Chy1G022200 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G022200
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH01: 26658194 .. 26658969 (+)
RNA-Seq Expression	Chy1G022200
Synteny	Chy1G022200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAACTGCCTTCCCTTCAATTCCCTTGAGGATGTTTTGCATTGGCCCCAGAGGTACACCAATAGCTCTGTAATAAACAATGACTTTCGGTTATTTAATCTGCACATCTAATCTCAAACCTTGATTAATTTAATTAATCTTCTTTTCTATAGAAATGGTCAAAGTTGAATTTCCAGACTTCCAAGTTCACCTGGTTGCAGCTAGAAAGATAAGGTAACAATCATTTTGGTAAAGATAAGAGTAAACTTGTCACATCATTTCACCAGACAATGGTGAAACAGAGATGAGATCATTAGAACAAACCAATGAGCTTAGCAAATCCAAGGCTTCTTTACAAAGAAACAGTATATTTTGAATGTTCAAAGTCAAAGTGCCTATACAACACGTATTTGTGCAACATCTGTTACTTGTCCTAGTTGCCATCTCTGCCATATAAATATGACCCAAAGCCGGACTGTCTCTCTACGATTGTGCCAAATCCTTGGCTGCTAGACGGGCAGCCAAGAAAAAAAAAGAAGACAATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAAGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGATCGCTTTGGAAGCCGGCGTCGCTAA

mRNA sequence

ATGACTAACTGCCTTCCCTTCAATTCCCTTGAGGATGTTTTGCATTGGCCCCAGAGGTACACCAATAGCTCTTTGCCATCTCTGCCATATAAATATGACCCAAAGCCGGACTGTCTCTCTACGATTGTGCCAAATCCTTGGCTGCTAGACGGGCAGCCAAGAAAAAAAAAGAAGACAATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAAGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGATCGCTTTGGAAGCCGGCGTCGCTAA

Coding sequence (CDS)

ATGACTAACTGCCTTCCCTTCAATTCCCTTGAGGATGTTTTGCATTGGCCCCAGAGGTACACCAATAGCTCTTTGCCATCTCTGCCATATAAATATGACCCAAAGCCGGACTGTCTCTCTACGATTGTGCCAAATCCTTGGCTGCTAGACGGGCAGCCAAGAAAAAAAAAGAAGACAATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAAGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGATCGCTTTGGAAGCCGGCGTCGCTAA

Protein sequence

MTNCLPFNSLEDVLHWPQRYTNSSLPSLPYKYDPKPDCLSTIVPNPWLLDGQPRKKKKTMSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGIKKWAKAVVAYARTVSDRFGSRRR*

Homology

[Close]

BLAST of Chy1G022200 vs. ExPASy TrEMBL
Match: A0A0A0KB03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 60  MSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 119
           MSVKKSLSLTKAEEAKRLT+HEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI
Sbjct: 1   MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 120 KKWAKAVVAYARTVSDRFGSRRR 143
           KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61  KKWAKAVVAYARTVSDRFGSRRR 83

[Close]

BLAST of Chy1G022200 vs. ExPASy TrEMBL
Match: A0A5A7UXU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00720 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.4e-35
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 60  MSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 119
           MSVKKSLSLTKAEEAKRLT+HEAARKRRRSFDLCFSYPE+PMERGKSLKEMNSEKLKTGI
Sbjct: 1   MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 120 KKWAKAVVAYARTVSDRFGSRRR 143
           KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61  KKWAKAVVAYARTVSDRFGSRRR 83

[Close]

BLAST of Chy1G022200 vs. ExPASy TrEMBL
Match: A0A498IZM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.0e-14
Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 51  GQPRKKKKTMSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEM 110
           G  ++   T   +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM
Sbjct: 13  GAGKEGAVTKKTRKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEM 72

Query: 111 NSEKLKTGIKKWAKAVVAYARTVSDRFGSRR 142
           +SEKLK+GIK+WAKAVVAYAR VSDRFGS R
Sbjct: 73  DSEKLKSGIKRWAKAVVAYARQVSDRFGSSR 101

[Close]

BLAST of Chy1G022200 vs. ExPASy TrEMBL
Match: A0A540KWP0 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_036021 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.0e-14
Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 51  GQPRKKKKTMSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEM 110
           G  ++   T   +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM
Sbjct: 13  GAGKEGAVTKKTRKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEM 72

Query: 111 NSEKLKTGIKKWAKAVVAYARTVSDRFGSRR 142
           +SEKLK+GIK+WAKAVVAYAR VSDRFGS R
Sbjct: 73  DSEKLKSGIKRWAKAVVAYARQVSDRFGSSR 101

[Close]

BLAST of Chy1G022200 vs. ExPASy TrEMBL
Match: A0A2P5FE88 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.8e-14
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 60  MSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 119
           MSVKK+LSL + E AK    H+ +  RR  +  CFS+ E+PMERGK+LKEM+S KLK  I
Sbjct: 1   MSVKKTLSLNRGEAAK---GHQIS-VRRGKYGRCFSFVELPMERGKTLKEMDSNKLKFEI 60

Query: 120 KKWAKAVVAYARTVSDRFGSRR 142
           K+WAKAVVAYAR VS RFG  R
Sbjct: 61  KRWAKAVVAYARQVSGRFGGTR 78

[Close]

BLAST of Chy1G022200 vs. NCBI nr
Match: KGN45542.1 (hypothetical protein Csa_016865 [Cucumis sativus])

HSP 1 Score: 154 bits (390), Expect = 4.66e-46
Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 60  MSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 119
           MSVKKSLSLTKAEEAKRLT+HEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI
Sbjct: 1   MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 60

Query: 120 KKWAKAVVAYARTVSDRFGSRRR 142
           KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61  KKWAKAVVAYARTVSDRFGSRRR 83

[Close]

BLAST of Chy1G022200 vs. NCBI nr
Match: KAA0059447.1 (hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK03877.1 hypothetical protein E5676_scaffold347G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 154 bits (388), Expect = 9.40e-46
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 60  MSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 119
           MSVKKSLSLTKAEEAKRLT+HEAARKRRRSFDLCFSYPE+PMERGKSLKEMNSEKLKTGI
Sbjct: 1   MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPELPMERGKSLKEMNSEKLKTGI 60

Query: 120 KKWAKAVVAYARTVSDRFGSRRR 142
           KKWAKAVVAYARTVSDRFGSRRR
Sbjct: 61  KKWAKAVVAYARTVSDRFGSRRR 83

[Close]

BLAST of Chy1G022200 vs. NCBI nr
Match: KAG6593505.1 (hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129 bits (324), Expect = 5.16e-36
Identity = 69/83 (83.13%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 60  MSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 119
           MSVKKSLSLTKAEEAKR  +H+AARKRRRSFDLCFS P++ MERGKSLKEM+SEKLK+GI
Sbjct: 1   MSVKKSLSLTKAEEAKRSARHDAARKRRRSFDLCFSSPKLQMERGKSLKEMDSEKLKSGI 60

Query: 120 KKWAKAVVAYARTVSDRFGSRRR 142
           +KWAK+VVAYAR VSDRFGS RR
Sbjct: 61  RKWAKSVVAYARQVSDRFGSWRR 83

[Close]

BLAST of Chy1G022200 vs. NCBI nr
Match: KAG6575488.1 (hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128 bits (321), Expect = 1.47e-35
Identity = 69/82 (84.15%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 60  MSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGI 119
           MSVKKS SLTKAEEAKR  +H+AARKRRRSFDLCFS PE+PME GKSLKEM+SEKLK  I
Sbjct: 1   MSVKKSFSLTKAEEAKRPGRHDAARKRRRSFDLCFSSPELPMEYGKSLKEMDSEKLKDAI 60

Query: 120 KKWAKAVVAYARTVSDRFGSRR 141
           +KWAKAVVAYARTVS+RFGSRR
Sbjct: 61  RKWAKAVVAYARTVSNRFGSRR 82

[Close]

BLAST of Chy1G022200 vs. NCBI nr
Match: XP_028964144.1 (uncharacterized protein LOC114827006 [Malus domestica] >RXH88728.1 hypothetical protein DVH24_000327 [Malus domestica] >TQD78432.1 hypothetical protein C1H46_036021 [Malus baccata])

HSP 1 Score: 84.7 bits (208), Expect = 4.31e-18
Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 0


Query: 59  TMSVKKSLSLTKAEEAKRLTKHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTG 118
           T   +K+LSL   E  K      AA++ R  FD CFS+ E+  E GKSLKEM+SEKLK+G
Sbjct: 21  TKKTRKTLSLNNGEAGKSSGDVVAAKRTR--FDRCFSFMEVSTEPGKSLKEMDSEKLKSG 80

Query: 119 IKKWAKAVVAYARTVSDRFGSRR 141
           IK+WAKAVVAYAR VSDRFGS R
Sbjct: 81  IKRWAKAVVAYARQVSDRFGSSR 101

The following BLAST results are available for this feature:

BLAST of Chy1G022200 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G022200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB03	1.4e-35	98.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1	[more]
A0A5A7UXU0	2.4e-35	97.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A498IZM5	3.0e-14	56.04	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1	[more]
A0A540KWP0	3.0e-14	56.04	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_036021 PE=4 SV=1	[more]
A0A2P5FE88	6.8e-14	60.98	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV...	[more]

BLAST of Chy1G022200 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45542.1	4.66e-46	98.80	hypothetical protein Csa_016865 [Cucumis sativus]	[more]
KAA0059447.1	9.40e-46	97.59	hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK038...	[more]
KAG6593505.1	5.16e-36	83.13	hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6575488.1	1.47e-35	84.15	hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_028964144.1	4.31e-18	60.24	uncharacterized protein LOC114827006 [Malus domestica] >RXH88728.1 hypothetical ...	[more]

BLAST of Chy1G022200 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36484	OS01G0558700 PROTEIN	coord: 60..142
None	No IPR available	PANTHER	PTHR36484:SF2	OS01G0558700 PROTEIN	coord: 60..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G022200.1	Chy1G022200.1	mRNA