Chy1G021170 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGAGTGCAGCGGTGCCCTTTTGGAGAGCGGCGGGGATGACTTACATCACATACTCAAACATTTGTGCCAATCTGGTCAGGAACTGTCTCAAGGAGCCTTACAAGACCGAGGTTCTCAGACGTGAGAAGGTTCATTTTTCCGTTGCCAAGTGGGTGGATGGCAAGCCCCAAAAGCCCAGTATGCTCTCTCTCTCTCTCTTTTCCTCTTATTTTGATTTTAGATCGAGATCTAGGGTTTTCTAGCTCTTGGTTGATATCCTGTTTTGGTTTCTGATTTGTTTTCAATACATTTACCTCTTATTTATTGGATTTTTTATTTTCTGGGGTTGATTATTATGGTAGATTTTTGAAGATTTAGGGTAAATTTCAGTTCTCTTTGAGGTGATATGAGGATCACACATTTCGTAGGGATACAATTCGAATCGTGGTTTTCTAGGGTTTCTAGTTTGTTTTCACCTATATGCGTATTTTTTGTGTCAGGCTTAGTAATTCGTCGCTTCCATGCGTGCAAGTCATTTGTGTGGGTTGGGTATTTGTTCCCTTGAGTCGTAGTGGAGCGTCTCTTTTCTCGATACATTTCATTTTCATTGTTTGTAGGAAGCATTTACTTATAATTAATGTAGTTCCAAACCTGTTTAGAATTTATTATTCAATTGAATAACTTGATATCTATATGACTTACTTCCTCTGCCAATGGGGTTTAGAATTTAGCTTGGAGGTCTTTGCGGAAAAATTTTAGGGGCGGTAATTCTTCACATAAGCATTTTGTAGCGGGTATTGAAAATCCTTAAAACCAATTGATTAGACTATAACATACCAAAACGGATATTGGTCGGCACAAAGAAGCTGTTGGTTATCAGTTTTGAGGGATCAAGGATCGACCATCGTATGCCAGTGGCCCAACTCTAGCCAAATTAGAGATTAGACATATAAAAACTTAATCCCACCCTCATCTGCCAATGGCCAGACCCTGACCAAATTAGATATTGGTTGGCACAAAGAAGCTGTTAGTTATCAGTCTTGAGGGATCAAGGAACAACCGTCATTTGCCAGTGGCCCTTTCCCTGACCAAATTAGAGATTAGACATCAAAAACCTTATTTCGGCCTACTTTGATCAAAGGTTGGCAGCCTCATCATTTCTACTTCTTCTTCTCTTGGGTGAGATTCATTCACGTGTTAGCTTATTTTGTTTTTAAGGTATGCAAATTTTGTCTCAATTCCTAAAGTATAGGTACTATATACTATGTTTCAATCTTGAGTGTAGAATCCACGATGGTCTTCTAGTATAGGGCACAGGCTATTTCTTCTTCAATTTTTATATGATTTAGTGTAAACTCTCAAATGTCTGGGATATACATTTGCATTGTTGCTCGTGAAAGTTTTATATACTCTTTGTCTGTTGATTACAGATGTGTTTGTACGGTAGGTGTTTTTTTATTAATATATGTGTGTACGTGTTTGATAGACATAGGAAAAAGGAAATGTTTGTGGTGGTAAGATAACCACTGTGTACAGTGTGAGTGAAGTCAATACTCCACTGTATCCCACCACAAAAATTACTGTCCAATTTTTTCACAATGGGGCCGACATGTATTGACTTGGATGGGTAAAAAAACTCACTCACCGTTTGGGCGCACCAACAATTGAAGAGGTTTATGCCTCGTTATTCGTGTCAATTCCCCGAATTACTCTCTCCTATAATTATTACTCCAACTCAATCCCACTAAATAGTTTCTATGCACATTGGACTCCATCCTGACATTTGCAATTTCAAAGGGAACTCTCTTAATTGCACAATTTTGGTTTGTTTATGTTCGTTACCTCTCAATTTTTTTCTAATGGTTTTCACTCCTAGCTAAATTCTAACAAAAAAAACATACTTTCAGTTTTCAAAACTTGATTTACTTTTTAAAAACATCAGTAAAAGTAGACAATAAAACATAGAAGCTTAAACGTATGAAAGTGTTTAGATGTCTAAGTTTGCTCGACTTTGTGAACAAAGTCTCTAAAGTTTGAGTATAGTTTAAAAACAAGATGCTGTGTTTAATAAGTTTGAATTTTAGGAAATTGGTGGTGATCTATTTGACACAAAATTAAAAGTTCAGATACCATCTTTCAGTATTTAGTATAAACATATATACCTATATACCATTGTGTATTTACTGATAACTTTATCTTTGTTACATCAGCTCTTAGGTCGGACACTCCTGAAGCGTGA ATGGCGTCGAGTGCAGCGGTGCCCTTTTGGAGAGCGGCGGGGATGACTTACATCACATACTCAAACATTTGTGCCAATCTGGTCAGGAACTGTCTCAAGGAGCCTTACAAGACCGAGGTTCTCAGACGTGAGAAGGTTCATTTTTCCGTTGCCAAGTGGGTGGATGGCAAGCCCCAAAAGCCCACTCTTAGGTCGGACACTCCTGAAGCGTGA ATGGCGTCGAGTGCAGCGGTGCCCTTTTGGAGAGCGGCGGGGATGACTTACATCACATACTCAAACATTTGTGCCAATCTGGTCAGGAACTGTCTCAAGGAGCCTTACAAGACCGAGGTTCTCAGACGTGAGAAGGTTCATTTTTCCGTTGCCAAGTGGGTGGATGGCAAGCCCCAAAAGCCCACTCTTAGGTCGGACACTCCTGAAGCGTGA MASSAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLRREKVHFSVAKWVDGKPQKPTLRSDTPEA* Homology
BLAST of Chy1G021170 vs. ExPASy Swiss-Prot
Match: Q96253 (ATP synthase subunit epsilon, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g51650 PE=1 SV=3) HSP 1 Score: 129.8 bits (325), Expect = 1.2e-29 Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy Swiss-Prot
Match: Q06450 (ATP synthase subunit epsilon, mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 4.6e-29 Identity = 57/69 (82.61%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy Swiss-Prot
Match: Q41898 (ATP synthase subunit epsilon, mitochondrial OS=Zea mays OX=4577 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 5.9e-24 Identity = 48/68 (70.59%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy Swiss-Prot
Match: Q75JK6 (ATP synthase subunit epsilon, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=atp5f1e PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07 Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy Swiss-Prot
Match: Q9VXN2 (Protein stunted OS=Drosophila melanogaster OX=7227 GN=sun PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07 Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy TrEMBL
Match: A0A0A0K7J6 (ATP synthase epsilon chain, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G447900 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy TrEMBL
Match: A0A1S3CGH8 (ATP synthase subunit epsilon, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103500632 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.2e-31 Identity = 65/70 (92.86%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy TrEMBL
Match: A0A6J1CZN8 (ATP synthase subunit epsilon, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016259 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.3e-30 Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy TrEMBL
Match: A0A2C9VXW8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G195000 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.3e-30 Identity = 65/70 (92.86%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Chy1G021170 vs. ExPASy TrEMBL
Match: B9RU09 (ATP synthase epsilon chain, mitochondrial, putative OS=Ricinus communis OX=3988 GN=RCOM_1460050 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 4.4e-30 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Chy1G021170 vs. NCBI nr
Match: XP_004141742.1 (ATP synthase subunit epsilon, mitochondrial [Cucumis sativus] >KGN45428.1 hypothetical protein Csa_016824 [Cucumis sativus]) HSP 1 Score: 146 bits (369), Expect = 2.83e-44 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of Chy1G021170 vs. NCBI nr
Match: XP_038896825.1 (ATP synthase subunit epsilon, mitochondrial [Benincasa hispida] >XP_038896976.1 ATP synthase subunit epsilon, mitochondrial [Benincasa hispida]) HSP 1 Score: 143 bits (360), Expect = 6.71e-43 Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Chy1G021170 vs. NCBI nr
Match: XP_008462225.1 (PREDICTED: ATP synthase subunit epsilon, mitochondrial [Cucumis melo]) HSP 1 Score: 142 bits (357), Expect = 1.93e-42 Identity = 65/70 (92.86%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of Chy1G021170 vs. NCBI nr
Match: XP_022147265.1 (ATP synthase subunit epsilon, mitochondrial [Momordica charantia]) HSP 1 Score: 139 bits (350), Expect = 2.25e-41 Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Chy1G021170 vs. NCBI nr
Match: OAY51188.1 (hypothetical protein MANES_05G195000v8 [Manihot esculenta]) HSP 1 Score: 139 bits (350), Expect = 2.25e-41 Identity = 65/70 (92.86%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Chy1G021170 vs. TAIR 10
Match: AT1G51650.1 (ATP synthase epsilon chain, mitochondrial ) HSP 1 Score: 129.8 bits (325), Expect = 8.7e-31 Identity = 58/69 (84.06%), Postives = 64/69 (92.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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