Chy2G025710 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G025710
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RNA polymerase II transcription factor B subunit 2
Location	chrH02: 1990471 .. 1997395 (+)
RNA-Seq Expression	Chy2G025710
Synteny	Chy2G025710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCTCAGGTCCTTGCTTTCCATTCTTAAATGCTTTCATTCGTTGGGGTCGTATTTATCATTGAAACCACTGAGCTTGCTTGTTCGTAATACGATGCATTGAAACTGTTTTTTAAAAAAATTGATTGAGGTGTTTTTTTTATAATTATTTTATAATTAGTTGTTTTTTTCATTTTTCCTTGGCCAAAGTTAGGTATTTGCGAATGAATTTAACTTAATAGTAGCTAGTCAATCATAGTTTTGGAGGTTATAATTTACAAGAGTGCCGATCATCTTTTGTAATCAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTTTCAGCCAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCAAAGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCAGATAGGTGCTATTCTCTTCCCACATTTTCTTAAGAATTTGATACCTTTTCACAATTCTTCAAAAATGCATTCTTAGTTAAATAAATCCAAGAAAGCTGTCATTCAAGAGTTCAAGAGTAAGGCTACGTTTGTGGAGTGTTATTTTGTTATTATTTTTATCTTCATCTTCTTTGCGGATGTTTCTTTCCAAGAGTTGATAGATTGCCTTCGTGTTCATAATTCAAATTACGATATCACGATATCATCAGAGTTGAGAGGTTCCTGCCAGGAGAACTTTAATTATGAGCTTGTTGTGCAATATGTAAATGCTTTTGCGTTACTTCTGTTTTGATTTCACTTAAATCGTTTGTAATTCTATCAGCAGTTTTGCATTGTTTGTAGTCCTCAACCCATTCCTATATTGTAATCTTTTCTGTGAATCCCTATTTTACTTATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACTTTCCAAGCAAACCTCCAAAAGCTTTTAATACATGGGTAAGTTTTCTCTCAACTTTGCTCAATGAATGCATTTCTAAACAAGATATGCTAGGATGGATACATGATTTGTCTCATTTCCTTTCTACCCACCACAGACGTTCTGATGCATGAATCTTTCTCAATAAATGCACATTTTCTTTTACTTGCTCCCTTATTTACATTCATTAAGTTCAAGTAGATGATTACTTATTTTCTTTAAAAAGAAGCTGACCCTGGAGTTTAGACTCCATGATTTTAACATTTCAAAGTGATTTACTCTTGGTTTAGAAAATGACAATGAATTTGGGATCTTGCAGTGAAGTTCTAGCCAGAGAACCTATGCCATCAAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTCGAGGCTTATGCTCTGGATCAGTGGGAGGTTGGACAGTCATCAAAATGATTTTAATAATCTGTTTTTTAGTTGCATCTTTTCTAGTTTAGTCTTTGGCTAGTATTGATTCCATCCTCTTAGAATCAATCTAAGGCAACCATCTTCTAAGTTGATTACTGTCCAAGTTTTAACTGTGGATATTCTTTTGACTTGTTATTGTCTTAGTTCAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTTGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGTTAAAATCTTGTTCAATGTACTCTAGCTTTATGTATTGCAATGTATCTGATAAAATGTTATGTATGGTATTCTAGGGATAAAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGGTATGAATCACATGAACCATAGACTTTTTGAAATCCTCATTGATCTGACTCACCAGGGATTCTTGTGATATGTAAACTTCAGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAATGCTGAGGTTTGTGTTTTCCTTTTTTATTGTCATAGCCTATTGCCTTCCTCCAAGGTGTATATATATATATATATAAATTCTATTTCTGTCATTAGTTTTCTATTTGAATCTGAATAAGGGATGGGACTACTGTAACTCATAATGAAAAGCAACTATTGTTAATTTTAAGACCCTTTTCTTTCGTTGTACTGGACTGTATAATTTATTTATTTATTTATTTTCTTCTTATAACTCGTACTCCTCTCCTGTAAATGCATGCTTAATCAATATGGTTCAGGAGCGAGGTGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCACGTGACAGGAGAGGTATCAATTCCTTGAATTTCTTTGTACATCTTTATCTTTTATTGTTGTTGTCTTCTTTTATCCCATCGTAGAACTCTCTTTTAAGTTTTGTTGCTTCACATCATTTTAATACTGAACTACTTTGGATTGGTTCGGGAGTGTATATATGTATATGTATATGTATATGTATATTTTAACACAGATTGGTTTTCTTTAGTTCGTTATATTGTGCATCTATCCTAATTTACCTTTTCTTGTTTATGGCAAGGTTGAATTTGATTGGAATTTTATCAATAATTTTTTTCATTTATACAATGTCTGTCATTCTTGTTTTACAAGTTTCTGTGTTCTAGAAACTAAACAAAGGGGTTTAGTTCTGTTTCCCTCCATCATAAGGGTGAATAAGTGTATTAGTTATGGAGAATATAGTACAAGTATAGTTAAGGCATCAACCCAATTAAGAACCACTGGGATTATTATAAATTCCTCCCATTGACATTCACAAATAAGAATAATAAATGTGTTTAGTTTGATCGTCTTACACAATCATCTTTCCTTCTAAATTTATCCTTAAAATCTCTGCAGTTCCTTTCATCAACGTTTGCGGCATCGTGGTCAAGTTTCCATATTTCTTGTGCATGTGATGCACAAGGAGAGAAGAATCATATGGCTTTTTCTTTGAGAAAGCTTGGCTTGTATTAATCCCCTTCATAACATGATGCAAAATGAAAAATCTAATTTTCTTTGGGTTTCCATACCTCCACTTCAGGTAACCTTAAACAAGTTACTACTCTGTTGGTTAAGAACGGCAGTAATTTCAAGTCTAGAGTTAGTCCAAACTCCATCTCAATCTGTTAGGTTGCCATTTTGGACTGTGGTTCTATTTCAATCTTTTAGTTCCTCTAATTCCAGCAGGCAGCTAACTCTTCATTTTAAAAACTAGGCAATTGAATTCTGAAGAAAACTTGCTTTAGAGGAATATTGTACTTTTATGGATTATGGAGGTTTGTCCGTTGCCAATTTTGAAGGAAAAAGCTCCTAATTCTTTTTGCTCATTACCACAAACTTCCAAGGACTGCTGCTTCTCATTTTTTTTATGGTGAACAAATAGATGTAAATCAAATTAGACTCAAGTGCTAAATTTCTCTCCTTCAGACTGCCTTCTCCAATTCCACGCTCTTATGGTAGTTAGACTCCTTCCTCCAATCAGCTAAATGGCTGGCATTGTCAATACTCTCTCTGGCCCATAGGAGGTTTCTCAACATACTCTCTAAAAGCTTAGCCACTTGGATTTTCAATAAATACATCAAATAAATAGGCATACTCAACATTGTAAATTGCAATAAGGAGGTAAGCCTTTCCCCGTCAGACATAAAGGCACTTACGTGCATTTTTTCTTTGTGAAACCTCTGGAACTGATTTTGGTTCAATTTCCATAGCTCCAAGTGGGAATTAACCTTTTTACAAATTCTGCCCTTTGAAATTTCAGTAAGAAATAAAAAATAAAAAAGAAACAAACTAGGGATGCCATAATCCATTCAACCTACACATGCCCTAAATGTGTTCTACTTTCACCATAGGCAATTTTTGGATATTCCATTGGGAACCTTTTGTACCCTGATTTTGATTGGGCTAATCCCTCTCTTCCATCTCTTAATCAATAACAGATGCACATTAAACCTCTGATAACTATAGTAAATACAGTATAATCCATATTACTAACTTTTATAAAAATAATCCCTATATTATTTACTATCCAATGACCAACATGTTTCTTCTTGGTCTGTAGGCTTATGATATTGATACACTATCAGATGAACAGAGGTATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGTTTTCGGCTAGCCTCTGCTGCTTTTTAAATCGAACACGACCTTTGCTCAAAGTTTTACTTTATTTTAACTTCACCTTTTTCTTCTTCTGTTGTTCCTTTCGTTGATTTGTCCAGGGTAGAAAAGAGAGTTGGTTCATTCCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCCTCTTCAAGGAAACTGGTGAGTGTTTCTGAATGCAAATTATATTTAAATTTGGTATATTTCTATTCAGTTTCATTTTCTTTATGCTTACCAAGTTTTGAGGGGGTGTTTGGCTCTCGAAGTTGGAGTTAAGAGAGTGTTTGTGCCCAAGGAAAACGTGGATCCCACAAACTAAAAAACCACCAATTTCATGCATAATTAACGTCTTATATTACGAGCCCCACGACTTTACAACTCATCAGATTTCACAACTCCACTCTTGGTCTCAAACACTCCCTTAGTGTTTTGCGTGTTTTCGATGATTGCTTTTCCATAACTATTTTTTAGTTTTACACTCTGCTATATATTCGCCTCTCGTTACTTATGTAAATTTTATTTGATAGAACCTTTTTTCTGCTATTAAATAATTCGATTGAGTGATTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGTGGGAGGGGGCTGATTCTCAGTTTCGAGGCTCTATGAAGTTGTTTGCTCATTCTAATTTTCTTTTGTTCTATGACCAGGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGTATATGCCATCATTTAATGTTAATTACATTATATAACCAATGCTTTTGTAAGGAAAATTTATAGACACGACCTACACAATATTTATCTTACAAGTCACTTTGACAATTTTATTTATTTATTTTTGGAAAACAACAACTTTCATTGAGAAAAAATGGAATATAAGGGCATACAAAAAAAGCAAGCCCACAAAAAGGGATCCTCTATCCTCAAAAAGTGACCCCAGTTATGTGTAACAATGCCTATAGAAAAGATACAAAAGTTTGTCGAAATTGACGTCCACAAAATAAATGCAAGCGAACGAGGGACTAAATCTCACAAGTGTCCCTTTCTCAAAAGCCCTAATATTCTGCTCACTCCACACAAAACCTATAAGATTGTACACCCAACAAACCATAAAAAGCAACCCTTCTCCCTGTGAGACGAATTGAGGAGGAACTCCTCGATCATAGCATGAGCACTTGTGAGGGAGCAAGATACCAAACGTTGGAAAGAATAAGGCCCAAACAGAACTTGAAACTCACGAAGTGCAAGAATATGGTCTAGATATTCTAGTGCATTTTGACAAAGAATGCAATAGAAAGGGCCAACAAGTAAGGGCAACGTCCTCACAAGCTGATCCATAATGTTAGCACGACCATGTAAAACTTGCCGAGTAAAGAACCTCATTTTCCTAGGGATCTTAATTCTCTAAATAACTGAAAAATCGACTCTCCTAAGGGAGAAGAATCGACCAAACTTCAAAAAAGGATTTCCACCAAAACCTCTCCAAAGAATTGGGTATCCAAACCGTCACGCCCCTTCTCCCAAGCCTCAAGGAGTGACCCTTGAGCAGAGAAAGAAGAATGACTATGTTTGTTGTTTCCCTATTAGAAAGAAAGGTGGAACCTGAAAATAAAAAAACCAAAGCTCCCAGACCCACATGAGGGTTAAGTAGTTGTTTCGTAAGAATAGTCGAAGGGATACAAGCTGGCTCAAATTTCAAGGGATTAAGAAAGCTTTACAAAATTGACTGGCTACTGGTTACATTTAATATTTACATCATAAGCTAAATGTATTTGAATTCCCACCCCTGATAGGCCCCTCGTGAAACTTCACATATGTTGGGAGGAAGAAAGAGGGGCAAGCTGAGGGATAACTTAGTCATTAGCATTGCTTCTTGAGAGTGCAAGCAACTAGTGATAATTTGTTAATGATAATTCAACGGTTATAATGCTATACTTGAGTAAATTAGAAATGCTGCTTTTTTTATCTAAATATAATTCTCTCACTTTTGTGTCAAATGTTTACCACGGATTCGTTTTAGTTTGATTGTGATAGGAATGCTATTGGGAAGTAGTTGGAGTAAGGGCATATTAGCAATTATTTAAGAAGTTTATTGGGAAAGTTTGGTTATAAATAGTGAATAGAGAAGAAGGAAAATAAACAAGATTCTGTAGCTCGGGAATATTTTTAAGATTGGGAGGGTCTAAGTTGGTTTATCTTGCTATTCCATTATTATTTTTCATTAGACTTGGGTTCAAATTGTTAAAGGTCCATTTTTTTAATTGCATTCTTACAGAAGCACTTGTAATAGTTGATTAAAAAGGAAAAATGATTTTAGTTCAACGTTCTACATTTTACCTACTGCTTGATGAATGCAGTTATTTCCCTTTCTGTTGAATGGAACCATATAATGCAGCAGTCTAAACACAGACATCAACTTTCTATATGGTTCAAGAATTACAAACGAAGCTGTCCTTCTGCAGGATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCAGAGCAGGCAAGTTTTCTGCTTGTTCACCCTGCCTCATGTTACTCTGAGTCTTGTGAAGTAAGGGTACCACTATATTATGTTCAAATTGCCAATGGAATGCAGTAG

mRNA sequence

ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCTCAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTTTCAGCCAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCAAAGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACTTTCCAAGCAAACCTCCAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCTATGCCATCAAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTCGAGGCTTATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTTGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATAAAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAATGCTGAGGAGCGAGGTGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCACGTGACAGGAGAGGCTTATGATATTGATACACTATCAGATGAACAGAGGTATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAGAGTTGGTTCATTCCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCCTCTTCAAGGAAACTGGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCAGAGCAGGCAAGTTTTCTGCTTGTTCACCCTGCCTCATGTTACTCTGAGTCTTGTGAAGTAAGGGTACCACTATATTATGTTCAAATTGCCAATGGAATGCAGTAG

Coding sequence (CDS)

ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCTCAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTTTCAGCCAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCAAAGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACTTTCCAAGCAAACCTCCAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCTATGCCATCAAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTCGAGGCTTATGCTCTGGATCAGTGGGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTTGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATAAAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAATGCTGAGGAGCGAGGTGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCACGTGACAGGAGAGGCTTATGATATTGATACACTATCAGATGAACAGAGGTATGCTATCAAGGACCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAGAGTTGGTTCATTCCTACTAAATTAGCCACAAATCTTTCAATGAGTTTGGCAGATTCCTCTTCAAGGAAACTGGGATTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCAGAGCAGGCAAGTTTTCTGCTTGTTCACCCTGCCTCATGTTACTCTGAGTCTTGTGAAGTAAGGGTACCACTATATTATGTTCAAATTGCCAATGGAATGCAGTAG

Protein sequence

MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASFLLVHPASCYSESCEVRVPLYYVQIANGMQ*

Homology

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BLAST of Chy2G025710 vs. ExPASy Swiss-Prot
Match: Q680U9 (General transcription and DNA repair factor IIH subunit TFB2 OS=Arabidopsis thaliana OX=3702 GN=TFB2 PE=2 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 4.0e-159
Identity = 288/379 (75.99%), Postives = 324/379 (85.49%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
             MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
            REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + I SS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASFLL 360
           +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q    L
Sbjct: 301 METNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFL 360

Query: 361 ---VHPASCYSESCEVRVP 377
               HP       C  RVP
Sbjct: 361 QQNSHP------RCADRVP 373

[Close]

BLAST of Chy2G025710 vs. ExPASy Swiss-Prot
Match: Q92759 (General transcription factor IIH subunit 4 OS=Homo sapiens OX=9606 GN=GTF2H4 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-50
Identity = 123/368 (33.42%), Postives = 202/368 (54.89%), Query Frame = 0


Query: 3   QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKS 62
           +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   +
Sbjct: 11  RVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAA 70

Query: 63  MEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQ-KLLIHGEVLA 122
           +  WV  +     + +   L  LR++             LNP F+ NL+  LL  G+  +
Sbjct: 71  VALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWS 130

Query: 123 REPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLL-S 182
            +            +  L+ YA ++WE  L  ++ S  A    ++   +    Q GL+ S
Sbjct: 131 DDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLS---QAGLMKS 190

Query: 183 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 242
               E P +T +GFQFLL++T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+
Sbjct: 191 TEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGK 250

Query: 243 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGF 302
            Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Sbjct: 251 DYSVEGMSDSLLNFLQHLREFGLV-FQRKRKSRRYYPTRLAINLSSGVSGAGGTVHQPGF 310

Query: 303 VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASF 362
           +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q   
Sbjct: 311 IVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIH 370

Query: 363 LL---VHP 364
            L    HP
Sbjct: 371 FLRTRAHP 374

[Close]

BLAST of Chy2G025710 vs. ExPASy Swiss-Prot
Match: P60027 (General transcription factor IIH subunit 4 OS=Pan troglodytes OX=9598 GN=GTF2H4 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-50
Identity = 123/368 (33.42%), Postives = 202/368 (54.89%), Query Frame = 0


Query: 3   QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKS 62
           +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   +
Sbjct: 11  RVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAA 70

Query: 63  MEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQ-KLLIHGEVLA 122
           +  WV  +     + +   L  LR++             LNP F+ NL+  LL  G+  +
Sbjct: 71  VALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWS 130

Query: 123 REPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLL-S 182
            +            +  L+ YA ++WE  L  ++ S  A    ++   +    Q GL+ S
Sbjct: 131 DDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLS---QAGLMKS 190

Query: 183 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 242
               E P +T +GFQFLL++T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+
Sbjct: 191 TEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGK 250

Query: 243 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGF 302
            Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Sbjct: 251 DYSVEGMSDSLLNFLQHLREFGLV-FQRKRKSRRYYPTRLAINLSSGVSGAGGTVHQPGF 310

Query: 303 VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASF 362
           +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q   
Sbjct: 311 IVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIH 370

Query: 363 LL---VHP 364
            L    HP
Sbjct: 371 FLRTRAHP 374

[Close]

BLAST of Chy2G025710 vs. ExPASy Swiss-Prot
Match: O70422 (General transcription factor IIH subunit 4 OS=Mus musculus OX=10090 GN=Gtf2h4 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-50
Identity = 122/362 (33.70%), Postives = 199/362 (54.97%), Query Frame = 0


Query: 9   KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVL 68
           +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV 
Sbjct: 18  RNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALWVK 77

Query: 69  PDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQ-KLLIHGEVLAREPMPS 128
            +     + +   L  LR++             LNP F+ NL+  LL  G+  + +    
Sbjct: 78  KEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPVFRQNLRIALLGGGKAWSDDTSQL 137

Query: 129 NITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLL-SQRDKEA 188
                   +  L+ YA ++WE  L  ++ S  A    ++   +    Q GL+ S    E 
Sbjct: 138 GPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLS---QAGLMKSTEPGEP 197

Query: 189 PRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDT 248
           P +T +GFQFLL++T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ 
Sbjct: 198 PCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGKDYSVEG 257

Query: 249 LSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKLGFVVVETN 308
           +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Sbjct: 258 MSDSLLNFLQHLREFGLV-FQRKRKSRRYYPTRLAINLSSGVSGAGGTVHQPGFIVVETN 317

Query: 309 FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASFLL---V 364
           +R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q    L    
Sbjct: 318 YRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRA 375

[Close]

BLAST of Chy2G025710 vs. ExPASy Swiss-Prot
Match: Q6CLR2 (General transcription and DNA repair factor IIH subunit TFB2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TFB2 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.4e-48
Identity = 118/373 (31.64%), Postives = 194/373 (52.01%), Query Frame = 0


Query: 13  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGV 72
           D +  LP     +LYE+   C AI R L P+AK F++ ML+ D  VS + +++WV PD  
Sbjct: 12  DYLEGLPEQVQSRLYESPATCLAIYRLLSPMAKFFIMSMLFQDHDVSLRDLDKWVKPDAK 71

Query: 73  SKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVLAREPMPSNITVR 132
            + + ++  +  L + IE  + K+    RLNP F+ + + +L  GE+       ++    
Sbjct: 72  YQLQYSIKSMKSLNLIIE-GESKQPLLIRLNPIFKKSFKNVLTGGEINNSFGDVADDDTN 131

Query: 133 LPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLSQRDKEAPRLTES 192
             S   L+ Y+ ++WE  L  ++ +     P      +++    GL+ + +    ++T  
Sbjct: 132 PVSTATLDQYSAEKWETILHYMVGTPNTNTPGGKVLDLLQ--HSGLMEEAEYGELKITNQ 191

Query: 193 GFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQR 252
           GFQFLL + NAQ+W ++ +Y+  AE   +DP D+++F+  L     G+AY  D LS+ QR
Sbjct: 192 GFQFLLQDVNAQMWTLLLQYLKMAESLQMDPVDVLNFIFMLGALQLGKAYKCDQLSNTQR 251

Query: 253 YAIKDLADLGLVKLQQGRKESWFIPTKLATNL--------SMSLA-DSSSRKL------- 312
             ++D+ D GL+  Q     + F PT+LAT L        S S+A DS   K        
Sbjct: 252 TMLQDMRDYGLI-YQNQSDYAKFYPTRLATLLTSDTKAFRSASVALDSVLNKANETTAVE 311

Query: 313 --------------GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKES 356
                         G +++ETNF++Y+YS+S L   IL LF  ++ +  N++ G +T+ES
Sbjct: 312 GDSGQDETTERTQDGALIIETNFKLYSYSNSPLQIAILSLFVHLKSRFANMVTGQLTRES 371

[Close]

BLAST of Chy2G025710 vs. ExPASy TrEMBL
Match: A0A0A0KK55 (RNA polymerase II transcription factor B subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_6G517270 PE=3 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.1e-195
Identity = 352/355 (99.15%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 356
           VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355

[Close]

BLAST of Chy2G025710 vs. ExPASy TrEMBL
Match: A0A5D3CNX3 (RNA polymerase II transcription factor B subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007400 PE=3 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.4e-194
Identity = 352/355 (99.15%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEV+
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVV 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRK GFVV
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 356
           VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355

[Close]

BLAST of Chy2G025710 vs. ExPASy TrEMBL
Match: A0A6J1IIT5 (RNA polymerase II transcription factor B subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111477843 PE=3 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 4.1e-191
Identity = 343/355 (96.62%), Postives = 352/355 (99.15%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLIHGEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIHGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKE PRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 356
           VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 355

[Close]

BLAST of Chy2G025710 vs. ExPASy TrEMBL
Match: A0A5A7UBE2 (RNA polymerase II transcription factor B subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003070 PE=3 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 9.2e-191
Identity = 353/380 (92.89%), Postives = 353/380 (92.89%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 181 Q-------------------------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISN 240
           Q                         RDKEAPRLTESGFQFLLMETNAQLWYIIREYISN
Sbjct: 181 QRLKSCSMYSSLYFARYLIKCYVWYSRDKEAPRLTESGFQFLLMETNAQLWYIIREYISN 240

Query: 241 AEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF 300
           AEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF
Sbjct: 241 AEERGVDPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF 300

Query: 301 IPTKLATNLSMSLADSSSRKLGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV 356
           IPTKLATNLSMSLADSSSRK GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV
Sbjct: 301 IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIV 360

[Close]

BLAST of Chy2G025710 vs. ExPASy TrEMBL
Match: A0A6J1EGA7 (RNA polymerase II transcription factor B subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111433104 PE=3 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.5e-188
Identity = 340/355 (95.77%), Postives = 349/355 (98.31%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYIDAPV+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYGNAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLI GEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIQGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKE PRLTESGFQFLLMETNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 356
           VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 355

[Close]

BLAST of Chy2G025710 vs. NCBI nr
Match: XP_004134713.1 (general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus] >KGN49219.1 hypothetical protein Csa_003950 [Cucumis sativus])

HSP 1 Score: 686 bits (1769), Expect = 3.02e-246
Identity = 352/355 (99.15%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDGPVSA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355
           VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 VETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355

[Close]

BLAST of Chy2G025710 vs. NCBI nr
Match: TYK13130.1 (RNA polymerase II transcription factor B subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 685 bits (1767), Expect = 1.02e-245
Identity = 352/355 (99.15%), Postives = 353/355 (99.44%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEV+
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVV 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRK GFVV
Sbjct: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355
           VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355

[Close]

BLAST of Chy2G025710 vs. NCBI nr
Match: XP_038882460.1 (general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida])

HSP 1 Score: 675 bits (1742), Expect = 3.90e-242
Identity = 346/355 (97.46%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA
Sbjct: 1   MPQVKIIAKNFMDMVASLPPMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNP FQANLQKLLIHGEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPMFQANLQKLLIHGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPANITVRLPSLEELKAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTL+DEQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Sbjct: 241 AYDIDTLTDEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355
           VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Sbjct: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355

[Close]

BLAST of Chy2G025710 vs. NCBI nr
Match: XP_022977542.1 (RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima])

HSP 1 Score: 673 bits (1737), Expect = 2.25e-241
Identity = 343/355 (96.62%), Postives = 352/355 (99.15%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLIHGEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIHGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKE PRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355
           VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 355

[Close]

BLAST of Chy2G025710 vs. NCBI nr
Match: XP_023543805.1 (RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 671 bits (1730), Expect = 2.62e-240
Identity = 342/355 (96.34%), Postives = 351/355 (98.87%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVTA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
           KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTY+LNPTFQANLQKLLIHGEVL
Sbjct: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYKLNPTFQANLQKLLIHGEVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
           AREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNI SSVMKVFQKGLLS
Sbjct: 121 AREPMPSNITVRLPNLEELEAYALDQWECFLLQLINSGQADKPSNISSSVMKVFQKGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDKE PRLTESGFQFLLMETNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGE
Sbjct: 181 QRDKETPRLTESGFQFLLMETNAQLWYIIREYISNAEERDVDPADLISFLLELSFHVTGE 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Sbjct: 241 AYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ 355
           VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q
Sbjct: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAQQ 355

[Close]

BLAST of Chy2G025710 vs. TAIR 10
Match: AT4G17020.2 (transcription factor-related )

HSP 1 Score: 562.4 bits (1448), Expect = 2.9e-160
Identity = 288/379 (75.99%), Postives = 324/379 (85.49%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
             MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
            REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + I SS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASFLL 360
           +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q    L
Sbjct: 301 METNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFL 360

Query: 361 ---VHPASCYSESCEVRVP 377
               HP       C  RVP
Sbjct: 361 QQNSHP------RCADRVP 373

[Close]

BLAST of Chy2G025710 vs. TAIR 10
Match: AT4G17020.1 (transcription factor-related )

HSP 1 Score: 562.4 bits (1448), Expect = 2.9e-160
Identity = 288/379 (75.99%), Postives = 324/379 (85.49%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
             MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
            REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + I SS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASFLL 360
           +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q    L
Sbjct: 301 METNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFL 360

Query: 361 ---VHPASCYSESCEVRVP 377
               HP       C  RVP
Sbjct: 361 QQNSHP------RCADRVP 373

[Close]

BLAST of Chy2G025710 vs. TAIR 10
Match: AT4G17020.3 (transcription factor-related )

HSP 1 Score: 562.4 bits (1448), Expect = 2.9e-160
Identity = 288/379 (75.99%), Postives = 324/379 (85.49%), Query Frame = 0


Query: 1   MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSA 60
           MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A
Sbjct: 1   MPQVKIIAKNFMDMVASLPAIKLDKLYNNVFICEAILRSLPPLAKKYVLQMLYIDVPVPA 60

Query: 61  KSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPTFQANLQKLLIHGEVL 120
             MEEWVL DG SK++VA+DRLIQLR+F E +DRKR T+Y LNPTFQ NLQK +I G VL
Sbjct: 61  TMMEEWVLADGTSKHRVAIDRLIQLRIFSEISDRKRGTSYSLNPTFQNNLQKHIISGGVL 120

Query: 121 AREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNICSSVMKVFQKGLLS 180
            REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + I SS+MK+FQ+GLLS
Sbjct: 121 PREPMNSDNAIKLPSLQELETYALKQWECFLLQLINSGQGEKLTGISSSMMKIFQRGLLS 180

Query: 181 QRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE 240
           QRDK+ PRLTESGFQFLLM+TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+
Sbjct: 181 QRDKDGPRLTESGFQFLLMDTNAQLWYIIREYILNAEERDVDPADLISFLLELSFHVTGQ 240

Query: 241 AYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKLGFVV 300
           AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK GFVV
Sbjct: 241 AYNLNTLTEVQNNTLKDLADLGLVKLQQGRKDSWFIPTKLATNLSVSLADSSARKEGFVV 300

Query: 301 VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQASFLL 360
           +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q    L
Sbjct: 301 METNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYNAFDNGITSDQIITFL 360

Query: 361 ---VHPASCYSESCEVRVP 377
               HP       C  RVP
Sbjct: 361 QQNSHP------RCADRVP 373

The following BLAST results are available for this feature:

BLAST of Chy2G025710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q680U9	4.0e-159	75.99	General transcription and DNA repair factor IIH subunit TFB2 OS=Arabidopsis thal...	[more]
Q92759	1.4e-50	33.42	General transcription factor IIH subunit 4 OS=Homo sapiens OX=9606 GN=GTF2H4 PE=...	[more]
P60027	1.4e-50	33.42	General transcription factor IIH subunit 4 OS=Pan troglodytes OX=9598 GN=GTF2H4 ...	[more]
O70422	1.8e-50	33.70	General transcription factor IIH subunit 4 OS=Mus musculus OX=10090 GN=Gtf2h4 PE...	[more]
Q6CLR2	8.4e-48	31.64	General transcription and DNA repair factor IIH subunit TFB2 OS=Kluyveromyces la...	[more]

BLAST of Chy2G025710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK55	8.1e-195	99.15	RNA polymerase II transcription factor B subunit 2 OS=Cucumis sativus OX=3659 GN...	[more]
A0A5D3CNX3	1.4e-194	99.15	RNA polymerase II transcription factor B subunit 2 OS=Cucumis melo var. makuwa O...	[more]
A0A6J1IIT5	4.1e-191	96.62	RNA polymerase II transcription factor B subunit 2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A5A7UBE2	9.2e-191	92.89	RNA polymerase II transcription factor B subunit 2 OS=Cucumis melo var. makuwa O...	[more]
A0A6J1EGA7	1.5e-188	95.77	RNA polymerase II transcription factor B subunit 2 OS=Cucurbita moschata OX=3662...	[more]

BLAST of Chy2G025710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134713.1	3.02e-246	99.15	general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis...	[more]
TYK13130.1	1.02e-245	99.15	RNA polymerase II transcription factor B subunit 2 [Cucumis melo var. makuwa]	[more]
XP_038882460.1	3.90e-242	97.46	general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Beninca...	[more]
XP_022977542.1	2.25e-241	96.62	RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]	[more]
XP_023543805.1	2.62e-240	96.34	RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy2G025710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17020.2	2.9e-160	75.99	transcription factor-related	[more]
AT4G17020.1	2.9e-160	75.99	transcription factor-related	[more]
AT4G17020.3	2.9e-160	75.99	transcription factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004598	Transcription factor TFIIH subunit p52/Tfb2	PFAM	PF03849	Tfb2	coord: 14..356 e-value: 1.9E-103 score: 346.2
IPR004598	Transcription factor TFIIH subunit p52/Tfb2	PANTHER	PTHR13152	TFIIH, POLYPEPTIDE 4	coord: 5..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G025710.1	Chy2G025710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000439	transcription factor TFIIH core complex
cellular_component	GO:0005675	transcription factor TFIIH holo complex
molecular_function	GO:0001671	ATPase activator activity
molecular_function	GO:0003690	double-stranded DNA binding