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Chy2G023780 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGCTCTTCTAAAATTTGCAAGGATCCTCGTCATCGGTATGCACAATTTGGGTGATCTGTATGATATGGATCATGATTTGGAGATTATGTGCAATTGACCGTAGTTGTGGCCAATTGGTCGATATCAACATTGAGTACTTTAGCACTGATGACTTGCTTCAATAATTACTCGGAGGTATTGATTCACTCCACTGCATCACACTAGCCTTTTGCAGTATGGGTTTAAGATTATTTGATTATATATAGGCTATGAAGAAATCGGTCCTAAATTTTGTTTAGTTTCTGTGGTAGTTAAAACAATTGTCATGCCAGTTTGATGTTCTAGCCCTTGAATCTCAACTTTTAGTACAGATTTTTAAATATTTCATTAAAATTTCTACCTTGGCACTGACAATACGCCCAATGGAGCATTTGCAATACCCATTTATTTACCTTTATTCTCGTCATCCACTTTGACTGAGAAATCGCTAGCCAGAATGGAGACTGGAGTGCAACCCCTTGAGAATCACTAAAGATTAACAAGTTTTCTTATGAGTTTCGTATTTACTTGATTTTGATATTTCTTTTTATAAATATTCACTTGTTGCAGTTCAAATCATCTTAGAAGACTCAAGCTTCTCGCTGTTAGACCATATATACATCTCTATAGTTTCATTTGATGTGGAAACTTCGAAAACCGTTGGATGTTGTTGCCTTCTTCTGGAATCGTTCAAACTGTTTGAGAACCCTGTTGGAGACCGTCTTGCCAGTGGCCCAGTGATGGCTGATTTAGAATCTCTTGACTTGCACCAATGTTTCAGTTTGAACTTGGCCGGAGATTTGGGAAAAGAATGTGCTAAAAGAAGGGTCAAAGTTAACTAA ATGTTTGCTCTTCTAAAATTTGCAAGGATCCTCGTCATCGTTCAAATCATCTTAGAAGACTCAAGCTTCTCGCTGTTAGACCATATATACATCTCTATAGTTTCATTTGATGTGGAAACTTCGAAAACCGTTGGATGTTGTTGCCTTCTTCTGGAATCGTTCAAACTGTTTGAGAACCCTGTTGGAGACCGTCTTGCCAGTGGCCCAGTGATGGCTGATTTAGAATCTCTTGACTTGCACCAATGTTTCAGTTTGAACTTGGCCGGAGATTTGGGAAAAGAATGTGCTAAAAGAAGGGTCAAAGTTAACTAA ATGTTTGCTCTTCTAAAATTTGCAAGGATCCTCGTCATCGTTCAAATCATCTTAGAAGACTCAAGCTTCTCGCTGTTAGACCATATATACATCTCTATAGTTTCATTTGATGTGGAAACTTCGAAAACCGTTGGATGTTGTTGCCTTCTTCTGGAATCGTTCAAACTGTTTGAGAACCCTGTTGGAGACCGTCTTGCCAGTGGCCCAGTGATGGCTGATTTAGAATCTCTTGACTTGCACCAATGTTTCAGTTTGAACTTGGCCGGAGATTTGGGAAAAGAATGTGCTAAAAGAAGGGTCAAAGTTAACTAA MFALLKFARILVIVQIILEDSSFSLLDHIYISIVSFDVETSKTVGCCCLLLESFKLFENPVGDRLASGPVMADLESLDLHQCFSLNLAGDLGKECAKRRVKVN* Homology
BLAST of Chy2G023780 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.1e-06 Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 0
BLAST of Chy2G023780 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06 Identity = 41/111 (36.94%), Postives = 52/111 (46.85%), Query Frame = 0
BLAST of Chy2G023780 vs. ExPASy TrEMBL
Match: A0A6J1ILH5 (F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.2e-05 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0
BLAST of Chy2G023780 vs. ExPASy TrEMBL
Match: A0A6J1EGI8 (F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.2e-05 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0
BLAST of Chy2G023780 vs. ExPASy TrEMBL
Match: A0A6J1ECV6 (F-box protein SKIP19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.2e-05 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0
BLAST of Chy2G023780 vs. ExPASy TrEMBL
Match: A0A251JDM0 (F-box domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_14G135100 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 7.1e-05 Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 0
BLAST of Chy2G023780 vs. NCBI nr
Match: XP_038883506.1 (F-box protein SKIP19-like [Benincasa hispida]) HSP 1 Score: 69.7 bits (169), Expect = 2.30e-11 Identity = 47/111 (42.34%), Postives = 55/111 (49.55%), Query Frame = 0
BLAST of Chy2G023780 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia]) HSP 1 Score: 59.3 bits (142), Expect = 1.16e-07 Identity = 41/111 (36.94%), Postives = 52/111 (46.85%), Query Frame = 0
BLAST of Chy2G023780 vs. NCBI nr
Match: KAF3962849.1 (hypothetical protein CMV_012689 [Castanea mollissima]) HSP 1 Score: 55.5 bits (132), Expect = 2.85e-06 Identity = 40/107 (37.38%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of Chy2G023780 vs. NCBI nr
Match: XP_022978592.1 (F-box protein SKIP19-like [Cucurbita maxima]) HSP 1 Score: 55.1 bits (131), Expect = 3.79e-06 Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of Chy2G023780 vs. NCBI nr
Match: XP_022925898.1 (F-box protein SKIP19-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 55.1 bits (131), Expect = 3.79e-06 Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of Chy2G023780 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 5.8e-07 Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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