![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Chy2G022860 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGTGCATTGTTTAATCAATCTTGCATTGGCTGCCATGACGGAGGGGGAAACATAATTCAGCCCGTTATTGCTACTATCTCTCCTTACACTACTCTTTAATTTGGATAAGCATCTTAGTAGTTAGTTCATGCTAATATTAACATGCTTTTCTGACTGTTTGAATTAGAATCGTACTCTGTTTATTTGTTTTGCACTGCCAACATCAGTGTCTTCCCTGGAACCTGTTTTATTTGTTTGATTCTGAACTTTTATTGATCATTCTATGATCTTACATTTATCTTCCAAATGTTGAACTTGAAGTGTGATGGTTTCGGTGTTTTCTTTTTTCCTTTTTGCTGTTCTTTCTGTGGAACATTTCTGCTACTTCTGTAACTGACTTTTTGTTTTCCTCTTTCCTAGGGTGCCACACTCTTTTCAAGTGATCTTGAAAGGTAATCTTCTAGAACTTGAGAAAACAATAAGGTTATTTATCAGTGTATGATCTCAGTTCAATGTGCGTACATCACTGTCTACTAGTATCATGAGGTATTAGAACACAGATCAACTCTCTCTTCTAAATCTATGATTAATTTTTAAAAAAAATTGTTTACTTTTTCTTATTGTGTAAGTGTGGCCATAGTCATATATTGATTAGATTGTAGATGAAGAAAGATTGTAGATTCATCGGTAAGGGTAATAGCTCTATCTATTGTTATATAGACATTTTGGTATGGCCCAAAAAATCTACATGGTCTTAACCCAAAAATGGGGTAAATCAAGCAAATATGCCTAAGAACTGATTTTCTTTCACCTAAAACACTTCACAATCACCTAAAATTGGTTGTGTCCAAACACCGGCACTTCGCCAATTTAGAAATGTCGTTAATTTATAATGCACGCCTTTAACAATTTTATTAGGAAAAAAAAAATCATCACAGTTTTATGGAGAGTCCAGATCAAATAACAGAGCTTTCAGAATTTCTCTGTATCCAGCCTAGCCATATGCTGAAATATGTTTTACACTTGTGTTTGTGAGGTGATTGAACAAAACTGAACGATAATGAATGATTGTTTGTTGTCTTAGTTCTAGAGTTTAAAAGCCATCTTTTATTAATTAAAGACGAAGAAAAAGCATTCGAGAACTCTATAAAATTTTCAAAGTTTTGGTTAATTGTTCTTTGTATAGAAATGGAGTTGATGCCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGGAGAATGCCTGTAAGTGATAATTTGATAATCTTATTCTATAAGCGTGGAAATATTTATATAAATATATCAACACGATGGGTTTCAGGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG ATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGGTGCCACACTCTTTTCAAGTGATCTTGAAAGGTAATCTTCTAGAACTTGAGAAAACAATAAGAAATGGAGTTGATGCCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG ATGTCTTGTGCTCGCCGAAACGATAGAAATAGAAAGAGGAGGGTGCCACACTCTTTTCAAGTGATCTTGAAAGGTAATCTTCTAGAACTTGAGAAAACAATAAGAAATGGAGTTGATGCCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGGAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG MSCARRNDRNRKRRVPHSFQVILKGNLLELEKTIRNGVDAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP* Homology
BLAST of Chy2G022860 vs. ExPASy Swiss-Prot
Match: Q93VA3 (Cytochrome c6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PETJ PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.1e-28 Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
BLAST of Chy2G022860 vs. ExPASy TrEMBL
Match: A0A1S3AYD3 (cytochrome c6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484246 PE=3 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 9.3e-31 Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. ExPASy TrEMBL
Match: A0A6J1KPJ4 (cytochrome c6, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497114 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. ExPASy TrEMBL
Match: A0A0A0KPD1 (Cytochrome c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G538600 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29 Identity = 64/79 (81.01%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of Chy2G022860 vs. ExPASy TrEMBL
Match: A0A6J1EG38 (cytochrome c6, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433859 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. ExPASy TrEMBL
Match: A0A6J1CXZ2 (cytochrome c6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015832 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28 Identity = 61/79 (77.22%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of Chy2G022860 vs. NCBI nr
Match: XP_008439440.1 (PREDICTED: cytochrome c6, chloroplastic [Cucumis melo] >XP_008439441.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]) HSP 1 Score: 144 bits (362), Expect = 2.01e-41 Identity = 65/79 (82.28%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. NCBI nr
Match: XP_038877732.1 (cytochrome c6, chloroplastic [Benincasa hispida]) HSP 1 Score: 143 bits (361), Expect = 2.61e-41 Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. NCBI nr
Match: KAG7026384.1 (Cytochrome c6, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140 bits (352), Expect = 2.54e-40 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. NCBI nr
Match: XP_023517564.1 (cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140 bits (352), Expect = 6.07e-40 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. NCBI nr
Match: XP_022926876.1 (cytochrome c6, chloroplastic [Cucurbita moschata]) HSP 1 Score: 140 bits (352), Expect = 6.07e-40 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Chy2G022860 vs. TAIR 10
Match: AT5G45040.1 (Cytochrome c ) HSP 1 Score: 124.4 bits (311), Expect = 5.0e-29 Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|