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Chy2G023710 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCCACCACTACCATGATGACCTTCGTCCCTCAGTTTAATGGCCTCAGGCCCACTACTTCAGTACCCGTTCGCAGTCTGGTAAGTCACCCTCACCGTCGCTGCCGTTGCTGTTGCTGTTGCTGTCGGCTTTGAATCACCGGAAAAAGGCTGAAATGTTATTTGATTTTGCAGGTTGCGGTTCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCGCCTACCAACTTGGTAAACTCTCAATTTCCACTACTCTTTGCTTTCTAATTTTTTTTCTTTTAAATTCTAAAGATTTATTTTATGATCCCTCATATTTTGATTTTTGATGTCATGAATATCGATTGTAGAAATAGAGGATGAAATATTGGGGTAAAATCTACGAAAAATATAAATAAAATCGAAAGTTAGGACTTCGATCAATAACATGTAGAAGTATATGTTATGAGATCATTTTTCAAGATTAATCATTAATATACGAAACTGAGATGTTTCACATAAGTTTTAAATTTGAGTATATAAACAACAGATCACGATATAACATTACCATTTTCTAAAGGGAGGAAAACAATGCAACATGATCATGTTAGAATTTGGATCTATGGAGAAAAAATGTATTACTTTTTAACTGTAATGGTAAAAGGGGATACATAGGCTCAATATATAATTATTTTGTTTGATTTCTCGTGTGCCCAATGAATTACAAACCATGTGTATATACATAAAATAACGTAAGAACTATTTGTGTAAACGTGGCAATAAAAAAAAACAGATAATGGTGATATCGACGAGCCTGATGCTGTTCGCTGGGCGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCGGGGTTGAAGCTGGAGGTGAGGGACTCTGGGCTACAGACGGGTGACCCAGCGGGTTTCACCCTCGCTGATACCTTGGCATGTGGCACTGTCGGCCACATCATTGGCGTCGGTGTTGTTCTTGGCCTTAAGGGCATTGGCTCTTTGTAA ATGGCAGCCACCACTACCATGATGACCTTCGTCCCTCAGTTTAATGGCCTCAGGCCCACTACTTCAGTACCCGTTCGCAGTCTGGTTGCGGTTCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCGCCTACCAACTTGATAATGGTGATATCGACGAGCCTGATGCTGTTCGCTGGGCGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCGGGGTTGAAGCTGGAGGTGAGGGACTCTGGGCTACAGACGGGTGACCCAGCGGGTTTCACCCTCGCTGATACCTTGGCATGTGGCACTGTCGGCCACATCATTGGCGTCGGTGTTGTTCTTGGCCTTAAGGGCATTGGCTCTTTGTAA ATGGCAGCCACCACTACCATGATGACCTTCGTCCCTCAGTTTAATGGCCTCAGGCCCACTACTTCAGTACCCGTTCGCAGTCTGGTTGCGGTTCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCGCCTACCAACTTGATAATGGTGATATCGACGAGCCTGATGCTGTTCGCTGGGCGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCGGGGTTGAAGCTGGAGGTGAGGGACTCTGGGCTACAGACGGGTGACCCAGCGGGTTTCACCCTCGCTGATACCTTGGCATGTGGCACTGTCGGCCACATCATTGGCGTCGGTGTTGTTCTTGGCCTTAAGGGCATTGGCTCTTTGTAA MAATTTMMTFVPQFNGLRPTTSVPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKGIGSL* Homology
BLAST of Chy2G023710 vs. ExPASy Swiss-Prot
Match: Q9SUI5 (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAK PE=2 SV=2) HSP 1 Score: 194.9 bits (494), Expect = 5.8e-49 Identity = 100/129 (77.52%), Postives = 115/129 (89.15%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy Swiss-Prot
Match: Q9ZT05 (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=3879 GN=PSAK PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 8.6e-45 Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy Swiss-Prot
Match: P36886 (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAK PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.1e-39 Identity = 93/131 (70.99%), Postives = 105/131 (80.15%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy Swiss-Prot
Match: P14225 (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAK PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 6.6e-21 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy Swiss-Prot
Match: P42051 (Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 GN=PSAK PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.9e-10 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy TrEMBL
Match: A0A0A0KM49 (PSI-K OS=Cucumis sativus OX=3659 GN=Csa_6G525340 PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy TrEMBL
Match: A0A5A7U9C9 (PSI-K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009450 PE=3 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.9e-59 Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy TrEMBL
Match: A0A1S3AZR1 (PSI-K OS=Cucumis melo OX=3656 GN=LOC103484327 PE=3 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.9e-59 Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy TrEMBL
Match: A0A6J1CZY3 (PSI-K OS=Momordica charantia OX=3673 GN=LOC111015785 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57 Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of Chy2G023710 vs. ExPASy TrEMBL
Match: A0A6J1IQ95 (PSI-K OS=Cucurbita maxima OX=3661 GN=LOC111477837 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56 Identity = 119/128 (92.97%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Chy2G023710 vs. NCBI nr
Match: XP_004134641.1 (photosystem I reaction center subunit psaK, chloroplastic [Cucumis sativus] >KGN49447.1 hypothetical protein Csa_002715 [Cucumis sativus]) HSP 1 Score: 254 bits (650), Expect = 3.22e-85 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Chy2G023710 vs. NCBI nr
Match: XP_008439573.1 (PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis melo] >KAA0052503.1 photosystem I reaction center subunit psaK [Cucumis melo var. makuwa] >TYK13321.1 photosystem I reaction center subunit psaK [Cucumis melo var. makuwa]) HSP 1 Score: 237 bits (604), Expect = 3.23e-78 Identity = 126/132 (95.45%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of Chy2G023710 vs. NCBI nr
Match: XP_038883621.1 (photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida]) HSP 1 Score: 231 bits (590), Expect = 4.40e-76 Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of Chy2G023710 vs. NCBI nr
Match: XP_022146631.1 (photosystem I reaction center subunit psaK, chloroplastic [Momordica charantia]) HSP 1 Score: 231 bits (589), Expect = 6.26e-76 Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of Chy2G023710 vs. NCBI nr
Match: XP_023543618.1 (photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 230 bits (587), Expect = 1.26e-75 Identity = 120/128 (93.75%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Chy2G023710 vs. TAIR 10
Match: AT1G30380.1 (photosystem I subunit K ) HSP 1 Score: 194.9 bits (494), Expect = 4.1e-50 Identity = 100/129 (77.52%), Postives = 115/129 (89.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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