47%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFL W RPS ++Q+  I +    G+FNY +K+RG ++   + L+ED  I ++GFL+NHA
Sbjct: 1   MVFLSWGRPSSEQQQQVINK---TGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           R+LVGSG  +YEKGKKALQ+W+HFG++WAFVD +TPV  G KFC+C KE LPWV+LPLQ+
Sbjct: 61  RVLVGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQV 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLTTHYFRP 175
           VYV+E+R + KG   F +GSGTLQGHLLAGEE+FSIE+D N +V    T + +P
Sbjct: 121 VYVDESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKP 171

[Close]

BLAST of Chy2G027950 vs. TAIR 10
Match: AT2G17695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 224.2 bits (570), Expect = 8.7e-59
Identity = 100/174 (57.47%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFL W RPS ++Q+  I +    G+FNY +K+RG ++   + L+ED  I ++GFL+NHA
Sbjct: 1   MVFLSWGRPSSEQQQQVINK---TGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           R+LVGSG  +YEKGKKALQ+W+HFG++WAFVD +TPV  G KFC+C KE LPWV+LPLQ+
Sbjct: 61  RVLVGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQV 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLTTHYFRP 175
           VYV+E+R + KG   F +GSGTLQGHLLAGEE+FSIE+D N +V    T + +P
Sbjct: 121 VYVDESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKP 171

[Close]

BLAST of Chy2G027950 vs. TAIR 10
Match: AT2G17695.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960). )

HSP 1 Score: 224.2 bits (570), Expect = 8.7e-59
Identity = 100/174 (57.47%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 1   MVFLCWSRPSPQEQKACIERQEQAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHA 60
           MVFL W RPS ++Q+  I +    G+FNY +K+RG ++   + L+ED  I ++GFL+NHA
Sbjct: 1   MVFLSWGRPSSEQQQQVINK---TGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHA 60

Query: 61  RILVGSGVGTYEKGKKALQHWRHFGLNWAFVDTSTPVHPGVKFCVCAKEFLPWVVLPLQI 120
           R+LVGSG  +YEKGKKALQ+W+HFG++WAFVD +TPV  G KFC+C KE LPWV+LPLQ+
Sbjct: 61  RVLVGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQV 120

Query: 121 VYVNENRDTHKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVTTLTTHYFRP 175
           VYV+E+R + KG   F +GSGTLQGHLLAGEE+FSIE+D N +V    T + +P
Sbjct: 121 VYVDESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKP 171

The following BLAST results are available for this feature:

BLAST of Chy2G027950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXB1	1.2e-57	57.47	UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1	[more]
Q9RST8	1.7e-06	29.69	UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 2053...	[more]

BLAST of Chy2G027950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2T0	1.3e-86	95.12	UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1	[more]
A0A0A0KKV8	2.2e-86	95.15	DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=...	[more]
A0A6J1IMP9	2.3e-83	90.85	UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1	[more]
A0A6J1GGC4	2.3e-83	90.85	UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=...	[more]
A0A6J1CKD3	2.2e-78	85.98	UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV...	[more]

BLAST of Chy2G027950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440884.1	7.34e-112	95.12	PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: U...	[more]
XP_004134836.1	1.08e-111	90.29	UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical ...	[more]
KAG6603877.1	3.49e-108	90.85	UPF0548 protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038883220.1	4.73e-108	87.36	UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548...	[more]
XP_038883222.1	5.65e-108	92.07	UPF0548 protein At2g17695 isoform X2 [Benincasa hispida]	[more]

BLAST of Chy2G027950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17695.1	8.7e-59	57.47	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.2	8.7e-59	57.47	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G17695.3	8.7e-59	57.47	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018960	Domain of unknown function DUF1990	PFAM	PF09348	DUF1990	coord: 51..174 e-value: 8.5E-28 score: 97.4
None	No IPR available	PANTHER	PTHR34202	UPF0548 PROTEIN	coord: 1..170
None	No IPR available	PANTHER	PTHR34202:SF1	UPF0548 PROTEIN	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G027950.1	Chy2G027950.1	mRNA