![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Chy2G023460 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCCGAAAGACTATTATAAAGCCAAGGAAGGGGATGATATATTTTTATGTGAGTATGAATATGACGTTCGTTGGCATAGTTTCAAGAGGTTGGCTGAAATTGATAAAGAACAGGATAGTGAAGCAGTTGATAGTGACACAGAGTGGAAGTTGGACCAGAGTGCAGACTCTGATTCAGACGGTGATGTGGAATATGAAGAAGAGAGAGCACAAATTTTACTATCTCGAAACTGCTCAAGCTCAACCCATGAATTAGCTGCAAATTCAAAGAAAGGACAATTTTGGGGACTACAAAAGATAGGAGCTAAGAAGATCCCAGAGCATACAAGAAGTCGCAAACAGACTGAATTGGAATGA ATGAATCCGAAAGACTATTATAAAGCCAAGGAAGGGGATGATATATTTTTATGTGAGTATGAATATGACGTTCGTTGGCATAGTTTCAAGAGGTTGGCTGAAATTGATAAAGAACAGGATAGTGAAGCAGTTGATAGTGACACAGAGTGGAAGTTGGACCAGAGTGCAGACTCTGATTCAGACGGTGATGTGGAATATGAAGAAGAGAGAGCACAAATTTTACTATCTCGAAACTGCTCAAGCTCAACCCATGAATTAGCTGCAAATTCAAAGAAAGGACAATTTTGGGGACTACAAAAGATAGGAGCTAAGAAGATCCCAGAGCATACAAGAAGTCGCAAACAGACTGAATTGGAATGA ATGAATCCGAAAGACTATTATAAAGCCAAGGAAGGGGATGATATATTTTTATGTGAGTATGAATATGACGTTCGTTGGCATAGTTTCAAGAGGTTGGCTGAAATTGATAAAGAACAGGATAGTGAAGCAGTTGATAGTGACACAGAGTGGAAGTTGGACCAGAGTGCAGACTCTGATTCAGACGGTGATGTGGAATATGAAGAAGAGAGAGCACAAATTTTACTATCTCGAAACTGCTCAAGCTCAACCCATGAATTAGCTGCAAATTCAAAGAAAGGACAATTTTGGGGACTACAAAAGATAGGAGCTAAGAAGATCCCAGAGCATACAAGAAGTCGCAAACAGACTGAATTGGAATGA MNPKDYYKAKEGDDIFLCEYEYDVRWHSFKRLAEIDKEQDSEAVDSDTEWKLDQSADSDSDGDVEYEEERAQILLSRNCSSSTHELAANSKKGQFWGLQKIGAKKIPEHTRSRKQTELE* Homology
BLAST of Chy2G023460 vs. ExPASy Swiss-Prot
Match: Q5SMU7 (Origin of replication complex subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ORC1 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.6e-24 Identity = 57/120 (47.50%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Chy2G023460 vs. ExPASy Swiss-Prot
Match: Q9SU24 (Origin of replication complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ORC1B PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.3e-20 Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of Chy2G023460 vs. ExPASy Swiss-Prot
Match: Q710E8 (Origin of replication complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ORC1A PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.5e-19 Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = 0
BLAST of Chy2G023460 vs. ExPASy TrEMBL
Match: A0A5D3CPN7 (Origin recognition complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009670 PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.3e-55 Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Chy2G023460 vs. ExPASy TrEMBL
Match: A0A1S4DTQ8 (Origin recognition complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103484307 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.6e-55 Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Chy2G023460 vs. ExPASy TrEMBL
Match: A0A0A0KM76 (Origin recognition complex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_6G525570 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53 Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of Chy2G023460 vs. ExPASy TrEMBL
Match: A0A0A0LED3 (Origin recognition complex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_3G644850 PE=3 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53 Identity = 108/119 (90.76%), Postives = 112/119 (94.12%), Query Frame = 0
BLAST of Chy2G023460 vs. ExPASy TrEMBL
Match: A0A6J1IG29 (Origin recognition complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111472568 PE=3 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49 Identity = 102/119 (85.71%), Postives = 108/119 (90.76%), Query Frame = 0
BLAST of Chy2G023460 vs. NCBI nr
Match: XP_031742568.1 (origin of replication complex subunit 1-like [Cucumis sativus]) HSP 1 Score: 218 bits (556), Expect = 1.63e-68 Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of Chy2G023460 vs. NCBI nr
Match: KAA0052480.1 (origin of replication complex subunit 1B-like [Cucumis melo var. makuwa] >TYK13342.1 origin of replication complex subunit 1B-like [Cucumis melo var. makuwa]) HSP 1 Score: 225 bits (574), Expect = 7.50e-67 Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Chy2G023460 vs. NCBI nr
Match: XP_016899376.1 (PREDICTED: origin of replication complex subunit 1B-like [Cucumis melo]) HSP 1 Score: 224 bits (570), Expect = 2.83e-66 Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Chy2G023460 vs. NCBI nr
Match: KAE8647765.1 (hypothetical protein Csa_002969 [Cucumis sativus]) HSP 1 Score: 218 bits (556), Expect = 6.78e-66 Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of Chy2G023460 vs. NCBI nr
Match: XP_031738488.1 (origin of replication complex subunit 1B [Cucumis sativus] >XP_031738489.1 origin of replication complex subunit 1B [Cucumis sativus] >XP_031738490.1 origin of replication complex subunit 1B [Cucumis sativus] >KAE8650880.1 hypothetical protein Csa_001639 [Cucumis sativus]) HSP 1 Score: 220 bits (561), Expect = 6.91e-65 Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of Chy2G023460 vs. TAIR 10
Match: AT4G12620.1 (origin of replication complex 1B ) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21 Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of Chy2G023460 vs. TAIR 10
Match: AT4G14700.1 (origin recognition complex 1 ) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20 Identity = 57/119 (47.90%), Postives = 79/119 (66.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|