Chy2G024300 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G024300
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transcription factor bHLH144
Location	chrH02: 1161585 .. 1163406 (-)
RNA-Seq Expression	Chy2G024300
Synteny	Chy2G024300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTTGAGGAAATTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGCCAGGTAAACCACTCTTCATATTTTACACTCCGGTGCTTTGTTTGCTGTTTACACTTCACAATACACATTTGAAGCGCCTGAATTTTGATGTTGTTAGTTGTCTCTTTGCTCGTGAAAAATATCTGTCAACATCAAAGTTAAAATGATCAAGTACTTTCTCCTTAGCTCCTATTTTTTCTCCAGCCTTTCTCCAAGTAGCTATAGTTAACAAATAATAAGTAATGACGAGGGGAGTTTTTACTTGCAACAATATTCTAGATACTGGTATTTGTTTCTAATGTTCTTTCTTTTGATTGTTTAATAGCTAAACTAAGGCATTCCAAATATTAAGCATACACATGCATTTTGTCATTTCAAATTTAAGATTTTCTTTTCTGATCCCATGTTTACTGTATCTCAAAGAAGTAACTTTGTTTCATAGCTTAAGCTGTTTGTTGCTACTTGTTTGGAATTGTAGTTTGAAAAATTGGTCACTGGTGAATTGTTGAATCATTGCGGCAAATCCTTTTTATCCATCAATAAATTCCTAGAGCACATTATTGAATAAACTAATACTTTATGTGAACATTTGATTGTCTTTACTGCTTCTGTTGGAGTACTAAAGTTCATCTTTAAGTTTCCTGTTGTTGATAACTTTCAATTTGTTCCTTACAGGCCGAGTACTTCCGCCAGTTGCTAAAACCTGTCACGTAGGATAACATTGCAAAAAGTATTTGGACATTGGGGAGTTGGGTGGACTGGCCTCCAGTTGTGCTAGAGTGAAGAAATGAAATATTTCTTTCCTGTTTGTCTTTAATTTGATATAAAGATCTTGCTTAAATTTAAATGGCAACATATAGAGTTGCTGTGTAGTCTTCTCGTTATTTAACATCCCATTTTAATTTTCGTAATATAATAGCAAGCTCTCCTGGGAGAAGATACGATAACCTGAAGTTTGGAGAGTTTCCCGTTTGTTTGTTTCTTTTCAATGGACTTCATGCAGAGTGACCTCAACTTTTACCTCAAGAAGGCAACGCATCCCACAGCAACCCAGGGGGACGATAATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTGCCTCCTGGGAGAAAGAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTTGACCACACTGACAATCGAAGCCAAATCATGTTTCATCCTGCAATTGCCAACAAACTCAGTGGTCCTACTGCAAATATGTGCTCAAAGTATATCCAAAAGAACTTCTGCGTCAATGACAAGCATCACGAAGATAGAGAAATATCATCTCCTTTGATGGAGGATTTGGACGATATCGATGCATTATTGAGCTTGGAAAACGAAAATCACGAGGACATTGATGGATCTGAAGATGACGAGGTCAGCACTGCAAGATCTCATTTGAATTATGGGAATCAATCCCCCGATTCTTCATCCTCCTCCACTTACAGTTCAAAACCCAGGAAGAATCACTCATTTAATCCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCAACAGCGACATGAAACAGTTAAAACTCAAGAAAATGGTGAGAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACGACAGTTGCTGTTCTAGACGAAGCTGTTAAATACCTGAAGTCTCTGAAGGACGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAACTAA

mRNA sequence

ATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTTGAGGAAATTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGCCAGAGTGACCTCAACTTTTACCTCAAGAAGGCAACGCATCCCACAGCAACCCAGGGGGACGATAATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTGCCTCCTGGGAGAAAGAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTTGACCACACTGACAATCGAAGCCAAATCATGTTTCATCCTGCAATTGCCAACAAACTCAGTGGTCCTACTGCAAATATGTGCTCAAAGTATATCCAAAAGAACTTCTGCGTCAATGACAAGCATCACGAAGATAGAGAAATATCATCTCCTTTGATGGAGGATTTGGACGATATCGATGCATTATTGAGCTTGGAAAACGAAAATCACGAGGACATTGATGGATCTGAAGATGACGAGGTCAGCACTGCAAGATCTCATTTGAATTATGGGAATCAATCCCCCGATTCTTCATCCTCCTCCACTTACAGTTCAAAACCCAGGAAGAATCACTCATTTAATCCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCAACAGCGACATGAAACAGTTAAAACTCAAGAAAATGGTGAGAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACGACAGTTGCTGTTCTAGACGAAGCTGTTAAATACCTGAAGTCTCTGAAGGACGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAACTAA

Coding sequence (CDS)

ATGTACATTGGTATTACGGGAAAGAGAAACAGAGCTGTTGAGGAAATTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGCCAGAGTGACCTCAACTTTTACCTCAAGAAGGCAACGCATCCCACAGCAACCCAGGGGGACGATAATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTGCCTCCTGGGAGAAAGAACTTGGGACCTTTCAATACTGTTGAGTTTCAACCTTCTGAAGTTTGTCCCCAAAATTTCATCATCTTTGACCACACTGACAATCGAAGCCAAATCATGTTTCATCCTGCAATTGCCAACAAACTCAGTGGTCCTACTGCAAATATGTGCTCAAAGTATATCCAAAAGAACTTCTGCGTCAATGACAAGCATCACGAAGATAGAGAAATATCATCTCCTTTGATGGAGGATTTGGACGATATCGATGCATTATTGAGCTTGGAAAACGAAAATCACGAGGACATTGATGGATCTGAAGATGACGAGGTCAGCACTGCAAGATCTCATTTGAATTATGGGAATCAATCCCCCGATTCTTCATCCTCCTCCACTTACAGTTCAAAACCCAGGAAGAATCACTCATTTAATCCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCAACAGCGACATGAAACAGTTAAAACTCAAGAAAATGGTGAGAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACGACAGTTGCTGTTCTAGACGAAGCTGTTAAATACCTGAAGTCTCTGAAGGACGAAGTGCAGAAACTCGGAGTCGGGGGCTTGGAGAACTAA

Protein sequence

MYIGITGKRNRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLMEDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN*

Homology

[Close]

BLAST of Chy2G024300 vs. ExPASy Swiss-Prot
Match: Q9ASX9 (Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-34
Identity = 101/239 (42.26%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 54  GDDN-HMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHP 113
           GD N H      S++ ++ PP  K   P++ VE QPS VCP+NF+IFD T +RSQ+M+HP
Sbjct: 14  GDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHP 73

Query: 114 AIANKL-SGPTANMCSKYIQKNF---CVNDKHHEDREISSPLMEDLDDIDALLSLE---- 173
            + +KL + P+ N  +   Q  +      +  + ++E+SS   ED ++IDALLS +    
Sbjct: 74  ELTHKLMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYE 133

Query: 174 --NENHEDIDGSEDDEVSTAR-SHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSG 233
             ++N  + DG + +EVSTAR S  +YGN + +S  SS Y      N++      S S+ 
Sbjct: 134 ENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSS-YGYNNNNNNNSRKQSLSGSAS 193

Query: 234 SSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 281
           SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   N
Sbjct: 194 SSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of Chy2G024300 vs. ExPASy TrEMBL
Match: A0A5A7UBJ4 (Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008860 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.0e-151
Identity = 274/280 (97.86%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MYIGITGKRNRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60
           MYIGITGKR+RAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ
Sbjct: 1   MYIGITGKRSRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60

Query: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120
           IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG
Sbjct: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTANMCSKYIQKNFCVNDKHHEDREISSPLMEDLDDIDALLSLENENHEDIDGSEDDEVS 180
           PTANMCSKYIQKNFCVND H+EDREISSPLMEDLDDIDALLSLENENHE +DGSEDDEVS
Sbjct: 121 PTANMCSKYIQKNFCVNDNHYEDREISSPLMEDLDDIDALLSLENENHEGLDGSEDDEVS 180

Query: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSCNSDMKQLKLKKMVRKL 240
           TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSC+SDMKQLKLKKMVRKL
Sbjct: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSCSSDMKQLKLKKMVRKL 240

Query: 241 REILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 281
           REILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN
Sbjct: 241 REILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Chy2G024300 vs. ExPASy TrEMBL
Match: A0A0A0KLX4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.7e-133
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91
           M   QSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 151
           CPQNFIIFDHTDNRSQIMFHPA+ANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 120

Query: 152 EDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 211
           EDLDDIDALLSLENENHED+DGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF
Sbjct: 121 EDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 212 NPVHKSSSSGSSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 271
           NPVHKSSSSGSSCNSD+KQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 240

Query: 272 KLGVGGLEN 281
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 249

[Close]

BLAST of Chy2G024300 vs. ExPASy TrEMBL
Match: A0A1S3AYV1 (transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.6e-131
Identity = 240/249 (96.39%), Postives = 243/249 (97.59%), Query Frame = 0


Query: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91
           M   QSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVND H+EDREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 152 EDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 211
           EDLDDIDALLSLENENHE +DGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 212 NPVHKSSSSGSSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 271
           NPVHKSSSSGSSC+SDMKQLKLKKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

Query: 272 KLGVGGLEN 281
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 249

[Close]

BLAST of Chy2G024300 vs. ExPASy TrEMBL
Match: A0A6J1EDR8 (transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.3e-114
Identity = 222/251 (88.45%), Postives = 233/251 (92.83%), Query Frame = 0


Query: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91
           M   QSDLN YLK A  PTA QG DNHMQIPLSSA+PSVLPPGR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHED-REISSPL 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND+H++D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 152 MEDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 211
           MEDLDDIDALLSL++E+HEDIDGSED+E+STARSHLNYGNQSPDSSSSS YSSKPRKN S
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSS-YSSKPRKNRS 180

Query: 212 FNPVHKSSSSG-SSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDE 271
           FNPVHK SSSG SS +SDMKQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 272 VQKLGVGGLEN 281
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 250

[Close]

BLAST of Chy2G024300 vs. ExPASy TrEMBL
Match: A0A6J1INB7 (transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 3.0e-114
Identity = 221/251 (88.05%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91
           M   QSDLN YLK    PTA QG DNHMQIPLSSAFPSVLP GR NLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHED-REISSPL 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNF VND+H++D REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 152 MEDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHS 211
           MEDLDDIDALLSLE+E+HEDIDG ED+E+STARSHLNYGNQSPDSSSS  YSS+PRKN S
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPDSSSS--YSSEPRKNQS 180

Query: 212 FNPVHKSSSSG-SSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDE 271
           FNPVHK SSSG SSCNSDMKQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 272 VQKLGVGGLEN 281
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 249

[Close]

BLAST of Chy2G024300 vs. NCBI nr
Match: KAA0052558.1 (transcription factor bHLH144 [Cucumis melo var. makuwa] >TYK13268.1 transcription factor bHLH144 [Cucumis melo var. makuwa])

HSP 1 Score: 541 bits (1395), Expect = 7.10e-194
Identity = 274/280 (97.86%), Postives = 278/280 (99.29%), Query Frame = 0


Query: 1   MYIGITGKRNRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60
           MYIGITGKR+RAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ
Sbjct: 1   MYIGITGKRSRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60

Query: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120
           IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG
Sbjct: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTANMCSKYIQKNFCVNDKHHEDREISSPLMEDLDDIDALLSLENENHEDIDGSEDDEVS 180
           PTANMCSKYIQKNFCVND H+EDREISSPLMEDLDDIDALLSLENENHE +DGSEDDEVS
Sbjct: 121 PTANMCSKYIQKNFCVNDNHYEDREISSPLMEDLDDIDALLSLENENHEGLDGSEDDEVS 180

Query: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSCNSDMKQLKLKKMVRKL 240
           TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSC+SDMKQLKLKKMVRKL
Sbjct: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSCSSDMKQLKLKKMVRKL 240

Query: 241 REILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 280
           REILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN
Sbjct: 241 REILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Chy2G024300 vs. NCBI nr
Match: KAG7034698.1 (Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488 bits (1255), Expect = 1.54e-172
Identity = 254/281 (90.39%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MYIGITGKRNRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60
           MYIGITGKRNRAV+E+GKVNMSVGIIAYYQVMQVCQSDLN YLK A  PTA QG DNHMQ
Sbjct: 1   MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQ 60

Query: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120
           IPLSSA+ SVLPPGR NLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG
Sbjct: 61  IPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTANMCSKYIQKNFCVNDKHHEDREISSPLMEDLDDIDALLSLENENHEDIDGSEDDEVS 180
           PTANMCSKYIQKNF VND+H++DREISSPLMEDLDDIDALLSLE+E+HEDIDGSED+E+S
Sbjct: 121 PTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEIS 180

Query: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSG-SSCNSDMKQLKLKKMVRK 240
           TARSHLNYGNQSPDSSSSS YSSKPRKN SFNPVHK SSSG SS +SDMKQLK+KKMVRK
Sbjct: 181 TARSHLNYGNQSPDSSSSS-YSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRK 240

Query: 241 LREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 280
           LREILPGGYQMTTV VLDEAVKYLKSLKDEVQKLGVGGLEN
Sbjct: 241 LREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Chy2G024300 vs. NCBI nr
Match: XP_004134628.1 (transcription factor bHLH144 [Cucumis sativus] >XP_004134630.1 transcription factor bHLH144 [Cucumis sativus] >XP_031743511.1 transcription factor bHLH144 [Cucumis sativus] >KGN49377.1 hypothetical protein Csa_003727 [Cucumis sativus])

HSP 1 Score: 483 bits (1242), Expect = 4.76e-171
Identity = 243/249 (97.59%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91
           M   QSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 151
           CPQNFIIFDHTDNRSQIMFHPA+ANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 120

Query: 152 EDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 211
           EDLDDIDALLSLENENHED+DGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF
Sbjct: 121 EDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 212 NPVHKSSSSGSSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 271
           NPVHKSSSSGSSCNSD+KQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 240

Query: 272 KLGVGGLEN 280
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 249

[Close]

BLAST of Chy2G024300 vs. NCBI nr
Match: XP_008439654.1 (PREDICTED: transcription factor bHLH144 [Cucumis melo] >XP_008439656.1 PREDICTED: transcription factor bHLH144 [Cucumis melo])

HSP 1 Score: 474 bits (1221), Expect = 7.55e-168
Identity = 240/249 (96.39%), Postives = 243/249 (97.59%), Query Frame = 0


Query: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91
           M   QSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVND H+EDREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 152 EDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 211
           EDLDDIDALLSLENENHE +DGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 212 NPVHKSSSSGSSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 271
           NPVHKSSSSGSSC+SDMKQLKLKKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

Query: 272 KLGVGGLEN 280
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 249

[Close]

BLAST of Chy2G024300 vs. NCBI nr
Match: XP_038881999.1 (transcription factor bHLH144 [Benincasa hispida])

HSP 1 Score: 447 bits (1149), Expect = 7.32e-157
Identity = 227/249 (91.16%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91
           M   QSDLNFYLK+A HP A QGDDNHMQIPLSSAFPSVLPPGRKNLGPFN VEFQPSEV
Sbjct: 1   MDFMQSDLNFYLKQAMHPRANQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNNVEFQPSEV 60

Query: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 151
           CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFC+ND+H+EDREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCINDEHYEDREISSPLM 120

Query: 152 EDLDDIDALLSLENENHEDIDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 211
           EDLDDIDALLSL++E+HED+DGSED+E STARSHLNYGNQSPDSSSSS YSSKPRKN SF
Sbjct: 121 EDLDDIDALLSLDDEDHEDLDGSEDEERSTARSHLNYGNQSPDSSSSS-YSSKPRKNKSF 180

Query: 212 NPVHKSSSSGSSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQ 271
           NPVHKSSSSGSSC+SDMKQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

Query: 272 KLGVGGLEN 280
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 248

[Close]

BLAST of Chy2G024300 vs. TAIR 10
Match: AT1G29950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 9.3e-36
Identity = 101/239 (42.26%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 54  GDDN-HMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHP 113
           GD N H      S++ ++ PP  K   P++ VE QPS VCP+NF+IFD T +RSQ+M+HP
Sbjct: 14  GDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHP 73

Query: 114 AIANKL-SGPTANMCSKYIQKNF---CVNDKHHEDREISSPLMEDLDDIDALLSLE---- 173
            + +KL + P+ N  +   Q  +      +  + ++E+SS   ED ++IDALLS +    
Sbjct: 74  ELTHKLMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYE 133

Query: 174 --NENHEDIDGSEDDEVSTAR-SHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSG 233
             ++N  + DG + +EVSTAR S  +YGN + +S  SS Y      N++      S S+ 
Sbjct: 134 ENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSS-YGYNNNNNNNSRKQSLSGSAS 193

Query: 234 SSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 281
           SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   N
Sbjct: 194 SSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of Chy2G024300 vs. TAIR 10
Match: AT1G29950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 9.3e-36
Identity = 101/239 (42.26%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 54  GDDN-HMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHP 113
           GD N H      S++ ++ PP  K   P++ VE QPS VCP+NF+IFD T +RSQ+M+HP
Sbjct: 14  GDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHP 73

Query: 114 AIANKL-SGPTANMCSKYIQKNF---CVNDKHHEDREISSPLMEDLDDIDALLSLE---- 173
            + +KL + P+ N  +   Q  +      +  + ++E+SS   ED ++IDALLS +    
Sbjct: 74  ELTHKLMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYE 133

Query: 174 --NENHEDIDGSEDDEVSTAR-SHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSG 233
             ++N  + DG + +EVSTAR S  +YGN + +S  SS Y      N++      S S+ 
Sbjct: 134 ENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSS-YGYNNNNNNNSRKQSLSGSAS 193

Query: 234 SSCNSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 281
           SS N    + K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   N
Sbjct: 194 SSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of Chy2G024300 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.2e-04
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 232 KLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKL 274
           ++ + +R L+ ++PGG +M T ++LDEA+ Y+K LK +VQ L
Sbjct: 143 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 184

[Close]

BLAST of Chy2G024300 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.4e-04
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 232 KLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEVQKL 274
           ++ + +R L+ I+PGG +M T ++LDEA++Y K LK +V+ L
Sbjct: 133 RISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174

The following BLAST results are available for this feature:

BLAST of Chy2G024300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASX9	1.3e-34	42.26	Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=...	[more]

BLAST of Chy2G024300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBJ4	3.0e-151	97.86	Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KLX4	1.7e-133	97.59	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 S...	[more]
A0A1S3AYV1	4.6e-131	96.39	transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1	[more]
A0A6J1EDR8	1.3e-114	88.45	transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 ...	[more]
A0A6J1INB7	3.0e-114	88.05	transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE...	[more]

BLAST of Chy2G024300 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052558.1	7.10e-194	97.86	transcription factor bHLH144 [Cucumis melo var. makuwa] >TYK13268.1 transcriptio...	[more]
KAG7034698.1	1.54e-172	90.39	Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004134628.1	4.76e-171	97.59	transcription factor bHLH144 [Cucumis sativus] >XP_004134630.1 transcription fac...	[more]
XP_008439654.1	7.55e-168	96.39	PREDICTED: transcription factor bHLH144 [Cucumis melo] >XP_008439656.1 PREDICTED...	[more]
XP_038881999.1	7.32e-157	91.16	transcription factor bHLH144 [Benincasa hispida]	[more]

BLAST of Chy2G024300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29950.1	9.3e-36	42.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G29950.2	9.3e-36	42.26	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	3.2e-04	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	9.4e-04	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..227
None	No IPR available	PANTHER	PTHR36066:SF11	TRANSCRIPTION FACTOR BHLH144	coord: 36..278
IPR037546	Transcription factor SAC51-like	PANTHER	PTHR36066	TRANSCRIPTION FACTOR BHLH145	coord: 36..278
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 217..266 score: 8.822596
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 232..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G024300.1	Chy2G024300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity