Chy2G024330 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G024330
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chrH02: 1171702 .. 1172499 (-)
RNA-Seq Expression	Chy2G024330
Synteny	Chy2G024330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTCTACAATGGCTCTTTCCTCCCCAACTCTGGCCGGCCAAGCCGTGAAACTCTCCCCCAATGCCCCTGAAATTCAGGGCAATGCAAAATTCACCATGAGGAAGACTGCCAGCAAGTCAGTTTCCTCCGGCAGCCCGTGGTATGGTCCTGACCGTGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCACCGTCCTACCTTACTGGAGAGTTCCCTGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGTTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCTGAGCTTTTGTCTCGCAATGGTGTGAAGTTTGGTGAAGCTGTTTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGGCTTGACTACTTGGGCAACCCCAGCTTGGTCCATGCTCAGAGCATTTTGGCCATCTGGGCTTGCCAGGTTGTGTTGATGGGTGCCGTCGAGGGTTACCGTATTGCTGGCGGCCCACTCGGAGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGTTGAAGAATGGAAGGTTGGCTATGTTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCTTTGGAAAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCATATGCCACAAACTTTGTTCCCGGAAAGTGA

mRNA sequence

ATGGCTGCCTCTACAATGGCTCTTTCCTCCCCAACTCTGGCCGGCCAAGCCGTGAAACTCTCCCCCAATGCCCCTGAAATTCAGGGCAATGCAAAATTCACCATGAGGAAGACTGCCAGCAAGTCAGTTTCCTCCGGCAGCCCGTGGTATGGTCCTGACCGTGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCACCGTCCTACCTTACTGGAGAGTTCCCTGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGTTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCTGAGCTTTTGTCTCGCAATGGTGTGAAGTTTGGTGAAGCTGTTTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGGCTTGACTACTTGGGCAACCCCAGCTTGGTCCATGCTCAGAGCATTTTGGCCATCTGGGCTTGCCAGGTTGTGTTGATGGGTGCCGTCGAGGGTTACCGTATTGCTGGCGGCCCACTCGGAGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGTTGAAGAATGGAAGGTTGGCTATGTTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCTTTGGAAAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCATATGCCACAAACTTTGTTCCCGGAAAGTGA

Coding sequence (CDS)

ATGGCTGCCTCTACAATGGCTCTTTCCTCCCCAACTCTGGCCGGCCAAGCCGTGAAACTCTCCCCCAATGCCCCTGAAATTCAGGGCAATGCAAAATTCACCATGAGGAAGACTGCCAGCAAGTCAGTTTCCTCCGGCAGCCCGTGGTATGGTCCTGACCGTGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCACCGTCCTACCTTACTGGAGAGTTCCCTGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGTTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCTGAGCTTTTGTCTCGCAATGGTGTGAAGTTTGGTGAAGCTGTTTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGGCTTGACTACTTGGGCAACCCCAGCTTGGTCCATGCTCAGAGCATTTTGGCCATCTGGGCTTGCCAGGTTGTGTTGATGGGTGCCGTCGAGGGTTACCGTATTGCTGGCGGCCCACTCGGAGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGTTGAAGAATGGAAGGTTGGCTATGTTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCTTTGGAAAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCATATGCCACAAACTTTGTTCCCGGAAAGTGA

Protein sequence

MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK*

Homology

[Close]

BLAST of Chy2G024330 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 4.0e-150
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 11  PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70
           PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 190
           FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWAYATNFVPGK 266
           NNNAWAYATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of Chy2G024330 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 7.3e-144
Identity = 247/267 (92.51%), Postives = 257/267 (96.25%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTAS--KSVSSGSPWYGPDRVKYL 60
           MAASTMALSSP+ AG+AVKLSP++ EI GN K TMRKTAS  K+VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Chy2G024330 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 9.5e-144
Identity = 242/265 (91.32%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSP+ AGQAVKLSP+APEI GN + +MRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. ExPASy Swiss-Prot
Match: P07370 (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-142
Identity = 242/265 (91.32%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSP+ AGQAVKLSP+A EI GN + TMRK  +KS  S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 3.1e-142
Identity = 244/264 (92.42%), Postives = 254/264 (96.21%), Query Frame = 0


Query: 2   AASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPF 61
           AAS+MALSSP+LAG+AVKL P+APE+    + +MRKT +K VSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLADPVNNNAWAYATNFVPGK 266
           LADHLA PVNNNAWAYATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Chy2G024330 vs. ExPASy TrEMBL
Match: A0A0A0KKK7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G522680 PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 7.6e-152
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. ExPASy TrEMBL
Match: A0A0A0KI21 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G522690 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.4e-150
Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAAS MALSSPTLAGQAVKLSP APEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. ExPASy TrEMBL
Match: A0A5D3CNU3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008830 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.3e-148
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+AVKLSPNAPEIQG  + TMRKTA+KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. ExPASy TrEMBL
Match: A0A1S3AZZ0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484386 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.3e-148
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+AVKLSPNAPEIQG  + TMRKTA+KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. ExPASy TrEMBL
Match: A0A5A7UBM9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008840 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.9e-147
Identity = 256/265 (96.60%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+AVKLSPNAPEIQG  + TMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLSDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. NCBI nr
Match: XP_011658281.1 (chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucumis sativus] >KGN49374.1 hypothetical protein Csa_003318 [Cucumis sativus])

HSP 1 Score: 545 bits (1403), Expect = 1.34e-195
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. NCBI nr
Match: XP_004134608.2 (chlorophyll a-b binding protein of LHCII type 1 [Cucumis sativus] >KGN49375.1 hypothetical protein Csa_004082 [Cucumis sativus])

HSP 1 Score: 540 bits (1392), Expect = 6.37e-194
Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAAS MALSSPTLAGQAVKLSP APEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. NCBI nr
Match: XP_008439659.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA0052561.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa] >TYK13265.1 chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 533 bits (1373), Expect = 5.02e-191
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+AVKLSPNAPEIQG  + TMRKTA+KSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. NCBI nr
Match: XP_038882053.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 531 bits (1367), Expect = 4.13e-190
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+AVKLSPNAPEIQGN + +MRKTASKSVSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRISMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy2G024330 vs. NCBI nr
Match: P08221.1 (RecName: Full=Chlorophyll a-b binding protein of LHCII type I, chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor [Cucumis sativus] >AAA33124.1 chlorophyll a/b-binding protein, partial [Cucumis sativus])

HSP 1 Score: 530 bits (1365), Expect = 5.76e-190
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 11  PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70
           PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 190
           FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWAYATNFVPGK 265
           NNNAWAYATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of Chy2G024330 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 483.0 bits (1242), Expect = 1.5e-136
Identity = 234/266 (87.97%), Postives = 246/266 (92.48%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP L G+AVKLSP A E+ G  + TMRK +  +  SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLADPVNNNAWAYATNFVPGK 266
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Chy2G024330 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 479.2 bits (1232), Expect = 2.2e-135
Identity = 234/267 (87.64%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP  AG+AVKLSP A E+ G+ + TMRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Chy2G024330 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 477.2 bits (1227), Expect = 8.3e-135
Identity = 233/267 (87.27%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP  AG+AV LSP A E+ G+ + TMRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Chy2G024330 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 477.2 bits (1227), Expect = 8.3e-135
Identity = 233/267 (87.27%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP  AG+AV LSP A E+ G+ + TMRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Chy2G024330 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-133
Identity = 232/267 (86.89%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVS-SGSPWYGPDRVKYLG 60
           MA+STMALSSP  AG+AVK  P A ++ G+ + TMRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Chy2G024330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08221	4.0e-150	100.00	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P27495	7.3e-144	92.51	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27493	9.5e-144	91.32	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P07370	1.4e-142	91.32	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P09756	3.1e-142	92.42	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]

BLAST of Chy2G024330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK7	7.6e-152	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A0A0KI21	1.4e-150	99.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5D3CNU3	2.3e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3AZZ0	2.3e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UBM9	1.9e-147	96.60	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Chy2G024330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658281.1	1.34e-195	100.00	chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucumis sativus]...	[more]
XP_004134608.2	6.37e-194	99.25	chlorophyll a-b binding protein of LHCII type 1 [Cucumis sativus] >KGN49375.1 hy...	[more]
XP_008439659.2	5.02e-191	97.36	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo] >KAA00...	[more]
XP_038882053.1	4.13e-190	96.98	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
P08221.1	5.76e-190	100.00	RecName: Full=Chlorophyll a-b binding protein of LHCII type I, chloroplastic; Sh...	[more]

BLAST of Chy2G024330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	1.5e-136	87.97	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	2.2e-135	87.64	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	8.3e-135	87.27	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	8.3e-135	87.27	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	1.6e-133	86.89	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 1.0E-49 score: 169.2
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 4.2E-91 score: 306.3
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G024330.1	Chy2G024330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding