Chy2G023400 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G023400
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Germin-like protein
Location	chrH02: 516179 .. 516727 (+)
RNA-Seq Expression	Chy2G023400
Synteny	Chy2G023400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCAGTGAAGGTGAATGGGTTCGTTTGCAAGAACCCAACTGACGTTACTGCTGAAGATTTCTTCAGGAGTGGGCTTCACACTCCCCGTGGCACAAACAACCCTGTAGGCTCCACCGTAACAGCCGTGAACGTGGGCAACCTCCCAGGACTCAACACTCTCGGCATCTCCCTGGTCCGCATCGACTACGGGCGGAATGGCATCAACCCACCCCACACTCACCCACGCGCCACCGAGATCCTCGTCGTTATTGAAGGCACCCTACTTGTAGGGTTCGTGTCATCAAACCAAGATGGCAACCGTCTCTTCTCCAAGGTCTTAAACAAAGGAGACGTGTTTGTTTTTCCAGAGGGGTTGGTCCACTTCCAACAAAACGTGGGGCGTCATAATGCGGTTGCGATTGCGGGGCTTAGCAGCCAAAACCCAGGCGTGGTCACAATTGCTAATACTGTATTTGGGTCCAAACCAGATATTCCCACTGATATCATAGCCAAGGCTTTCCAGACTGAAGCTGCCATTATTGCTGCCATTCAAGCCAAATTCTAA

mRNA sequence

ATGGGAGCAGTGAAGGTGAATGGGTTCGTTTGCAAGAACCCAACTGACGTTACTGCTGAAGATTTCTTCAGGAGTGGGCTTCACACTCCCCGTGGCACAAACAACCCTGTAGGCTCCACCGTAACAGCCGTGAACGTGGGCAACCTCCCAGGACTCAACACTCTCGGCATCTCCCTGGTCCGCATCGACTACGGGCGGAATGGCATCAACCCACCCCACACTCACCCACGCGCCACCGAGATCCTCGTCGTTATTGAAGGCACCCTACTTGTAGGGTTCGTGTCATCAAACCAAGATGGCAACCGTCTCTTCTCCAAGGTCTTAAACAAAGGAGACGTGTTTGTTTTTCCAGAGGGGTTGGTCCACTTCCAACAAAACGTGGGGCGTCATAATGCGGTTGCGATTGCGGGGCTTAGCAGCCAAAACCCAGGCGTGGTCACAATTGCTAATACTGTATTTGGGTCCAAACCAGATATTCCCACTGATATCATAGCCAAGGCTTTCCAGACTGAAGCTGCCATTATTGCTGCCATTCAAGCCAAATTCTAA

Coding sequence (CDS)

ATGGGAGCAGTGAAGGTGAATGGGTTCGTTTGCAAGAACCCAACTGACGTTACTGCTGAAGATTTCTTCAGGAGTGGGCTTCACACTCCCCGTGGCACAAACAACCCTGTAGGCTCCACCGTAACAGCCGTGAACGTGGGCAACCTCCCAGGACTCAACACTCTCGGCATCTCCCTGGTCCGCATCGACTACGGGCGGAATGGCATCAACCCACCCCACACTCACCCACGCGCCACCGAGATCCTCGTCGTTATTGAAGGCACCCTACTTGTAGGGTTCGTGTCATCAAACCAAGATGGCAACCGTCTCTTCTCCAAGGTCTTAAACAAAGGAGACGTGTTTGTTTTTCCAGAGGGGTTGGTCCACTTCCAACAAAACGTGGGGCGTCATAATGCGGTTGCGATTGCGGGGCTTAGCAGCCAAAACCCAGGCGTGGTCACAATTGCTAATACTGTATTTGGGTCCAAACCAGATATTCCCACTGATATCATAGCCAAGGCTTTCCAGACTGAAGCTGCCATTATTGCTGCCATTCAAGCCAAATTCTAA

Protein sequence

MGAVKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRIDYGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHFQQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF*

Homology

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BLAST of Chy2G023400 vs. ExPASy Swiss-Prot
Match: Q9LEA7 (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana OX=3702 GN=GLP9 PE=2 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 4.7e-65
Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  V A+DFF S L+ P  TNN VGS VT VNV NL GLNTLGISLVRID
Sbjct: 44  VFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRID 103

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  NG NPPHTHPRATEILVV +GTLLVGF+SSNQDGNRLF+K LN GDVFVFPEGL+HF
Sbjct: 104 YAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHF 163

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q N+G   AVAIA LSSQN GV+TIANT+FGSKPD+  +++A+AFQ +   +  +QA+F
Sbjct: 164 QFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222

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BLAST of Chy2G023400 vs. ExPASy Swiss-Prot
Match: Q9FMA8 (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana OX=3702 GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-64
Identity = 128/179 (71.51%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  VTA+DFF SGL T R   +PVGSTVTAVNV NL GLNTLGISLVRID
Sbjct: 44  VFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRID 103

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  NG NPPHTHPRATEILVV +GTLLVGFV+SN D NRLFSKVLN+GDVFVFPEGL+HF
Sbjct: 104 YAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNPD-NRLFSKVLNEGDVFVFPEGLIHF 163

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q N+G+  AVA A LSSQNPGV+TIANTVFG+ P I   I+AKAFQ    ++  +Q KF
Sbjct: 164 QANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

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BLAST of Chy2G023400 vs. ExPASy Swiss-Prot
Match: Q6K5P8 (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.0e-64
Identity = 122/179 (68.16%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V+VNG  CK+  DV AEDFF SGLH    T N  GS VTAVNV  +PGLNTLGISL RID
Sbjct: 46  VRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARID 105

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  +G+NPPHTHPRATEIL V+EG+L VGFV+SN + N+LF+KV+NKGDVFVFP+GLVHF
Sbjct: 106 YALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPE-NKLFTKVINKGDVFVFPKGLVHF 165

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q N G  +AVAI  LSSQNPGV+T+AN VFGSKP I  DI+AKAFQ E  ++  IQAKF
Sbjct: 166 QFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQVEKTVVDQIQAKF 223

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BLAST of Chy2G023400 vs. ExPASy Swiss-Prot
Match: P92996 (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana OX=3702 GN=GLP5A PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.1e-64
Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  V A+DFF SGL+ P  TNN VGS VT VNV  +PGLNT+GISLVRID
Sbjct: 41  VFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  +G NPPHTHPR +EILV++EGTL VGFVSSNQD NRLF+KVL+ GDVFVFP G++HF
Sbjct: 101 YAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q NVG+  AVA AGLSSQN GV+TIANTVFGS P I  +++A+AFQ +A+++  +QAKF
Sbjct: 161 QVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

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BLAST of Chy2G023400 vs. ExPASy Swiss-Prot
Match: P92999 (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana OX=3702 GN=GLP2A PE=2 SV=2)

HSP 1 Score: 245.0 bits (624), Expect = 6.7e-64
Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  V A+DFF SGL+ P  TNN VGS VT VNV  +PGLNT+GISLVRID
Sbjct: 41  VFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  +G NPPHTHPR +EILV++EGTL VGFVSSNQD NRLF+KVL+ GDVFVFP G++HF
Sbjct: 101 YAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q NVG+  AVA AGLSSQN GV+TIANTVFGS P I  +++A+AFQ +A+++  +QAKF
Sbjct: 161 QVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

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BLAST of Chy2G023400 vs. ExPASy TrEMBL
Match: A0A0A0KM80 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G525620 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.7e-89
Identity = 168/179 (93.85%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCKNP DVTAEDFF+SGLHTP  TNNPVGS VTA+NVGNLPGLNTLGIS+VRID
Sbjct: 41  VKVNGFVCKNPADVTAEDFFKSGLHTPGDTNNPVGSNVTALNVGNLPGLNTLGISMVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           YGR GIN PHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF
Sbjct: 101 YGRYGINAPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPT IIAKAF+TEAAIIAAIQAKF
Sbjct: 161 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTGIIAKAFKTEAAIIAAIQAKF 219

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BLAST of Chy2G023400 vs. ExPASy TrEMBL
Match: A0A5D3CN74 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009720 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.3e-89
Identity = 167/179 (93.30%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCKNP +VTAEDFFRSGLH PR TNNPVGS VTAVNV NLPGLNTLGIS+VRID
Sbjct: 41  VKVNGFVCKNPINVTAEDFFRSGLHIPRDTNNPVGSNVTAVNVANLPGLNTLGISMVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           YGR GINPPHTHPRATEILVV+EGTLLVGFVSSNQDGNRLFSKVLN+GDVFVFPEGLVHF
Sbjct: 101 YGRMGINPPHTHPRATEILVVLEGTLLVGFVSSNQDGNRLFSKVLNRGDVFVFPEGLVHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           QQNVGR NAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEA+IIAAIQAKF
Sbjct: 161 QQNVGRRNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEASIIAAIQAKF 219

[Close]

BLAST of Chy2G023400 vs. ExPASy TrEMBL
Match: A0A1S3AZ03 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103484302 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.3e-89
Identity = 167/179 (93.30%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCKNP +VTAEDFFRSGLH PR TNNPVGS VTAVNV NLPGLNTLGIS+VRID
Sbjct: 41  VKVNGFVCKNPINVTAEDFFRSGLHIPRDTNNPVGSNVTAVNVANLPGLNTLGISMVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           YGR GINPPHTHPRATEILVV+EGTLLVGFVSSNQDGNRLFSKVLN+GDVFVFPEGLVHF
Sbjct: 101 YGRMGINPPHTHPRATEILVVLEGTLLVGFVSSNQDGNRLFSKVLNRGDVFVFPEGLVHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           QQNVGR NAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEA+IIAAIQAKF
Sbjct: 161 QQNVGRRNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEASIIAAIQAKF 219

[Close]

BLAST of Chy2G023400 vs. ExPASy TrEMBL
Match: A0A6J1EF23 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433738 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.8e-72
Identity = 142/179 (79.33%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCK+P  V A DFF SGL TP      VGS V  VNV NLPGLNTLGIS+VRID
Sbjct: 40  VKVNGFVCKDPMHVNANDFFASGLQTPADIKKDVGSAVKTVNVDNLPGLNTLGISMVRID 99

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           +   GINPPHTHPRATEIL ++EGTLLVGFVSSNQDGNRLFSKVL KGDVFVFPEG+VHF
Sbjct: 100 FVPQGINPPHTHPRATEILTLLEGTLLVGFVSSNQDGNRLFSKVLYKGDVFVFPEGMVHF 159

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           QQNVG  NAVAIA LSSQN GV+TIANTVFGSKPDIP DI+AKAF+T A IIAAIQAKF
Sbjct: 160 QQNVGYENAVAIAALSSQNAGVITIANTVFGSKPDIPIDILAKAFRTHAHIIAAIQAKF 218

[Close]

BLAST of Chy2G023400 vs. ExPASy TrEMBL
Match: A0A6J1KXN8 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497279 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 9.4e-69
Identity = 136/179 (75.98%), Postives = 149/179 (83.24%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCK+P  V A+DFF SGL TP      VGS V  +NV NL GLNTLGIS+VRID
Sbjct: 40  VKVNGFVCKDPMQVNADDFFASGLQTPAEIKKEVGSGVKTINVDNLRGLNTLGISMVRID 99

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           +   GINPPHTHPRATEIL ++EGTLLVGFVSSNQDGNRLFSKVL KGDVFVFPEG+VHF
Sbjct: 100 FIPQGINPPHTHPRATEILTLLEGTLLVGFVSSNQDGNRLFSKVLYKGDVFVFPEGMVHF 159

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           QQNVG  NAVAIA LSSQN GV+TI +TVFGS+P IP DI+AKAF+T A IIAAIQAKF
Sbjct: 160 QQNVGYENAVAIAALSSQNAGVITIGDTVFGSEPAIPIDILAKAFRTHAHIIAAIQAKF 218

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BLAST of Chy2G023400 vs. NCBI nr
Match: XP_004134896.1 (germin-like protein 8-2 [Cucumis sativus] >KGN49477.1 hypothetical protein Csa_003914 [Cucumis sativus])

HSP 1 Score: 337 bits (863), Expect = 1.87e-115
Identity = 168/179 (93.85%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCKNP DVTAEDFF+SGLHTP  TNNPVGS VTA+NVGNLPGLNTLGIS+VRID
Sbjct: 41  VKVNGFVCKNPADVTAEDFFKSGLHTPGDTNNPVGSNVTALNVGNLPGLNTLGISMVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           YGR GIN PHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF
Sbjct: 101 YGRYGINAPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 182
           QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPT IIAKAF+TEAAIIAAIQAKF
Sbjct: 161 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTGIIAKAFKTEAAIIAAIQAKF 219

[Close]

BLAST of Chy2G023400 vs. NCBI nr
Match: XP_008439536.1 (PREDICTED: germin-like protein 8-2 [Cucumis melo] >KAA0052475.1 germin-like protein 8-2 [Cucumis melo var. makuwa] >TYK13347.1 germin-like protein 8-2 [Cucumis melo var. makuwa])

HSP 1 Score: 336 bits (861), Expect = 3.64e-115
Identity = 167/179 (93.30%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCKNP +VTAEDFFRSGLH PR TNNPVGS VTAVNV NLPGLNTLGIS+VRID
Sbjct: 41  VKVNGFVCKNPINVTAEDFFRSGLHIPRDTNNPVGSNVTAVNVANLPGLNTLGISMVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           YGR GINPPHTHPRATEILVV+EGTLLVGFVSSNQDGNRLFSKVLN+GDVFVFPEGLVHF
Sbjct: 101 YGRMGINPPHTHPRATEILVVLEGTLLVGFVSSNQDGNRLFSKVLNRGDVFVFPEGLVHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 182
           QQNVGR NAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEA+IIAAIQAKF
Sbjct: 161 QQNVGRRNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEASIIAAIQAKF 219

[Close]

BLAST of Chy2G023400 vs. NCBI nr
Match: XP_038881466.1 (germin-like protein subfamily 1 member 7, partial [Benincasa hispida])

HSP 1 Score: 324 bits (831), Expect = 3.59e-111
Identity = 162/180 (90.00%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 3   AVKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRI 62
           AVKVNGFVCKNP DVTAEDFF+SGLH PR T NPVGS VTAVNV NL GLNTLGISLVRI
Sbjct: 2   AVKVNGFVCKNPIDVTAEDFFKSGLHIPRDTKNPVGSNVTAVNVNNLHGLNTLGISLVRI 61

Query: 63  DYGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVH 122
           DYGR GINPPHTHPRATEIL V+EGTLLVGFVSSNQDGNRLFSKVLN+GDVFVFPEGLVH
Sbjct: 62  DYGRMGINPPHTHPRATEILFVLEGTLLVGFVSSNQDGNRLFSKVLNRGDVFVFPEGLVH 121

Query: 123 FQQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 182
           FQQNVG HNAVA AGLSSQNPGVVTIA+TVFGSKP IPTDIIAKAFQTEA+IIAAIQA F
Sbjct: 122 FQQNVGHHNAVAFAGLSSQNPGVVTIADTVFGSKPHIPTDIIAKAFQTEASIIAAIQANF 181

[Close]

BLAST of Chy2G023400 vs. NCBI nr
Match: XP_022926682.1 (germin-like protein subfamily 1 member 7 [Cucurbita moschata])

HSP 1 Score: 281 bits (719), Expect = 1.49e-93
Identity = 142/179 (79.33%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCK+P  V A DFF SGL TP      VGS V  VNV NLPGLNTLGIS+VRID
Sbjct: 40  VKVNGFVCKDPMHVNANDFFASGLQTPADIKKDVGSAVKTVNVDNLPGLNTLGISMVRID 99

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           +   GINPPHTHPRATEIL ++EGTLLVGFVSSNQDGNRLFSKVL KGDVFVFPEG+VHF
Sbjct: 100 FVPQGINPPHTHPRATEILTLLEGTLLVGFVSSNQDGNRLFSKVLYKGDVFVFPEGMVHF 159

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 182
           QQNVG  NAVAIA LSSQN GV+TIANTVFGSKPDIP DI+AKAF+T A IIAAIQAKF
Sbjct: 160 QQNVGYENAVAIAALSSQNAGVITIANTVFGSKPDIPIDILAKAFRTHAHIIAAIQAKF 218

[Close]

BLAST of Chy2G023400 vs. NCBI nr
Match: KAG6594416.1 (Germin-like protein subfamily 1 member 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281 bits (719), Expect = 3.24e-93
Identity = 142/179 (79.33%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           VKVNGFVCK+P  V A DFF SGL TP      VGS VT VNV NLPGLNTLGIS+VRID
Sbjct: 63  VKVNGFVCKDPMHVNANDFFASGLQTPGDIKKDVGSAVTTVNVDNLPGLNTLGISMVRID 122

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           +   GINPPHTHPRATEIL ++EGTLLVGFVSSNQDGNRLFSKVL KGDVFVFPEG+VHF
Sbjct: 123 FVPQGINPPHTHPRATEILTLLEGTLLVGFVSSNQDGNRLFSKVLYKGDVFVFPEGMVHF 182

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 182
           Q NVG  NAVAIA LSSQN GV+TIANTVFGSKPDIP DI+AKAF+T A IIAAIQAKF
Sbjct: 183 QHNVGYENAVAIAALSSQNAGVITIANTVFGSKPDIPIDILAKAFRTHAHIIAAIQAKF 241

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BLAST of Chy2G023400 vs. TAIR 10
Match: AT4G14630.1 (germin-like protein 9 )

HSP 1 Score: 248.8 bits (634), Expect = 3.3e-66
Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  V A+DFF S L+ P  TNN VGS VT VNV NL GLNTLGISLVRID
Sbjct: 44  VFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRID 103

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  NG NPPHTHPRATEILVV +GTLLVGF+SSNQDGNRLF+K LN GDVFVFPEGL+HF
Sbjct: 104 YAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHF 163

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q N+G   AVAIA LSSQN GV+TIANT+FGSKPD+  +++A+AFQ +   +  +QA+F
Sbjct: 164 QFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222

[Close]

BLAST of Chy2G023400 vs. TAIR 10
Match: AT5G38940.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 9.6e-66
Identity = 128/179 (71.51%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  VTA+DFF SGL T R   +PVGSTVTAVNV NL GLNTLGISLVRID
Sbjct: 44  VFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRID 103

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  NG NPPHTHPRATEILVV +GTLLVGFV+SN D NRLFSKVLN+GDVFVFPEGL+HF
Sbjct: 104 YAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNPD-NRLFSKVLNEGDVFVFPEGLIHF 163

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q N+G+  AVA A LSSQNPGV+TIANTVFG+ P I   I+AKAFQ    ++  +Q KF
Sbjct: 164 QANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]

BLAST of Chy2G023400 vs. TAIR 10
Match: AT5G39190.1 (germin-like protein 2 )

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-65
Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  V A+DFF SGL+ P  TNN VGS VT VNV  +PGLNT+GISLVRID
Sbjct: 41  VFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  +G NPPHTHPR +EILV++EGTL VGFVSSNQD NRLF+KVL+ GDVFVFP G++HF
Sbjct: 101 YAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q NVG+  AVA AGLSSQN GV+TIANTVFGS P I  +++A+AFQ +A+++  +QAKF
Sbjct: 161 QVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of Chy2G023400 vs. TAIR 10
Match: AT5G39160.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 245.0 bits (624), Expect = 4.8e-65
Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  V A+DFF SGL+ P  TNN VGS VT VNV  +PGLNT+GISLVRID
Sbjct: 41  VFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  +G NPPHTHPR +EILV++EGTL VGFVSSNQD NRLF+KVL+ GDVFVFP G++HF
Sbjct: 101 YAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q NVG+  AVA AGLSSQN GV+TIANTVFGS P I  +++A+AFQ +A+++  +QAKF
Sbjct: 161 QVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

[Close]

BLAST of Chy2G023400 vs. TAIR 10
Match: AT5G39130.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 1.4e-64
Identity = 118/179 (65.92%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 4   VKVNGFVCKNPTDVTAEDFFRSGLHTPRGTNNPVGSTVTAVNVGNLPGLNTLGISLVRID 63
           V VNG  CK+P  V A+DFF SGL+ P  TNN VGS VT VNV  +PGLNT+GISLVRID
Sbjct: 41  VFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRID 100

Query: 64  YGRNGINPPHTHPRATEILVVIEGTLLVGFVSSNQDGNRLFSKVLNKGDVFVFPEGLVHF 123
           Y  +G NPPHTHPR +EILV++EGTL VGFVSSNQD NRLF+KVL+ GDVFVFP G++HF
Sbjct: 101 YAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160

Query: 124 QQNVGRHNAVAIAGLSSQNPGVVTIANTVFGSKPDIPTDIIAKAFQTEAAIIAAIQAKF 183
           Q N+G+  A+A AGLSSQN GV+TIANTVFGS P I  +++A+AFQ +A ++  +QAKF
Sbjct: 161 QLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219

The following BLAST results are available for this feature:

BLAST of Chy2G023400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEA7	4.7e-65	69.27	Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana OX=3702 GN=GLP9...	[more]
Q9FMA8	1.4e-64	71.51	Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana OX=3702 GN=At5...	[more]
Q6K5P8	3.0e-64	68.16	Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
P92996	5.1e-64	67.04	Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana OX=3702 GN=GLP...	[more]
P92999	6.7e-64	67.04	Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana OX=3702 GN=GLP...	[more]

BLAST of Chy2G023400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM80	3.7e-89	93.85	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G525620 PE=3 SV=1	[more]
A0A5D3CN74	6.3e-89	93.30	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G...	[more]
A0A1S3AZ03	6.3e-89	93.30	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103484302 PE=3 SV=1	[more]
A0A6J1EF23	1.8e-72	79.33	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433738 PE=3 SV=1	[more]
A0A6J1KXN8	9.4e-69	75.98	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497279 PE=3 SV=1	[more]

BLAST of Chy2G023400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134896.1	1.87e-115	93.85	germin-like protein 8-2 [Cucumis sativus] >KGN49477.1 hypothetical protein Csa_0...	[more]
XP_008439536.1	3.64e-115	93.30	PREDICTED: germin-like protein 8-2 [Cucumis melo] >KAA0052475.1 germin-like prot...	[more]
XP_038881466.1	3.59e-111	90.00	germin-like protein subfamily 1 member 7, partial [Benincasa hispida]	[more]
XP_022926682.1	1.49e-93	79.33	germin-like protein subfamily 1 member 7 [Cucurbita moschata]	[more]
KAG6594416.1	3.24e-93	79.33	Germin-like protein subfamily 1 member 7, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Chy2G023400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14630.1	3.3e-66	69.27	germin-like protein 9	[more]
AT5G38940.1	9.6e-66	71.51	RmlC-like cupins superfamily protein	[more]
AT5G39190.1	3.7e-65	67.04	germin-like protein 2	[more]
AT5G39160.1	4.8e-65	67.04	RmlC-like cupins superfamily protein	[more]
AT5G39130.1	1.4e-64	65.92	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 139..154 score: 50.15 coord: 73..93 score: 67.55 coord: 106..126 score: 63.57
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 25..176 e-value: 8.4E-37 score: 138.3
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 26..171 e-value: 5.7E-50 score: 168.8
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 1..182 e-value: 6.6E-82 score: 275.8
None	No IPR available	PANTHER	PTHR31238:SF225	GERMIN-LIKE PROTEIN	coord: 3..182
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 3..182
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 2..170 e-value: 7.58236E-81 score: 236.338
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 68..81
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 17..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G023400.1	Chy2G023400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding