Chy2G022700 (gene) Cucumber (hystrix) v1

Overview


Name	Chy2G022700
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ycf3-interacting protein 1, chloroplastic
Location	chrH02: 50780 .. 53814 (+)
RNA-Seq Expression	Chy2G022700
Synteny	Chy2G022700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTGATGGCTCTTCAACACCTCCACTTCCCCTTCTCCACTTCCCCTTCTTCGTCCATCGAACACAATTACGATATTTCTCGTCGCTTCCGCCATCTTCCCCTTCCCAGTCATGGCACTCGCCCCCATCTCCCAGTTCCCTCTAGCCGCAATCGACGCTCTCTGGCCTGCGTTGGCAAGGAAGATACCCAGTTGCGTCAACCATCGTCCACCACAGATGAACAGCCTGACGCCCAATCCCTAGAATACATTCGTCAGATTCAAAGGGTCTGCTGTCTCTTTCTTTTACATTATCCCCTTCTTCTCCCTTCAGATTTCTTAACAGCCCTTTCTTGGCTGCCTCCTCCAGGTACTGGAGCTTCTCAAGAAAAACAGAGACATGCTCTTTAATGAGGTGACACCCCGGTTTCTGTTTTATACAATTTTAACTCTTTCGCATCCCTGGCGTTCTCACGGAGTTTGTAATTACTTCCTCCCTGCTTGAATTAACTTTTTGTTCCACTTCTTCTGCACCACCTTTCTTCCCATATTTGTCGTATCTTCTCTCTCTGGTTTCCAATGATAGAATTTGGGACATGAACTTAAGTCTCACATACAACTCCATTCCCTTCTATTGAAATTAACGCATGCTTCACTGCTATATCTGTGGATTCTGGTGCTTGTTTCTCTACTTTTCCCCCGCCGTTGAAATTCTCGATTATTATAGCTCATTCTGCACTACTTTCTTGATTTCTTTTTGTCTTTTACTCTTTGTGCTTATTCCCTCTCTTCATTTCGTATTCTTTAATTTAGTAGGTTAAACTTACCGTAATGATTGAAGATCCCCGGGAAGTTGAACGCCGGAGATTACTTGGAATTGACGAGGATGACGCCCCAACAAGGGATGATTTAGCCGCCACTCTTGAAGAAGTGAGAAATTTTAGTTTTCTCAAAATTTAAAATTTGATGATAAGGTTCACAATTTCCAACCATATACCTGTGACGTCTGCAATCTTGATCTCAAATCAAAGCTTTATATGTAGCTAGGGAAAATTGGAAACACGAGGCAGTGGATTCTTAAAAGTATTTGATGCAATTGTAGACAGCTTCTCCTGATGAAGTATAGGTGAAATTGAAATGTATTACAATTGATGTGCCTCTTGGCTGCCGACATCTGCCTATCTTACCAAGTTCAAACTACTTTGATAAAAAAAATTAAGCGATGATCTTATTCTATTTGAGCAAGGAAGAAAAGTCCCTTCTCTAATTGCGTGCAACATGTATACCCTTGATGCTCTGCATATTAGCCCTCCAATTGTTGCACTGAATGCTCGCCCTGACATAGTTAATTCTCTGTGATATGACTAATACAGACATATGAAGGAGATGTGTTTGAACAGAAAGCAAAATGTAGAAGTAGATTCTGTATGTTAAGTTTAGCATTCTTGTATACTATTAGTATTCACTTTCATTTGCTACTCTACTAGGTCAATGCAGGAAAGTTCCCAAAAAATCGAGTGGCTCTCCAAATGCTAGCTGAAGAGATGACCAATTGGCCCAATTTGGAGGTATTATTTGTTATTTCTTCAGGTTTTGATAATTTTGAAATTCCACGCCTGACCTGATATGGTAAAATCCTACTTTTATTAGATTCGAGGATATACTACTTGCACTTCCATTGCTAACATAATAGTGCTATCCTTTTGAGAGGCAAAGCACTCATTGCAATTTTTTTGGTGATTAGATATGGATTTATGATGGCGCTAAATTGTTTTTATACTAAAAGCCACATTGATGAATCTTCTGATTATTCATTATTATTTTGGCTCTAATTACTGTAGTTTTGTTTTTGTATGACCTATCTGTTGTCCAAGGTTTCAGTTATAGCCGCTGTATTTGGATATCTAGATAGATGAAGAGAGACAACCTAAATATGACAATGGAGATCGCAACTATTGGATAGAAGAGGAGATGTAGATGGATAATAGACAATAACAAAAAAGTAATCCCGTGGGGCAGATTTTTGGATATCTTTTGATTATGAGCAAAGTTTCTGGCAGATTTTTGCCCCATGACACTTCAAACAATTCCGATTATTACCAAGCCTCATTCAGAACTAAGAGCGAAATTTCTCAGAGATATATGCGAGGAATAGCTTTTGCTTCGTGATTATAGTCGAACTACATGAACTCAAAATTATTAAAGAGATTTCTGTCTTATATGCATGAGTCTGCCTGTATGCTTAGCAAAGACTGCATAAGCTTTCATTAACTTACGGCTTGAATAGTAGTTTAAACAAAGTACTAATTGTTGGGATGGGAAATGGTGTGTTCTTATCCTCTTTCCAAATATGGAAATAAATTTCTGGTTGAAACAAATCGCCGGCTTTTTATTTCTGTTGTGTTTATATTATCATCTGGCAAGGGTCAGTCGGCATGGTTTTCGCTCCATTTTGATTATCTTGACATTTCTCTTATATCCGCCCTTTTCTTTCTCTCCATGACGTTTCTGTGATTTTTTCAAATTATAAGGTTTATCAGATGCTGTTAGGTTTACACTTGTGTGTTAAATTTAGGTTTCTGATTGTGGTGTTTGTATGTGTAGGCTGAGTCACCCAAGAAGAAACGCAGTAAATCGTTGTATGCAAAAGCCACGGACACTGGTGTGAATCCTCGAGAGGCTGCAAAGAGACTAAACATCGATTGGGACACTGCAGCTGAGATTGAAGATGCCGACTTCAGTGATGACCCAGAAGTGCCTGCTGCTGTGGTTTGTTTTCTTTGTCCCTCATTCTTTAGTCGAACTTATTATTGTGATAATTCTCTCCGGACATCATGGATTTGTCGCCTCAATGATGTTAGGGTAGTAGTGCAGTACTGTAATTATGTTAATGGTAAATGAGAGAAAAACATTTGCATGATATCACAATTGCTGATGAGGAAATTAAAATTGAATTGATGCAGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCGGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACAATTCTCTTCAATAG

mRNA sequence

ATGGCAGTGATGGCTCTTCAACACCTCCACTTCCCCTTCTCCACTTCCCCTTCTTCGTCCATCGAACACAATTACGATATTTCTCGTCGCTTCCGCCATCTTCCCCTTCCCAGTCATGGCACTCGCCCCCATCTCCCAGTTCCCTCTAGCCGCAATCGACGCTCTCTGGCCTGCGTTGGCAAGGAAGATACCCAGTTGCGTCAACCATCGTCCACCACAGATGAACAGCCTGACGCCCAATCCCTAGAATACATTCGTCAGATTCAAAGGGTACTGGAGCTTCTCAAGAAAAACAGAGACATGCTCTTTAATGAGGTTAAACTTACCGTAATGATTGAAGATCCCCGGGAAGTTGAACGCCGGAGATTACTTGGAATTGACGAGGATGACGCCCCAACAAGGGATGATTTAGCCGCCACTCTTGAAGAAGTCAATGCAGGAAAGTTCCCAAAAAATCGAGTGGCTCTCCAAATGCTAGCTGAAGAGATGACCAATTGGCCCAATTTGGAGGCTGAGTCACCCAAGAAGAAACGCAGTAAATCGTTGTATGCAAAAGCCACGGACACTGGTGTGAATCCTCGAGAGGCTGCAAAGAGACTAAACATCGATTGGGACACTGCAGCTGAGATTGAAGATGCCGACTTCAGTGATGACCCAGAAGTGCCTGCTGCTGTGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCGGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACAATTCTCTTCAATAG

Coding sequence (CDS)

ATGGCAGTGATGGCTCTTCAACACCTCCACTTCCCCTTCTCCACTTCCCCTTCTTCGTCCATCGAACACAATTACGATATTTCTCGTCGCTTCCGCCATCTTCCCCTTCCCAGTCATGGCACTCGCCCCCATCTCCCAGTTCCCTCTAGCCGCAATCGACGCTCTCTGGCCTGCGTTGGCAAGGAAGATACCCAGTTGCGTCAACCATCGTCCACCACAGATGAACAGCCTGACGCCCAATCCCTAGAATACATTCGTCAGATTCAAAGGGTACTGGAGCTTCTCAAGAAAAACAGAGACATGCTCTTTAATGAGGTTAAACTTACCGTAATGATTGAAGATCCCCGGGAAGTTGAACGCCGGAGATTACTTGGAATTGACGAGGATGACGCCCCAACAAGGGATGATTTAGCCGCCACTCTTGAAGAAGTCAATGCAGGAAAGTTCCCAAAAAATCGAGTGGCTCTCCAAATGCTAGCTGAAGAGATGACCAATTGGCCCAATTTGGAGGCTGAGTCACCCAAGAAGAAACGCAGTAAATCGTTGTATGCAAAAGCCACGGACACTGGTGTGAATCCTCGAGAGGCTGCAAAGAGACTAAACATCGATTGGGACACTGCAGCTGAGATTGAAGATGCCGACTTCAGTGATGACCCAGAAGTGCCTGCTGCTGTGGGATATGGAGCACTGTACATAGTGACAGCGTTTCCGGTGATAATTGGCATCTCAGTAGTTCTAATCCTTTTCTACAATTCTCTTCAATAG

Protein sequence

MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVGKEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVIIGISVVLILFYNSLQ*

Homology

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BLAST of Chy2G022700 vs. ExPASy Swiss-Prot
Match: E5KCJ8 (Ycf3-interacting protein 1, chloroplastic OS=Nicotiana tabacum OX=4097 PE=1 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 3.9e-70
Identity = 135/182 (74.18%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 74  DEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDEDDAPT 133
           D+ PD QSLEY+ QI+RVLELLK+NRDMLF EVKLT+MIEDPR+VERRRLLGID+++APT
Sbjct: 82  DDDPDPQSLEYVSQIKRVLELLKRNRDMLFGEVKLTIMIEDPRDVERRRLLGIDDENAPT 141

Query: 134 RDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKK-KRSKSLYAKATDTGVN 193
           RDDLAA LEE+N GK PK+  ALQMLAEEM +WPNLE E+ K+ K  +SLYAKATDTG++
Sbjct: 142 RDDLAAALEEINEGKVPKDFAALQMLAEEMNSWPNLEVEATKQNKPGRSLYAKATDTGID 201

Query: 194 PREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVIIGISVVLILFYNS 253
           P+EAAKRL IDWD+AAEI+++  SD+P+VP A+GYGALY+V+AFP+IIGISVVLILFYNS
Sbjct: 202 PKEAAKRLKIDWDSAAEIDESAESDEPDVPPALGYGALYLVSAFPIIIGISVVLILFYNS 261

Query: 254 LQ 255
           LQ
Sbjct: 262 LQ 263

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BLAST of Chy2G022700 vs. ExPASy Swiss-Prot
Match: B8AAV3 (Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=CEST PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.2e-64
Identity = 144/248 (58.06%), Postives = 180/248 (72.58%), Query Frame = 0


Query: 34  LPLPSHGTRPHLPVPSSRNRRSLACVGKE-----DTQL-------RQPSSTTD------- 93
           LPLPS          S R RR  A +G++     DT +        +P +++D       
Sbjct: 45  LPLPSTANARAYSRSSRRRRRVAASLGQDEPGVSDTAVAPEGEGDSEPPASSDGAAGDIA 104

Query: 94  ---EQPDA--QSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDED 153
              EQP+A  + LE IRQ++RVLELL+KNRDM F EVKLT+MIEDPR++ER+RLLGI++ 
Sbjct: 105 SSAEQPEASPEDLEDIRQVKRVLELLQKNRDMTFGEVKLTIMIEDPRDIERKRLLGIEDP 164

Query: 154 DAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKR--SKSLYAKAT 213
           D  TRDDLA  L EVN G+ P+NRVALQ+LA+EMT WP+LE E+PKKK    KS+YAKAT
Sbjct: 165 DEITRDDLADALVEVNEGRIPENRVALQLLAKEMTEWPDLEMEAPKKKSKPGKSVYAKAT 224

Query: 214 DTGVNPREAAKRLNIDWDTAAEIEDADFSDD-PEVPAAVGYGALYIVTAFPVIIGISVVL 255
           DTG++P  AAKRLNIDWD+AA+++D +  DD  EVP+AVGY ALY++TAFPVIIGISVVL
Sbjct: 225 DTGIDPETAAKRLNIDWDSAADLDDEEEEDDETEVPSAVGYSALYLLTAFPVIIGISVVL 284

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BLAST of Chy2G022700 vs. ExPASy Swiss-Prot
Match: Q5VQK9 (Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CEST PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.2e-64
Identity = 144/248 (58.06%), Postives = 180/248 (72.58%), Query Frame = 0


Query: 34  LPLPSHGTRPHLPVPSSRNRRSLACVGKE-----DTQL-------RQPSSTTD------- 93
           LPLPS          S R RR  A +G++     DT +        +P +++D       
Sbjct: 45  LPLPSTANARAYSRSSRRRRRVAASLGQDEPGVSDTAVAPEGEGDSEPPASSDGAAGDIA 104

Query: 94  ---EQPDA--QSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVERRRLLGIDED 153
              EQP+A  + LE IRQ++RVLELL+KNRDM F EVKLT+MIEDPR++ER+RLLGI++ 
Sbjct: 105 ASAEQPEASPEDLEDIRQVKRVLELLQKNRDMTFGEVKLTIMIEDPRDIERKRLLGIEDP 164

Query: 154 DAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKR--SKSLYAKAT 213
           D  TRDDLA  L EVN G+ P+NRVALQ+LA+EMT WP+LE E+PKKK    KS+YAKAT
Sbjct: 165 DEITRDDLADALVEVNEGRIPENRVALQLLAKEMTEWPDLEMEAPKKKSKPGKSVYAKAT 224

Query: 214 DTGVNPREAAKRLNIDWDTAAEIEDADFSDD-PEVPAAVGYGALYIVTAFPVIIGISVVL 255
           DTG++P  AAKRLNIDWD+AA+++D +  DD  EVP+AVGY ALY++TAFPVIIGISVVL
Sbjct: 225 DTGIDPETAAKRLNIDWDSAADLDDEEEEDDETEVPSAVGYSALYLLTAFPVIIGISVVL 284

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BLAST of Chy2G022700 vs. ExPASy Swiss-Prot
Match: Q9LU01 (Ycf3-interacting protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Y3IP1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.3e-60
Identity = 123/215 (57.21%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 41  TRPHLPVPSSRNRRSLACVGKEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRD 100
           T   +PVP +  ++      ++D    +     +   D + L+Y+ +I+RV+ELL++NRD
Sbjct: 70  TEIRVPVPLTLEQQEKEKQNRDD----EEDEIDEGDVDPEDLKYVNEIKRVIELLRRNRD 129

Query: 101 MLFNEVKLTVMIEDPREVERRRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLA 160
           M+F+EVKLT+MIEDPRE+ERRRLLGI++ D P+RDDLA  LE+VN GK PK+R  L+ML 
Sbjct: 130 MIFSEVKLTIMIEDPRELERRRLLGIEDADTPSRDDLAEALEQVNDGKIPKDRATLRMLH 189

Query: 161 EEMTNWPNLEAESPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPE 220
           EEM  WPNLE E  KK+R KS+YAK+TDTG++P+EAAKRLN++WD+AA IE+ D  D+  
Sbjct: 190 EEMIRWPNLEVEVSKKQRGKSMYAKSTDTGIDPKEAAKRLNVEWDSAAAIEEVDVDDEQG 249

Query: 221 VPAAV-GYGALYIVTAFPVIIGISVVLILFYNSLQ 255
           V   V GYGALY V+A PVIIGISVVLILFYNSLQ
Sbjct: 250 VVTKVAGYGALYFVSALPVIIGISVVLILFYNSLQ 280

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BLAST of Chy2G022700 vs. ExPASy TrEMBL
Match: A0A0A0KJ48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538770 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.8e-130
Identity = 245/254 (96.46%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           MAVMALQ  HFP STSPSSSIEHNYDISRRFR+LPLPSHGTRPHLPVPSSRNRRSLACVG
Sbjct: 1   MAVMALQLRHFPLSTSPSSSIEHNYDISRRFRYLPLPSHGTRPHLPVPSSRNRRSLACVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQLRQPSSTTDEQP+AQ LEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQLRQPSSTTDEQPEAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGIDEDDAPTRDDLAATLEEVN GKFPKNRVALQMLAEEMTNWPNLEAE+PKKKRSK
Sbjct: 121 RRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTNWPNLEAEAPKKKRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDAD SDDPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 255
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 254

[Close]

BLAST of Chy2G022700 vs. ExPASy TrEMBL
Match: A0A1S3AYB4 (ycf3-interacting protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484231 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 6.2e-119
Identity = 229/254 (90.16%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           MAVMALQ  HF  S SPSSSIEHNY++ RRFR LPLPSHG    L VPSSRNRRSLACVG
Sbjct: 1   MAVMALQLRHFSLSPSPSSSIEHNYEVYRRFRQLPLPSHGPHHRLLVPSSRNRRSLACVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQ RQ SSTTDEQPDAQ+LEYI QI+RVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQFRQSSSTTDEQPDAQALEYIHQIRRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGIDEDDAPTRDDLAATLEEVN GKFPKNRVALQMLAEEMT WPNLEAE+PKK+RSK
Sbjct: 121 RRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTKWPNLEAEAPKKRRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDAD  DDPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLGDDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 255
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 254

[Close]

BLAST of Chy2G022700 vs. ExPASy TrEMBL
Match: A0A5A7UFW0 (Ycf3-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00060 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.8e-114
Identity = 219/243 (90.12%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           MAVMALQ  HF  S SPSSSIEHNY++ RRFR LPLPSHG    L VPSSRNRRSLACVG
Sbjct: 1   MAVMALQLRHFSLSPSPSSSIEHNYEVYRRFRQLPLPSHGPHHRLLVPSSRNRRSLACVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQLRQ SSTTDEQPDAQ+LEYI QI+RVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQLRQSSSTTDEQPDAQALEYIHQIRRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGIDEDDAPTRDDLAATLEEVN GKFPKNRVALQMLAEEMT WPNLEAE+PKK+RSK
Sbjct: 121 RRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTKWPNLEAEAPKKRRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDAD  DDPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLGDDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GIS 244
           GIS
Sbjct: 241 GIS 243

[Close]

BLAST of Chy2G022700 vs. ExPASy TrEMBL
Match: A0A6J1EC41 (ycf3-interacting protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432979 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.9e-112
Identity = 218/254 (85.83%), Postives = 229/254 (90.16%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           M VMALQ  HFP S SP SSI+HNY  SR FRHLPLP++ +R HLPV SSRNRR + CVG
Sbjct: 1   MEVMALQLRHFPLSPSP-SSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KE+TQL Q SST DEQPDAQ LEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGID++DAPTRDDLA TLEEVN GKFPKNR ALQMLAEEMTNWPNLE E+PKKKRSK
Sbjct: 121 RRLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYA  TDTGVNPREAAKRLNIDWDTAAE+EDAD S+DPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 255
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 253

[Close]

BLAST of Chy2G022700 vs. ExPASy TrEMBL
Match: A0A6J1IQU0 (ycf3-interacting protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111477600 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111
Identity = 218/254 (85.83%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           M VMALQ  HFP S SP SSI+HNY  SR FRHLPLP++ +R HLPV SSRNR  + CVG
Sbjct: 1   MEVMALQLRHFPLSPSP-SSIKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQL Q SST  EQPDAQ LEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGID+DDAPTRDDLA TLEEVN GKFPKNR ALQMLAEEMTNWPNLE E+PKKKRSK
Sbjct: 121 RRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYA  TDTGVNPREAAKRLNIDWDTAAE+EDAD S+DPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 255
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 253

[Close]

BLAST of Chy2G022700 vs. NCBI nr
Match: XP_004134512.1 (ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis sativus] >KGN49548.1 hypothetical protein Csa_003068 [Cucumis sativus])

HSP 1 Score: 475 bits (1222), Expect = 2.25e-168
Identity = 245/254 (96.46%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           MAVMALQ  HFP STSPSSSIEHNYDISRRFR+LPLPSHGTRPHLPVPSSRNRRSLACVG
Sbjct: 1   MAVMALQLRHFPLSTSPSSSIEHNYDISRRFRYLPLPSHGTRPHLPVPSSRNRRSLACVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQLRQPSSTTDEQP+AQ LEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQLRQPSSTTDEQPEAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGIDEDDAPTRDDLAATLEEVN GKFPKNRVALQMLAEEMTNWPNLEAE+PKKKRSK
Sbjct: 121 RRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTNWPNLEAEAPKKKRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDAD SDDPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 254
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 254

[Close]

BLAST of Chy2G022700 vs. NCBI nr
Match: XP_008439415.1 (PREDICTED: ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 439 bits (1128), Expect = 4.76e-154
Identity = 229/254 (90.16%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           MAVMALQ  HF  S SPSSSIEHNY++ RRFR LPLPSHG    L VPSSRNRRSLACVG
Sbjct: 1   MAVMALQLRHFSLSPSPSSSIEHNYEVYRRFRQLPLPSHGPHHRLLVPSSRNRRSLACVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQ RQ SSTTDEQPDAQ+LEYI QI+RVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQFRQSSSTTDEQPDAQALEYIHQIRRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGIDEDDAPTRDDLAATLEEVN GKFPKNRVALQMLAEEMT WPNLEAE+PKK+RSK
Sbjct: 121 RRLLGIDEDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTKWPNLEAEAPKKRRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDAD  DDPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLGDDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 254
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 254

[Close]

BLAST of Chy2G022700 vs. NCBI nr
Match: XP_038877519.1 (ycf3-interacting protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 436 bits (1121), Expect = 5.35e-153
Identity = 228/254 (89.76%), Postives = 237/254 (93.31%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           M VMALQ  HFP S S SSSIEHNY    RFRHLPLPS+ +R HLPVP+SRNR+SLACVG
Sbjct: 1   MQVMALQLRHFPLSPS-SSSIEHNYKAFPRFRHLPLPSYASRHHLPVPNSRNRQSLACVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQLRQ SST DEQPDAQ+LEY+RQIQRVLELLKKNRDMLFNEVKLTVMIEDPR+VER
Sbjct: 61  KEDTQLRQSSSTQDEQPDAQALEYVRQIQRVLELLKKNRDMLFNEVKLTVMIEDPRDVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGID+DDAPTRDDLAATLEEVN GKFPKNRVALQMLAEEMTNWPNLEAE+PKKKR K
Sbjct: 121 RRLLGIDDDDAPTRDDLAATLEEVNEGKFPKNRVALQMLAEEMTNWPNLEAEAPKKKRGK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDAD SDDPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADLSDDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 254
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 253

[Close]

BLAST of Chy2G022700 vs. NCBI nr
Match: XP_022925592.1 (ycf3-interacting protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 417 bits (1072), Expect = 1.56e-145
Identity = 218/254 (85.83%), Postives = 229/254 (90.16%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           M VMALQ  HFP S SPSS I+HNY  SR FRHLPLP++ +R HLPV SSRNRR + CVG
Sbjct: 1   MEVMALQLRHFPLSPSPSS-IKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRRVVGCVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KE+TQL Q SST DEQPDAQ LEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KENTQLSQSSSTEDEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGID++DAPTRDDLA TLEEVN GKFPKNR ALQMLAEEMTNWPNLE E+PKKKRSK
Sbjct: 121 RRLLGIDDEDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYA  TDTGVNPREAAKRLNIDWDTAAE+EDAD S+DPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 254
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 253

[Close]

BLAST of Chy2G022700 vs. NCBI nr
Match: XP_022977224.1 (ycf3-interacting protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 414 bits (1065), Expect = 1.82e-144
Identity = 218/254 (85.83%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 1   MAVMALQHLHFPFSTSPSSSIEHNYDISRRFRHLPLPSHGTRPHLPVPSSRNRRSLACVG 60
           M VMALQ  HFP S SPSS I+HNY  SR FRHLPLP++ +R HLPV SSRNR  + CVG
Sbjct: 1   MEVMALQLRHFPLSPSPSS-IKHNYKASRCFRHLPLPNYASRHHLPVSSSRNRWVVGCVG 60

Query: 61  KEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120
           KEDTQL Q SST  EQPDAQ LEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER
Sbjct: 61  KEDTQLSQSSSTEAEQPDAQDLEYIRQIQRVLELLKKNRDMLFNEVKLTVMIEDPREVER 120

Query: 121 RRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLAEEMTNWPNLEAESPKKKRSK 180
           RRLLGID+DDAPTRDDLA TLEEVN GKFPKNR ALQMLAEEMTNWPNLE E+PKKKRSK
Sbjct: 121 RRLLGIDDDDAPTRDDLAITLEEVNEGKFPKNRAALQMLAEEMTNWPNLEVEAPKKKRSK 180

Query: 181 SLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPEVPAAVGYGALYIVTAFPVII 240
           SLYA  TDTGVNPREAAKRLNIDWDTAAE+EDAD S+DPEVPAAVGYGALYIVTAFPVII
Sbjct: 181 SLYANVTDTGVNPREAAKRLNIDWDTAAELEDADLSEDPEVPAAVGYGALYIVTAFPVII 240

Query: 241 GISVVLILFYNSLQ 254
           GISVVLILFYNSLQ
Sbjct: 241 GISVVLILFYNSLQ 253

[Close]

BLAST of Chy2G022700 vs. TAIR 10
Match: AT5G44650.1 (Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage. )

HSP 1 Score: 234.6 bits (597), Expect = 9.0e-62
Identity = 123/215 (57.21%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 41  TRPHLPVPSSRNRRSLACVGKEDTQLRQPSSTTDEQPDAQSLEYIRQIQRVLELLKKNRD 100
           T   +PVP +  ++      ++D    +     +   D + L+Y+ +I+RV+ELL++NRD
Sbjct: 70  TEIRVPVPLTLEQQEKEKQNRDD----EEDEIDEGDVDPEDLKYVNEIKRVIELLRRNRD 129

Query: 101 MLFNEVKLTVMIEDPREVERRRLLGIDEDDAPTRDDLAATLEEVNAGKFPKNRVALQMLA 160
           M+F+EVKLT+MIEDPRE+ERRRLLGI++ D P+RDDLA  LE+VN GK PK+R  L+ML 
Sbjct: 130 MIFSEVKLTIMIEDPRELERRRLLGIEDADTPSRDDLAEALEQVNDGKIPKDRATLRMLH 189

Query: 161 EEMTNWPNLEAESPKKKRSKSLYAKATDTGVNPREAAKRLNIDWDTAAEIEDADFSDDPE 220
           EEM  WPNLE E  KK+R KS+YAK+TDTG++P+EAAKRLN++WD+AA IE+ D  D+  
Sbjct: 190 EEMIRWPNLEVEVSKKQRGKSMYAKSTDTGIDPKEAAKRLNVEWDSAAAIEEVDVDDEQG 249

Query: 221 VPAAV-GYGALYIVTAFPVIIGISVVLILFYNSLQ 255
           V   V GYGALY V+A PVIIGISVVLILFYNSLQ
Sbjct: 250 VVTKVAGYGALYFVSALPVIIGISVVLILFYNSLQ 280

The following BLAST results are available for this feature:

BLAST of Chy2G022700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E5KCJ8	3.9e-70	74.18	Ycf3-interacting protein 1, chloroplastic OS=Nicotiana tabacum OX=4097 PE=1 SV=2	[more]
B8AAV3	7.2e-64	58.06	Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa su...	[more]
Q5VQK9	7.2e-64	58.06	Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic OS=Oryza sativa su...	[more]
Q9LU01	1.3e-60	57.21	Ycf3-interacting protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Y3I...	[more]

BLAST of Chy2G022700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ48	7.8e-130	96.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538770 PE=4 SV=1	[more]
A0A1S3AYB4	6.2e-119	90.16	ycf3-interacting protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7UFW0	7.8e-114	90.12	Ycf3-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A6J1EC41	1.9e-112	85.83	ycf3-interacting protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1IQU0	1.3e-111	85.83	ycf3-interacting protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Chy2G022700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134512.1	2.25e-168	96.46	ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis sativus] >KGN49548...	[more]
XP_008439415.1	4.76e-154	90.16	PREDICTED: ycf3-interacting protein 1, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_038877519.1	5.35e-153	89.76	ycf3-interacting protein 1, chloroplastic [Benincasa hispida]	[more]
XP_022925592.1	1.56e-145	85.83	ycf3-interacting protein 1, chloroplastic [Cucurbita moschata]	[more]
XP_022977224.1	1.82e-144	85.83	ycf3-interacting protein 1, chloroplastic [Cucurbita maxima]	[more]

BLAST of Chy2G022700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44650.1	9.0e-62	57.21	Encodes a chloroplast protein that induces tolerance to multiple environmental s...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	PANTHER	PTHR33672:SF3	YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC	coord: 48..254
IPR040340	Chloroplast enhancing stress tolerance protein	PANTHER	PTHR33672	YCF3-INTERACTING PROTEIN 1, CHLOROPLASTIC	coord: 48..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy2G022700.1	Chy2G022700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
biological_process	GO:0080183	response to photooxidative stress
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane