Chy2G025500 (gene) Cucumber (hystrix) v1

Overview
NameChy2G025500
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH02: 1849402 .. 1849835 (+)
RNA-Seq ExpressionChy2G025500
SyntenyChy2G025500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCATAGCATACAAGGCTTGGGTGACAAGAACCAGGCTCTCCTTACTAAGTGGATTTAGAGATATTATCACGAAGAATAGGCATTATGGAGACAATAAAATTAAGAAACAACTTAGACCCTGGGATTTCAATTGGGAGGAAGTAAATCACTTGATGTGTACCTAAAACTCTCAACCCCACTCTAATCTTTTCTAGGAATGTTCAAAAGACTGATGACCCGACAAAACCTCAACCCAACCTAGCCCATTCTCTTCTTTAATGCAATTAATATAAGCTGCGGTTGACATCTATAGCTCAAGTTAGGCAATGGAAGAATGCCATTGGCGACTTCAAAAGCCATTCCTATCAACCACGAAACCTTTGTCAAAATCAGATTGAGAAGCTTGTTTGAGCAATCAACTAATGCAATTTGCCAAAAACCCAAATAA

mRNA sequence

ATGGAGGCCATAGCATACAAGGCTTGGGTGACAAGAACCAGGCTCTCCTTACTAAGTGGATTTAGAGATATTATCACGAAGAATAGGCATTATGGAGACAATAAAATTAAGAAACAACTTAGACCCTGGGATTTCAATTGGGAGGAACTCAAGTTAGGCAATGGAAGAATGCCATTGGCGACTTCAAAAGCCATTCCTATCAACCACGAAACCTTTGTCAAAATCAGATTGAGAAGCTTGTTTGAGCAATCAACTAATGCAATTTGCCAAAAACCCAAATAA

Coding sequence (CDS)

ATGGAGGCCATAGCATACAAGGCTTGGGTGACAAGAACCAGGCTCTCCTTACTAAGTGGATTTAGAGATATTATCACGAAGAATAGGCATTATGGAGACAATAAAATTAAGAAACAACTTAGACCCTGGGATTTCAATTGGGAGGAACTCAAGTTAGGCAATGGAAGAATGCCATTGGCGACTTCAAAAGCCATTCCTATCAACCACGAAACCTTTGTCAAAATCAGATTGAGAAGCTTGTTTGAGCAATCAACTAATGCAATTTGCCAAAAACCCAAATAA

Protein sequence

MEAIAYKAWVTRTRLSLLSGFRDIITKNRHYGDNKIKKQLRPWDFNWEELKLGNGRMPLATSKAIPINHETFVKIRLRSLFEQSTNAICQKPK*
Homology
[Close]
BLAST of Chy2G025500 vs. ExPASy TrEMBL
Match: A0A0A0KK79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518010 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.6e-40
Identity = 84/94 (89.36%), Postives = 87/94 (92.55%), Query Frame = 0 

Query: 1  MEAIAYKAWVTR-TRLSLLSGFRDIITKNRHYGDNKIKKQLRPWDFNWEELKLGNGRMPL 60
          MEAIAYKAWVTR TRLSLLSGFRDII KNRHYG+N I+KQLRPWD NWEELKLGNG+MPL
Sbjct: 1  MEAIAYKAWVTRTTRLSLLSGFRDIIKKNRHYGENTIEKQLRPWDSNWEELKLGNGKMPL 60

Query: 61 ATSKAIPINHETFVKIRLRSLFEQSTNAICQKPK 94
            SKAIPINHETFVKIRLRSLFEQSTNAI QKPK
Sbjct: 61 VNSKAIPINHETFVKIRLRSLFEQSTNAIYQKPK 94

[Close]
BLAST of Chy2G025500 vs. NCBI nr
Match: KGN49244.1 (hypothetical protein Csa_004144 [Cucumis sativus])

HSP 1 Score: 172 bits (436), Expect = 8.99e-54
Identity = 84/94 (89.36%), Postives = 87/94 (92.55%), Query Frame = 0 

Query: 1  MEAIAYKAWVTRT-RLSLLSGFRDIITKNRHYGDNKIKKQLRPWDFNWEELKLGNGRMPL 60
          MEAIAYKAWVTRT RLSLLSGFRDII KNRHYG+N I+KQLRPWD NWEELKLGNG+MPL
Sbjct: 1  MEAIAYKAWVTRTTRLSLLSGFRDIIKKNRHYGENTIEKQLRPWDSNWEELKLGNGKMPL 60

Query: 61 ATSKAIPINHETFVKIRLRSLFEQSTNAICQKPK 93
            SKAIPINHETFVKIRLRSLFEQSTNAI QKPK
Sbjct: 61 VNSKAIPINHETFVKIRLRSLFEQSTNAIYQKPK 94

The following BLAST results are available for this feature:
BLAST of Chy2G025500 vs.
Match NameE-valueIdentityDescription
BLAST of Chy2G025500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK793.6e-4089.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518010 PE=4 SV=1[more]
BLAST of Chy2G025500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49244.18.99e-5489.36hypothetical protein Csa_004144 [Cucumis sativus][more]
BLAST of Chy2G025500 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy2G025500.1Chy2G025500.1mRNA