Chy2G023550 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCCGATCAAATCCTCGGCCGCCATCGTCGCCTTCTTCTCACTGATCGCATCGATCGCGGCAGTGTCGGAGATACGCCCGTCAGAGCATGGGTTGGAGTTTCAGAGCCCTCCACCGGCTGGAGACAAATCGTCACCGGAGATGCGATCGTTTTTCGGAGGAATAACGTCGCCGACACCGGAAGTGGCATTGCCGATACCCAAGACGTTGAATTCGAGTGAATCGCCGGGATGGTGGAACCACCGTGACGGAGGAAACAAACGACTGAGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTAGTGGGTTCTACGTTATTCTACATTTTTAAGGTCAAAAATAAAAGATCGATGCCGTTATCACCAAACAATAATCACAAATAAAAGTATGATCATCATAATCATAATTGATGATAACTTTACACCAAGAATTTAGCTGTCATGAAATAGCCATATTTTTCTTAGTTTCAATTTTTTCTTACCGTTTGAGAATTCACATTTGATTTGATTATCTAATTAGACACAATTTTATTGCCATTAATTGTTTGTTTGGGAATCTATAAATCTCATGTATCAATTAATTTGTTTATATATTAATAAAAAGAAAAAAGAAAAAAACAGGGAGAAGTTTGTTTGGAGTTTGGAGTTTGCCTCTTCTATAAGTAAATAATATTCTCTTCTTGATTTTTCATGTAAGTATGATAAGCTGTGGAGACTGGAGATTTTGAATAAGAAATCTGATCAGATTTGAAATTAAAATAATTAGAGTCACCATACCCAATTATTAATGGAATTGTCATGAGGTATTATTATATTTGGTTGTTTGTTGGTTTCTTTTTCTTTTTCAAAAGATATGAATGATGAAGCTTTTGGTGTTAACTTTTGA ATGATTCCGATCAAATCCTCGGCCGCCATCGTCGCCTTCTTCTCACTGATCGCATCGATCGCGGCAGTGTCGGAGATACGCCCGTCAGAGCATGGGTTGGAGTTTCAGAGCCCTCCACCGGCTGGAGACAAATCGTCACCGGAGATGCGATCGTTTTTCGGAGGAATAACGTCGCCGACACCGGAAGTGGCATTGCCGATACCCAAGACGTTGAATTCGAGTGAATCGCCGGGATGGTGGAACCACCGTGACGGAGGAAACAAACGACTGAGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGATATGAATGATGAAGCTTTTGGTGTTAACTTTTGA ATGATTCCGATCAAATCCTCGGCCGCCATCGTCGCCTTCTTCTCACTGATCGCATCGATCGCGGCAGTGTCGGAGATACGCCCGTCAGAGCATGGGTTGGAGTTTCAGAGCCCTCCACCGGCTGGAGACAAATCGTCACCGGAGATGCGATCGTTTTTCGGAGGAATAACGTCGCCGACACCGGAAGTGGCATTGCCGATACCCAAGACGTTGAATTCGAGTGAATCGCCGGGATGGTGGAACCACCGTGACGGAGGAAACAAACGACTGAGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGATATGAATGATGAAGCTTTTGGTGTTAACTTTTGA MIPIKSSAAIVAFFSLIASIAAVSEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGITSPTPEVALPIPKTLNSSESPGWWNHRDGGNKRLRNALLVATAACGITDMNDEAFGVNF* Homology
BLAST of Chy2G023550 vs. ExPASy TrEMBL
Match: A0A5D3CP09 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009600 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.1e-49 Identity = 100/104 (96.15%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Chy2G023550 vs. ExPASy TrEMBL
Match: A0A0A0KM65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525480 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 5.3e-49 Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of Chy2G023550 vs. ExPASy TrEMBL
Match: A0A6J1KMY3 (uncharacterized protein LOC111497130 OS=Cucurbita maxima OX=3661 GN=LOC111497130 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38 Identity = 80/104 (76.92%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of Chy2G023550 vs. ExPASy TrEMBL
Match: A0A6J1EFQ9 (uncharacterized protein LOC111433768 OS=Cucurbita moschata OX=3662 GN=LOC111433768 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.1e-38 Identity = 81/104 (77.88%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of Chy2G023550 vs. ExPASy TrEMBL
Match: A0A6J1EFW4 (uncharacterized protein LOC111433017 OS=Cucurbita moschata OX=3662 GN=LOC111433017 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37 Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of Chy2G023550 vs. NCBI nr
Match: KAA0052489.1 (hypothetical protein E6C27_scaffold120G00880 [Cucumis melo var. makuwa] >TYK13335.1 hypothetical protein E5676_scaffold255G009600 [Cucumis melo var. makuwa]) HSP 1 Score: 204 bits (518), Expect = 9.72e-66 Identity = 100/104 (96.15%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Chy2G023550 vs. NCBI nr
Match: KAE8647762.1 (hypothetical protein Csa_003695 [Cucumis sativus]) HSP 1 Score: 203 bits (516), Expect = 2.98e-65 Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of Chy2G023550 vs. NCBI nr
Match: XP_038881937.1 (uncharacterized protein LOC120073270 isoform X1 [Benincasa hispida]) HSP 1 Score: 187 bits (476), Expect = 6.06e-59 Identity = 94/115 (81.74%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Chy2G023550 vs. NCBI nr
Match: XP_038881938.1 (uncharacterized protein LOC120073270 isoform X2 [Benincasa hispida]) HSP 1 Score: 185 bits (469), Expect = 3.18e-58 Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of Chy2G023550 vs. NCBI nr
Match: XP_023518243.1 (uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 170 bits (430), Expect = 6.79e-52 Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Chy2G023550 vs. TAIR 10
Match: AT4G21740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 5.8e-08 Identity = 35/104 (33.65%), Postives = 54/104 (51.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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