![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Chy2G023120 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCTTCCTAAACTAGCTCAATGTAAACTTCTCAAGAATAGTTGTTTGATTCCTCACTACCCTCTTTACTCATAACCGCTGGTCATTACCAAATCACTCACATTACCTCTGATTGGTTCCTTTAAGATAGTAATCTTTCTTTTTAGCAAAAATATCACTTCATATTGGTTGTTATTGTGTGGATATCATCATATTACTATCATCTTTTATTGGCCTTTTATTCATTCTTATAGTTTTGATCTTCTACTTTTTGTTGACAATAACCGTCTTTTCTTTTCCTCTACTTTCTTCTTCCCTTTTATTTGCTTGTGTTTGATTACATTTCTCAGTAAATACTCTTCTTGGGCAGGTTCAACACAATTGAACCCTCATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATTGCTATCTATATTATAATGGCAATGAAAGAACCTTCTAGTAAACATGAACCGGATCCTACATTCCTTGCCGAGGCGAAGGCTAGCATAAACCAGTCTACTGGGAAAGCAGATGGCCCCTCGCAAGCTCACAATAAGAAGGAAGAATAG ATGTTTCTTCCTAAACTAGCTCAATGTTCAACACAATTGAACCCTCATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATTGCTATCTATATTATAATGGCAATGAAAGAACCTTCTAGTAAACATGAACCGGATCCTACATTCCTTGCCGAGGCGAAGGCTAGCATAAACCAGTCTACTGGGAAAGCAGATGGCCCCTCGCAAGCTCACAATAAGAAGGAAGAATAG ATGTTTCTTCCTAAACTAGCTCAATGTTCAACACAATTGAACCCTCATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATTGCTATCTATATTATAATGGCAATGAAAGAACCTTCTAGTAAACATGAACCGGATCCTACATTCCTTGCCGAGGCGAAGGCTAGCATAAACCAGTCTACTGGGAAAGCAGATGGCCCCTCGCAAGCTCACAATAAGAAGGAAGAATAG MFLPKLAQCSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPTFLAEAKASINQSTGKADGPSQAHNKKEE* Homology
BLAST of Chy2G023120 vs. ExPASy TrEMBL
Match: A0A0A0KPB7 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucumis sativus OX=3659 GN=Csa_6G526400 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.6e-29 Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of Chy2G023120 vs. ExPASy TrEMBL
Match: A0A1S4DTT6 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucumis melo OX=3656 GN=LOC103484273 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.8e-28 Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0
BLAST of Chy2G023120 vs. ExPASy TrEMBL
Match: A0A5A7UE48 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0010040 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.8e-28 Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0
BLAST of Chy2G023120 vs. ExPASy TrEMBL
Match: A0A6J1EJT7 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucurbita moschata OX=3662 GN=LOC111433255 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.4e-26 Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Chy2G023120 vs. ExPASy TrEMBL
Match: A0A6J1ISV9 (Vacuolar ATPase assembly integral membrane protein VMA21 homolog OS=Cucurbita maxima OX=3661 GN=LOC111478118 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.9e-25 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Chy2G023120 vs. NCBI nr
Match: XP_004134542.1 (uncharacterized protein LOC101206493 [Cucumis sativus] >XP_011658340.1 uncharacterized protein LOC101206493 [Cucumis sativus] >KAE8647778.1 hypothetical protein Csa_003577 [Cucumis sativus]) HSP 1 Score: 135 bits (340), Expect = 3.60e-39 Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of Chy2G023120 vs. NCBI nr
Match: XP_008439487.1 (PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo] >XP_008439488.1 PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo] >XP_008439489.1 PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo] >XP_016899373.1 PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo] >XP_016899374.1 PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo]) HSP 1 Score: 132 bits (332), Expect = 5.97e-38 Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0
BLAST of Chy2G023120 vs. NCBI nr
Match: KAA0052446.1 (hypothetical protein E6C27_scaffold120G00430 [Cucumis melo var. makuwa] >TYK13376.1 hypothetical protein E5676_scaffold255G0010040 [Cucumis melo var. makuwa]) HSP 1 Score: 132 bits (332), Expect = 7.15e-37 Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0
BLAST of Chy2G023120 vs. NCBI nr
Match: KAG6581507.1 (hypothetical protein SDJN03_21509, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129 bits (324), Expect = 9.56e-36 Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 0
BLAST of Chy2G023120 vs. NCBI nr
Match: XP_022926009.1 (uncharacterized protein LOC111433255 [Cucurbita moschata] >XP_022926010.1 uncharacterized protein LOC111433255 [Cucurbita moschata] >XP_023543189.1 uncharacterized protein LOC111803138 [Cucurbita pepo subsp. pepo] >KAG7034797.1 hypothetical protein SDJN02_04529 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 126 bits (316), Expect = 1.64e-35 Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Chy2G023120 vs. TAIR 10
Match: AT1G05780.1 (Vacuolar ATPase assembly integral membrane protein VMA21-like domain ) HSP 1 Score: 82.0 bits (201), Expect = 2.4e-16 Identity = 45/73 (61.64%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of Chy2G023120 vs. TAIR 10
Match: AT2G31710.1 (Vacuolar ATPase assembly integral membrane protein VMA21-like domain ) HSP 1 Score: 80.1 bits (196), Expect = 9.2e-16 Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|