Chy1G021160 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G021160
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like
Location	chrH01: 25855132 .. 25856500 (+)
RNA-Seq Expression	Chy1G021160
Synteny	Chy1G021160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAGATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAACTACTGCTTATTAGTTTCTATCTTGAAATGAAACCATACTTGTTTCTGTATTTTCCTCATGGTCATAGAACAGCTATTCTTCAATCAATTTATCATAACTTGCTTGCTTATTGCTCGATGGCTTATTAGTTAGGCAGTTTCTTATCAATATGATTTTGAGTATTTTGTAATTTCTTAGTGCAGCCAGAAAATTGCGTGTCTTTTCTCCTAGTGCACTGTGCAGTGGTGATTTAAGACTCCCTGAGCCATGAACAAGAATGAAGGAAACTAGAAAAGAATAGAAGACAGCTTAATCTTGAACCAAGAAATAAGTAATATACTATCAAGTTTTAACAGTGTTGGTATCTTTTCAAGGGGTTGTTCTTTGATTGGAAAAAAATGCTTTTTTATATAGTATTCTCTTTATCGTTCATAAAGAGGAGGTTAGGGTGTAGTTTGTTGGATTGTTTGCCTAAAAAAAGGGTATATATCAGGCAAAAAAAGAAAAAAGTAGGTATATATAATGATTAAAGAAAAAAGTAGGTATATATAATGATTAAAGAAATGAAAAAGAATGATTAAAGAATCACATCCTTACCATTCTATTTGAAACTTGTGAGTCTAGTAGACTTTTACATGTCTTCTCCTTCACTTACTATCATAAAGATTGTTCTAAGATAAGACAGTTTTTGCAGATTTATAGTTGTTAGAATACCTTGAATGTGTTTGCTGGTGTTTTAGAATGATCCTACATGGGTTTTGCTAGGGTTAAAGGAGTGCACTTAGAATGATCCTACACGGGTTTTGCTAGGGTTAAAGGAGTGCACTATACATAAACTCTCTAGCTCTAGAGGCACCACTGGAATCTTAAGTTTAACATTTTCTCTTTAATAACAAAATTTGCTCATCCCCTGCCCATGCACGTAGCTAACTCATAGCTAACGCATTGTCTCTATTTTGATTCTCTACGGTTTTAGTTTTCTTTTCATATCAACAGTTATTATTACGAAAAATGACAGAACCGAAACAAAGTTCTGTTTAAATTCGACTAATTGATAGAATGAACTTTTGTTTCCAAGATTCTTAATTTGTAAAGTAATAATGTTCTTATAAATCAATATTTTGATGTCTGCTTGGTGGTTCATATTCTATTCAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCACCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

mRNA sequence

ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAGATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCACCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

Coding sequence (CDS)

ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAGATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAAGTGGCGTTGGACTCCATCTCATCCCTAATTACCACCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

Protein sequence

MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSSSTKLHSSL*

Homology

[Close]

BLAST of Chy1G021160 vs. ExPASy Swiss-Prot
Match: Q9C9K3 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA2 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-07
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALD---SISSLITTLSS 67
           D + +   +EDQDY+ KI KLQ YLD+V+ IV   CSQ+VL+ AL    S++ ++TT+SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  MSSS 69
            S+S
Sbjct: 609 SSTS 612

[Close]

BLAST of Chy1G021160 vs. ExPASy Swiss-Prot
Match: Q9SYP2 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-06
Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+   L+++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

[Close]

BLAST of Chy1G021160 vs. ExPASy Swiss-Prot
Match: Q41140 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis OX=3988 GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-06
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSS 67
           D + I   +EDQDY+ +I KLQ YLD+V+ IV   CSQEVL+ AL  ++S+   L +MSS
Sbjct: 549 DAKPITLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLLTMSS 608

Query: 68  ST 70
           ++
Sbjct: 609 TS 610

[Close]

BLAST of Chy1G021160 vs. ExPASy Swiss-Prot
Match: P21342 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum OX=4113 GN=PFP-ALPHA PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-06
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL +++S+   LS +SS
Sbjct: 549 DAKAVSLCVEDQDYIGRIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVTDILSVISS 608

Query: 68  STKL 72
            + +
Sbjct: 609 PSSV 612

[Close]

BLAST of Chy1G021160 vs. ExPASy TrEMBL
Match: A0A0A0KAL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447890 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.8e-27
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLE+ALDSISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 TLSSMSSSTKLHSSL 76
           LSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]

BLAST of Chy1G021160 vs. ExPASy TrEMBL
Match: A0A5A7UXI5 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00720 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-26
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVAL+SISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 TLSSMSSSTKLHSSL 76
           LSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]

BLAST of Chy1G021160 vs. ExPASy TrEMBL
Match: A0A1S4E4F9 (pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS=Cucumis melo OX=3656 GN=LOC103500631 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-26
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVAL+SISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 TLSSMSSSTKLHSSL 76
           LSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]

BLAST of Chy1G021160 vs. ExPASy TrEMBL
Match: A0A5J4ZCX1 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_018620 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.8e-08
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 13  GTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSSSTKLH 72
           G  L+D DY+ KI +LQ Y+D+VKKIV   CSQEVLEVAL S+SSL+ TLS +SS  K  
Sbjct: 101 GLCLQDHDYIGKIKELQVYVDKVKKIVKPGCSQEVLEVALSSMSSLVETLSVLSSRQKPQ 160

Query: 73  SSL 76
           SSL
Sbjct: 161 SSL 163

[Close]

BLAST of Chy1G021160 vs. ExPASy TrEMBL
Match: A0A5B7B4K3 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032996 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 13  GTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSSSTKLH 72
           G  L++ DY+ KI +LQ Y+D+VKKIV   CSQ VLEVAL S+SSL+  LS MSS  KL 
Sbjct: 130 GLCLQEHDYIGKIKELQVYIDKVKKIVKPGCSQVVLEVALSSMSSLVEVLSVMSSKQKLQ 189

Query: 73  SSL 76
           SSL
Sbjct: 190 SSL 192

[Close]

BLAST of Chy1G021160 vs. NCBI nr
Match: KGN45427.1 (hypothetical protein Csa_016056 [Cucumis sativus])

HSP 1 Score: 133 bits (335), Expect = 6.24e-39
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLE+ALDSISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 TLSSMSSSTKLHSSL 75
           LSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]

BLAST of Chy1G021160 vs. NCBI nr
Match: XP_016902860.1 (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis melo] >KAA0059347.1 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (324), Expect = 2.97e-37
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVAL+SISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 TLSSMSSSTKLHSSL 75
           LSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]

BLAST of Chy1G021160 vs. NCBI nr
Match: KAG7025939.1 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (261), Expect = 1.28e-27
Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0


Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
          MEA++ DD QIIG   EDQDYLEKITKLQGYLDEVKKIV ESCS+EVLEVAL S+SSLI+
Sbjct: 1  MEAEISDD-QIIGKAFEDQDYLEKITKLQGYLDEVKKIVRESCSEEVLEVALSSVSSLIS 60

Query: 61 TLSSMSSS---TKLHSSL 75
           LSSM+SS   TKLHSSL
Sbjct: 61 ILSSMASSSSFTKLHSSL 77

[Close]

BLAST of Chy1G021160 vs. NCBI nr
Match: KAG6593594.1 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.7 bits (226), Expect = 1.38e-19
Identity = 53/78 (67.95%), Postives = 62/78 (79.49%), Query Frame = 0


Query: 1   MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLIT 60
           +  ++L++       L +QDYLEKITKLQGYLDEVKKIV ESCS+EVLEVAL S+SSLI+
Sbjct: 344 LSVEILENFWCCLCSLSNQDYLEKITKLQGYLDEVKKIVRESCSEEVLEVALSSVSSLIS 403

Query: 61  TLSSM---SSSTKLHSSL 75
            LSSM   SSSTKLHSSL
Sbjct: 404 ILSSMASSSSSTKLHSSL 421

[Close]

BLAST of Chy1G021160 vs. NCBI nr
Match: KAG6647373.1 (hypothetical protein CIPAW_07G074600 [Carya illinoinensis])

HSP 1 Score: 67.4 bits (163), Expect = 1.36e-12
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 12 IGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSSSTKL 71
          +  + +D DY+EKI +LQGYLD VKKI    CS+EVL VAL S+SSL+  LSSMSS +K 
Sbjct: 23 MDVLTKDLDYMEKIKELQGYLDMVKKIAKPGCSEEVLNVALSSMSSLVNLLSSMSSRSKT 82

Query: 72 HSSL 75
           +SL
Sbjct: 83 LASL 86

[Close]

BLAST of Chy1G021160 vs. TAIR 10
Match: AT1G76550.1 (Phosphofructokinase family protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-08
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALD---SISSLITTLSS 67
           D + +   +EDQDY+ KI KLQ YLD+V+ IV   CSQ+VL+ AL    S++ ++TT+SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  MSSS 69
            S+S
Sbjct: 609 SSTS 612

[Close]

BLAST of Chy1G021160 vs. TAIR 10
Match: AT1G20950.1 (Phosphofructokinase family protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.9e-07
Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALDSISSLITTLSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+   L+++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

The following BLAST results are available for this feature:

BLAST of Chy1G021160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9K3	2.4e-07	48.44	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arab...	[more]
Q9SYP2	2.7e-06	44.26	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arab...	[more]
Q41140	2.7e-06	48.39	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinu...	[more]
P21342	2.7e-06	43.75	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanu...	[more]

BLAST of Chy1G021160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL4	2.8e-27	97.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447890 PE=4 SV=1	[more]
A0A5A7UXI5	5.3e-26	96.00	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS...	[more]
A0A1S4E4F9	5.3e-26	96.00	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS...	[more]
A0A5J4ZCX1	3.8e-08	61.90	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_018620 PE=4 SV=1	[more]
A0A5B7B4K3	1.1e-07	60.32	Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032996...	[more]

BLAST of Chy1G021160 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45427.1	6.24e-39	97.33	hypothetical protein Csa_016056 [Cucumis sativus]	[more]
XP_016902860.1	2.97e-37	96.00	PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alph...	[more]
KAG7025939.1	1.28e-27	78.21	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Cucurbit...	[more]
KAG6593594.1	1.38e-19	67.95	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, partial ...	[more]
KAG6647373.1	1.36e-12	57.81	hypothetical protein CIPAW_07G074600 [Carya illinoinensis]	[more]

BLAST of Chy1G021160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76550.1	1.7e-08	48.44	Phosphofructokinase family protein	[more]
AT1G20950.1	1.9e-07	44.26	Phosphofructokinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43650:SF14	PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE SUBUNIT ALPHA	coord: 10..73
None	No IPR available	PANTHER	PTHR43650	PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE	coord: 10..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G021160.1	Chy1G021160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0006096	glycolytic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009749	response to glucose
cellular_component	GO:0005829	cytosol
molecular_function	GO:0047334	diphosphate-fructose-6-phosphate 1-phosphotransferase activity