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Chy2G023600 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCTTCTGTCCACGATTATTCTGGTAACTTGATCAATCTCATGTTCCTATGTTATGCTGTTTAGTTTTATATTCTATTTGTAGTTGCATATTGCTTCTCGATCTTTTGGAAAGAGAATCAATATGTTTTGCTTTCTTTCTTCCTGAATTTTCTACACAGAAATAATGATTTCATCAGTTCATTTGGCTGATACTTCATGAGATTAGTTATTCATTTTGAATTATGTACTATGTGCTATCTCTTTTAATGGCAAATAGAACTTTCATTGAAAGATCAATAATGCAAAAGAATGGGGGGAGATAGGTAATCTGCCTACTGGCAACTATTGAAGAGAATAGAGTACTTACAAACAGCTTTTGAGGGTACTTCAAAAGAAGGCAACAAAAAGAATTAAGACCCGAAGTTCCATCTTGTTAAATTATTAAGTACTTTTTTTAAAGAAAAAAAACAGCATTTAAATTGTAGCAAAAAGAACATGATCCCCAAAATGCTAGCCCTCTTGAAGAAAAGGATGATTTGCATACATGTAGACAAAGAACTCTTTAAATTTCTTGGGATGACAATATAATGGTAAAGCTATTGAAAAGACTCCACTAAACTTGAATCAAGATTCATGTGCTTGGCATCTTCATTTGAACCCTTGCACATACTGCTTCACTCATTGGATGGTGAAGAATCAAATTCCTTTTGTTGAATGCTATCATTAGTGTCTTTTCAAAGTCTTTCACAATTTGAAGGATCAATCAGTTAGATCACCAAAATAAAAATAAATAAATAAAGACGTCAAGAAAAGTCACTCGATTGATCTATTTTCCACTCTTTAGTGTCACTGGCTGAAGCTAGTCAAACACCTTATATGAAATGCATTGAGGTTCTCTCTAACATTTAAGTTTCTCTTCAAGTTCAACAGCTAGAAATATTCCTTTTCTGTCAGCTAGTGCATAAATTCTTGCAAAAGGATCGAGAGACCTTCCCCAACACTTAGCATAGTTCTGTTGGTGTTGGTAGTTGCATTTTGTTTTTGAAACCCATGGACTTTCTTGGCTTTCTGTATTGCGTCAAGGAGAAGTAGAAGTAGATCGCCCAAAAGAAGACTTGCTATATTTGCTTGCATTAATGCTTTGTCTATTTCTTTTGGGACATACCATGGGCGATATTTGAGCTCCATTTTTTTTGTGATCAGATTGTTTTTTAACCCTCCATTTTTTAATGCTCCCCCCCCCCCAACACACACACCAAATGTACCTGATATTATTGCTTGCTTTTGATGGCCACTTCTGTGGCTCAATGGAGTCTATCGATTACTTTGTGATATTGCAATATTGTCTTTTTCCTCCAACTGGGATTGAATAAATTTTGCCTCTGATTGTCCAGATAATGGTGAGGCTGATGAGCAGCGAAAGTACTCTGAATCTCAGAATCATTCTTCATCGGTCATAAATGGACTAAATCAATCAACCCCAAATCAGTATGTAGCGTCTCCCCAAGTTGGAGCAGGACATTCTATGGTACTATATTTAAAAAACTACTCTTCTTTTCTTAAACTCTTTGTGAAACTTGGTTTTCAAATTCTCTGTTCAAGATTTATGGTTATTTATTTATATTTTCTGAAAAAGATGCAAACTTTGTGTAGATTCAATAAATCAATAGTTTCAAGTAGAAAGAATAAAAGGAAGAAACAGAAAACTTTTCAACCTACCTTTATCGACAGGGAATTTATTATATTAATAGAATATCATTTATTTTTTAGTGAAACTGTCTGCTCATTTGGTATCATGAACGATAGTCATGCAGACAATATCAATAACTATCACCATTATTAGTTATATAAGGATGGCTAGTTAATAGAAACTGTGTTTTGCTTTTAGTCCACCTGATTAACTCATAATACAACCTTAAGTTTTAGTCACTTTCCTCTGAACACAGTTACCTTTCAGCTCCCATAATACGAATTTGATATGTTTTAGTTACAAATTACAATGGCCTTTCCTCTTGATCTTGGTCCATAGGACAGGACTGGCGAGATTGAGACATTACCACGATGATGGTTATGATAATGCTTCACCAAGTCATTGTTTTCTTTTTGCTAGACAAAGAATCTAGTTGCACTAATTTGTTGGCAGTGACTTTTTTAGAGCTTATTTGACTAATTTGGACCTTTGGGACTTCTATGATGAAGGTACCCCCGGCTTATCCATATCCAGATCCTTATTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTAAGTAGTTTGTTTCTTTTCAATATTGTCAATAACTTTTGTCAACATTGTCCATCGAGACACCAACTATGGTGTATTGACCAAGTCTAGAGATAATTTTCTAGTGTCCAAGAGGTGGACATTAATTTATCCTTTATGTTGTTGGCTTCGTACTGGGAAACCTTCTGCTTTGAGGAGAAAAACTGAAGGAAATTCACAATTATAACTTTAAGTTTACTGTAGACAGATAAAGAAAATGACCCCCCTCCCCTCCCTCCATACACACACACACAATCAAATGATAGAAGCAACATGCAGGACGGAATGGTATAATTACTTCGCTTGAGCTTGGAGGAATGGTTAACTCAGTATAAATACAACTATTCAAGGATCATGGATTTCTTAAGCCAAAAAATGAACGGCATCACCATGAAAGGAAGCATAGTTTATCAGATTGTCTTCTCAAATATGAATTATGACCGACTGATTTTGATATAAATGTTTGTTCTACCTTTTCTAGTCGTTTGATTACTAGTTTATTGCTCATTTTAGGTTCATCTTCAATTAATGGGGATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTCAATGCTAAACAGTATCATGGCATTTTACGACGCAGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGGTCTGCAAGCACAAACATTGCCTAATTGTTAAATGCTGGGTGTGCATAATTGTGATAGGCCTCCAATTGTGTATACTTGCTGGTTTTGATACAATATTTCTTTTTATTTCACGCTGCTTCATTCTTTAGTTTTTAACTTCCCATTGTATTTACTTGCTGGTTTTGATTCAATGCTTCCTTTTCTTTCACGATGCTTCATTCTTTAGTTTTTAACCGCTTATCTTCAATGTGTTGTGCAGCCATACTTGCATGAATCTCGACATCTACACGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAAAATCGTCAAAATGAGGTGGCATCGGGTGATAAATCACAGCCAAATATAAATCTGAATTCTGACAGAAGTGATCTTGCTTCTTCAGAGAACTGA ATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATGAGCAGCGAAAGTACTCTGAATCTCAGAATCATTCTTCATCGGTCATAAATGGACTAAATCAATCAACCCCAAATCAGTATGTAGCGTCTCCCCAAGTTGGAGCAGGACATTCTATGGTACCCCCGGCTTATCCATATCCAGATCCTTATTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTTCATCTTCAATTAATGGGGATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTCAATGCTAAACAGTATCATGGCATTTTACGACGCAGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATCTACACGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAAAATCGTCAAAATGAGGTGGCATCGGGTGATAAATCACAGCCAAATATAAATCTGAATTCTGACAGAAGTGATCTTGCTTCTTCAGAGAACTGA ATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATGAGCAGCGAAAGTACTCTGAATCTCAGAATCATTCTTCATCGGTCATAAATGGACTAAATCAATCAACCCCAAATCAGTATGTAGCGTCTCCCCAAGTTGGAGCAGGACATTCTATGGTACCCCCGGCTTATCCATATCCAGATCCTTATTACAGAAGCATCTTCACTCCCTATGATGCTCAACCATATCCTCCACAGCCCTATGGTGGGCAACCTATGGTTCATCTTCAATTAATGGGGATTCAGCAAGCTGGGGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTCAATGCTAAACAGTATCATGGCATTTTACGACGCAGACAGTCCCGTGCAAAAGCTGAATCAGAAAATAAAGCTCTAAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATCTACACGCATTGAGGAGAGCTAGAGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAAAATCGTCAAAATGAGGTGGCATCGGGTGATAAATCACAGCCAAATATAAATCTGAATTCTGACAGAAGTGATCTTGCTTCTTCAGAGAACTGA MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQSTPNQYVASPQVGAGHSMVPPAYPYPDPYYRSIFTPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENRQNEVASGDKSQPNINLNSDRSDLASSEN* Homology
BLAST of Chy2G023600 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47 Identity = 113/208 (54.33%), Postives = 140/208 (67.31%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42 Identity = 105/204 (51.47%), Postives = 137/204 (67.16%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.8e-26 Identity = 77/177 (43.50%), Postives = 98/177 (55.37%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.3e-23 Identity = 84/209 (40.19%), Postives = 109/209 (52.15%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy Swiss-Prot
Match: Q9LVJ7 (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21 Identity = 58/113 (51.33%), Postives = 77/113 (68.14%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy TrEMBL
Match: A0A0A0KIV0 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G525440 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 6.3e-106 Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy TrEMBL
Match: A0A5D3CPM7 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009570 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy TrEMBL
Match: A0A1S4DTP4 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103484315 PE=3 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104 Identity = 199/202 (98.51%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy TrEMBL
Match: A0A6J1ED47 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111433240 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99 Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of Chy2G023600 vs. ExPASy TrEMBL
Match: A0A6J1CZ21 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111015782 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.7e-99 Identity = 191/205 (93.17%), Postives = 195/205 (95.12%), Query Frame = 0
BLAST of Chy2G023600 vs. NCBI nr
Match: XP_004134622.1 (nuclear transcription factor Y subunit A-7 [Cucumis sativus] >XP_011658320.1 nuclear transcription factor Y subunit A-7 [Cucumis sativus] >XP_031743442.1 nuclear transcription factor Y subunit A-7 [Cucumis sativus] >XP_031743443.1 nuclear transcription factor Y subunit A-7 [Cucumis sativus] >KGN49458.1 hypothetical protein Csa_002841 [Cucumis sativus]) HSP 1 Score: 390 bits (1002), Expect = 1.45e-136 Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Chy2G023600 vs. NCBI nr
Match: KAA0052492.1 (nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa] >TYK13332.1 nuclear transcription factor Y subunit A-7 [Cucumis melo var. makuwa]) HSP 1 Score: 388 bits (997), Expect = 8.37e-136 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of Chy2G023600 vs. NCBI nr
Match: XP_016899328.1 (PREDICTED: LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-7 [Cucumis melo]) HSP 1 Score: 385 bits (990), Expect = 9.77e-135 Identity = 199/202 (98.51%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Chy2G023600 vs. NCBI nr
Match: XP_022925987.1 (nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_023544362.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo] >XP_023544363.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 369 bits (946), Expect = 5.54e-128 Identity = 190/205 (92.68%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of Chy2G023600 vs. NCBI nr
Match: XP_022146628.1 (nuclear transcription factor Y subunit A-7 [Momordica charantia]) HSP 1 Score: 367 bits (942), Expect = 2.26e-127 Identity = 191/205 (93.17%), Postives = 195/205 (95.12%), Query Frame = 0
BLAST of Chy2G023600 vs. TAIR 10
Match: AT1G30500.2 (nuclear factor Y, subunit A7 ) HSP 1 Score: 191.0 bits (484), Expect = 9.1e-49 Identity = 113/208 (54.33%), Postives = 140/208 (67.31%), Query Frame = 0
BLAST of Chy2G023600 vs. TAIR 10
Match: AT1G30500.1 (nuclear factor Y, subunit A7 ) HSP 1 Score: 181.0 bits (458), Expect = 9.4e-46 Identity = 109/208 (52.40%), Postives = 136/208 (65.38%), Query Frame = 0
BLAST of Chy2G023600 vs. TAIR 10
Match: AT2G34720.1 (nuclear factor Y, subunit A4 ) HSP 1 Score: 172.9 bits (437), Expect = 2.6e-43 Identity = 105/204 (51.47%), Postives = 137/204 (67.16%), Query Frame = 0
BLAST of Chy2G023600 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 ) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27 Identity = 77/177 (43.50%), Postives = 98/177 (55.37%), Query Frame = 0
BLAST of Chy2G023600 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 ) HSP 1 Score: 108.6 bits (270), Expect = 5.9e-24 Identity = 84/209 (40.19%), Postives = 109/209 (52.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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