![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Chy2G023100 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGCTTCTTCGTTCATGGAGCCCTCGCCTTCACCTTCCCTTAATCCATCCCCAAGCGTGTCTATCACGGACTCTCACGAGCATGAACTAGGTGGCAACTTCAACCTCATTGTTCTCGTGGTTGCAATTGTTTGCGCTGTTGTTTGCACGCTTGGTCTAAATACCATGCTGATATGTATACTTCAATGTGCGAATCACTCTCTTAGACAAACAGTCCAATGGGTGGCTTTAAGGGGACTGAACTCAGGCATGAAGAAGCAAGACATGGTTGCCCTCCCAACTTCAACTTACACAAACTCTGGATCACCGATTTCGCCTTCATCCACTTCAGCCTGTGCTATCTGCCTCATCGACTTCTCAAACGGGGATAAAGTACGAGTGCTGCCGAACTGTGCTCATAGGTATCATGTCAGTTGCATTGATAAATGGTTGCTGTCTCACTCATCTTGCCCCACCTGCAGGCATCAGCTCAAGTCCAAGAATTCTATAGATCACATTGTGTAATGATGTCAAGTAAAATTGAACAAGTGAAGAAGCAGTAG ATGCTTGCTTCTTCGTTCATGGAGCCCTCGCCTTCACCTTCCCTTAATCCATCCCCAAGCGTGTCTATCACGGACTCTCACGAGCATGAACTAGGTGGCAACTTCAACCTCATTGTTCTCGTGGTTGCAATTGTTTGCGCTGTTGTTTGCACGCTTGGTCTAAATACCATGCTGATATGTATACTTCAATGTGCGAATCACTCTCTTAGACAAACAGTCCAATGGGTGGCTTTAAGGGGACTGAACTCAGGCATGAAGAAGCAAGACATGGTTGCCCTCCCAACTTCAACTTACACAAACTCTGGATCACCGATTTCGCCTTCATCCACTTCAGCCTGTGCTATCTGCCTCATCGACTTCTCAAACGGGGATAAAGCATCAGCTCAAGTCCAAGAATTCTATAGATCACATTGTGTAATGATGTCAAGTAAAATTGAACAAGTGAAGAAGCAGTAG ATGCTTGCTTCTTCGTTCATGGAGCCCTCGCCTTCACCTTCCCTTAATCCATCCCCAAGCGTGTCTATCACGGACTCTCACGAGCATGAACTAGGTGGCAACTTCAACCTCATTGTTCTCGTGGTTGCAATTGTTTGCGCTGTTGTTTGCACGCTTGGTCTAAATACCATGCTGATATGTATACTTCAATGTGCGAATCACTCTCTTAGACAAACAGTCCAATGGGTGGCTTTAAGGGGACTGAACTCAGGCATGAAGAAGCAAGACATGGTTGCCCTCCCAACTTCAACTTACACAAACTCTGGATCACCGATTTCGCCTTCATCCACTTCAGCCTGTGCTATCTGCCTCATCGACTTCTCAAACGGGGATAAAGCATCAGCTCAAGTCCAAGAATTCTATAGATCACATTGTGTAATGATGTCAAGTAAAATTGAACAAGTGAAGAAGCAGTAG MLASSFMEPSPSPSLNPSPSVSITDSHEHELGGNFNLIVLVVAIVCAVVCTLGLNTMLICILQCANHSLRQTVQWVALRGLNSGMKKQDMVALPTSTYTNSGSPISPSSTSACAICLIDFSNGDKASAQVQEFYRSHCVMMSSKIEQVKKQ* Homology
BLAST of Chy2G023100 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06 Identity = 31/118 (26.27%), Postives = 60/118 (50.85%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 5.9e-05 Identity = 30/102 (29.41%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.3e-04 Identity = 35/118 (29.66%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.8e-04 Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 8.5e-04 Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy TrEMBL
Match: A0A0A0KJ24 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G526420 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 3.3e-59 Identity = 125/137 (91.24%), Postives = 126/137 (91.97%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy TrEMBL
Match: A0A5A7UAN6 (RING-H2 finger protein ATL74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0010060 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.4e-54 Identity = 115/124 (92.74%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy TrEMBL
Match: A0A1S3AYW1 (RING-H2 finger protein ATL74-like OS=Cucumis melo OX=3656 GN=LOC103484271 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53 Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy TrEMBL
Match: A0A6J1ILJ0 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111478116 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.5e-43 Identity = 98/127 (77.17%), Postives = 106/127 (83.46%), Query Frame = 0
BLAST of Chy2G023100 vs. ExPASy TrEMBL
Match: E5GCL9 (Ring zinc finger OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 9.6e-43 Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Chy2G023100 vs. NCBI nr
Match: XP_031743035.1 (RING-H2 finger protein ATL73 [Cucumis sativus]) HSP 1 Score: 278 bits (711), Expect = 7.15e-94 Identity = 146/151 (96.69%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of Chy2G023100 vs. NCBI nr
Match: KAE8647779.1 (hypothetical protein Csa_003277 [Cucumis sativus]) HSP 1 Score: 226 bits (577), Expect = 2.73e-73 Identity = 119/131 (90.84%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of Chy2G023100 vs. NCBI nr
Match: KAA0052444.1 (RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa] >TYK13378.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]) HSP 1 Score: 221 bits (562), Expect = 6.41e-71 Identity = 115/124 (92.74%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Chy2G023100 vs. NCBI nr
Match: XP_008439485.1 (PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo]) HSP 1 Score: 217 bits (553), Expect = 1.61e-69 Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of Chy2G023100 vs. NCBI nr
Match: XP_022977991.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima]) HSP 1 Score: 184 bits (468), Expect = 1.94e-56 Identity = 98/127 (77.17%), Postives = 106/127 (83.46%), Query Frame = 0
BLAST of Chy2G023100 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.8e-07 Identity = 31/118 (26.27%), Postives = 60/118 (50.85%), Query Frame = 0
BLAST of Chy2G023100 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 4.2e-06 Identity = 30/102 (29.41%), Postives = 60/102 (58.82%), Query Frame = 0
BLAST of Chy2G023100 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 9.3e-06 Identity = 35/118 (29.66%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of Chy2G023100 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 2.7e-05 Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 0
BLAST of Chy2G023100 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A ) HSP 1 Score: 45.1 bits (105), Expect = 6.0e-05 Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|