Chy2G022930 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCAACGCTGTTGTCTTATTGCAATCCAAGTATAGCTTGTAATTACGGGAGGATGGATTTGAAACGCATGGCTCTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACAGTCTTTGCTGTTACCGAAGGTTCTGCAAAATCAAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAATTGGATTCAGATGAGCCTCCACCTTGGGCAAAGGAAGAAGGCAAGGAAATTGGAACCCAACAGGGATTTCAGGTCCCTTTCTATGTTTACTTGCTTGCCTCGTCTATCACTGCAATTGCTGCTGTAAGCTTCCCTTTAACTACAAGTTTTTTTTTTTGGGGATTTTTTGTAGTTATTTTTATGGTAACTGCTGCTGTGCTTCCAGTTTGCTCAGAATTAATAGAAGCAAACGACGCCATTATCTCTTGTTAATACAATCATTATATGAAATAAGGAGAAAACAACGTCGTTAGAATTTTAACTTGTAACGTTGTAATTTGATGTACTTCTGTTAAATCCCTACTATCTATGGTCAAAAGAATCCATTCACGGTTTTTGCAGACTGGATTGTGGGTAGAAGGAGCCTTTTTGTTTTTTTGGAAATATATGTCAACTTCTTGGGAAACTGTGGCCTATTTGGGAACCAATTGTTTGATAGCAGTCTCTAGTTGTTCCTTTAGCCTCTGTCATGTTTGTTAATATCCAGAATTAGGAGAGCGATGTGTTAAATTGGCAATCAACCTAAAGGTTATGATAAATTTAATTATACCAATACTTTAGCACTTCACTTCTCTTACCTTCTAGGAGATTCTCATTCAACAAGTGGAAATCCATATTTATTGGAGAGCAATTAGAGTTTGAACATAAGACCTTTTTACTCTCATGTCTTGGTAAGTTACCAATTAACTTCAACTCTTGTTATATAAAAAAAAAAAAAAAAAAAAAAGCTAAAGTTTTACTGTGTAATTTAATTATATCTATACCTCAACATGATTAAAAAATCATCTAATGCAGTAAAGCGGTAGAGGTGATTGTATGTAGTTAATTTATTTCTTCAACAATGTATGATCAATTTTGGTGCTGTGGATACTAATCCTAATTGAAGCCGTTTGTATGTTTGTTGGAATGACTTCCAAAATTGCAGATAGGTTCCGTATTTGAGTACGTGAACCAGAAGCCTGTCTTTGGAATTATAAATTCAGACAGCATATTGTACGCTCCATTGCTTGGATTTTTCGCATTTACTGGCATTCCGACTGCTGTAAGTTCCTCTGTCTCCAAGTTTTGACATTTGTGAAGGGATTATCACATATTTTCATAGCGTGAAATCATAAACATGACCTTTGGTGTGTCTCTAAAGAGCATAAGTATGGAGTATCCATCTTTCTGTGTTCTTTTGTTTGGGGAGAGGGGGGTGATTGTAAAAATGTAAAAATGTAAAAATGAGACTTGGTGCGCTCTTCTATGAGTTGCATAAATTCTTAGCTAGAAACTTTGCACGTAAGGAACTGTATTCCGTGTCAACTGCAAAGGAAGTAATAAGAAGAATGACAATACCTTTGCAAAAATACGAACTCTACTTACAAGGCTCTCTATCTAATTTCTCGAGACAGGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAG ATGTCTGCAACGCTGTTGTCTTATTGCAATCCAAGTATAGCTTGTAATTACGGGAGGATGGATTTGAAACGCATGGCTCTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACAGTCTTTGCTGTTACCGAAGGTTCTGCAAAATCAAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAATTGGATTCAGATGAGCCTCCACCTTGGGCAAAGGAAGAAGGCAAGGAAATTGGAACCCAACAGGGATTTCAGGTCCCTTTCTATGTTTACTTGCTTGCCTCGTCTATCACTGCAATTGCTGCTATAGGTTCCGTATTTGAGTACGTGAACCAGAAGCCTGTCTTTGGAATTATAAATTCAGACAGCATATTGTACGCTCCATTGCTTGGATTTTTCGCATTTACTGGCATTCCGACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAG ATGTCTGCAACGCTGTTGTCTTATTGCAATCCAAGTATAGCTTGTAATTACGGGAGGATGGATTTGAAACGCATGGCTCTCGGACATTTACGGTCTATTGGAAGGAGAAACAATGGCTATCGCAAGCTTACAGTCTTTGCTGTTACCGAAGGTTCTGCAAAATCAAGCGAGTCTGAAGAAACAATTCCTTCTTGGGCCAAATTGGATTCAGATGAGCCTCCACCTTGGGCAAAGGAAGAAGGCAAGGAAATTGGAACCCAACAGGGATTTCAGGTCCCTTTCTATGTTTACTTGCTTGCCTCGTCTATCACTGCAATTGCTGCTATAGGTTCCGTATTTGAGTACGTGAACCAGAAGCCTGTCTTTGGAATTATAAATTCAGACAGCATATTGTACGCTCCATTGCTTGGATTTTTCGCATTTACTGGCATTCCGACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAGGACAGAAGGGATGGTTACTTGTAG MSATLLSYCNPSIACNYGRMDLKRMALGHLRSIGRRNNGYRKLTVFAVTEGSAKSSESEETIPSWAKLDSDEPPPWAKEEGKEIGTQQGFQVPFYVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSILYAPLLGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL* Homology
BLAST of Chy2G022930 vs. ExPASy TrEMBL
Match: A0A0A0KIJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G527080 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Chy2G022930 vs. ExPASy TrEMBL
Match: A0A5A7UB84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00260 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Chy2G022930 vs. ExPASy TrEMBL
Match: A0A1S4DTF9 (uncharacterized protein LOC103484254 OS=Cucumis melo OX=3656 GN=LOC103484254 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Chy2G022930 vs. ExPASy TrEMBL
Match: A0A6J1IIG9 (uncharacterized protein LOC111477793 OS=Cucurbita maxima OX=3661 GN=LOC111477793 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82 Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Chy2G022930 vs. ExPASy TrEMBL
Match: A0A6J1EDF6 (uncharacterized protein LOC111433301 OS=Cucurbita moschata OX=3662 GN=LOC111433301 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82 Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 0
BLAST of Chy2G022930 vs. NCBI nr
Match: XP_004153846.1 (uncharacterized protein LOC101218426 isoform X2 [Cucumis sativus] >XP_031743761.1 uncharacterized protein LOC116401609 isoform X2 [Cucumis sativus] >KGN49525.1 hypothetical protein Csa_003345 [Cucumis sativus]) HSP 1 Score: 335 bits (860), Expect = 6.62e-116 Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Chy2G022930 vs. NCBI nr
Match: KAA0052430.1 (uncharacterized protein E6C27_scaffold120G00260 [Cucumis melo var. makuwa]) HSP 1 Score: 332 bits (850), Expect = 2.22e-114 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Chy2G022930 vs. NCBI nr
Match: XP_016899276.1 (PREDICTED: uncharacterized protein LOC103484254 [Cucumis melo]) HSP 1 Score: 332 bits (850), Expect = 7.04e-114 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Chy2G022930 vs. NCBI nr
Match: XP_038881100.1 (uncharacterized protein LOC120072709 isoform X2 [Benincasa hispida]) HSP 1 Score: 329 bits (843), Expect = 2.59e-113 Identity = 164/172 (95.35%), Postives = 167/172 (97.09%), Query Frame = 0
BLAST of Chy2G022930 vs. NCBI nr
Match: XP_023544716.1 (uncharacterized protein LOC111804219 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 313 bits (803), Expect = 3.25e-107 Identity = 156/171 (91.23%), Postives = 163/171 (95.32%), Query Frame = 0
BLAST of Chy2G022930 vs. TAIR 10
Match: AT3G51510.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 190.7 bits (483), Expect = 1.0e-48 Identity = 101/166 (60.84%), Postives = 119/166 (71.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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