Chy1G020930 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G020930
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	dehydration-responsive element-binding protein 3-like
Location	chrH01: 25646299 .. 25646901 (+)
RNA-Seq Expression	Chy1G020930
Synteny	Chy1G020930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACCCCTCTTCCCACTACTCCGGCCGGCAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGTACTTTTCCAACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCTGACTTTTTGCCTAGACCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCTGCCGCCAAAGCTGCAGCGATGGTCCATTTGAACTCCGCTGCATTGCCGTCCGAGGAGGAGGATCTGAGTGAGATCGTCGAGTTGCCGAATATAGAAGTCGATTTTTGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCCTTGGCGGCGGAATTCGGTTCCGGTTATTTTTCCGGCCAAACGACGGCGGAGGAAATTTGTTACCCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

mRNA sequence

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACCCCTCTTCCCACTACTCCGGCCGGCAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGTACTTTTCCAACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCTGACTTTTTGCCTAGACCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCTGCCGCCAAAGCTGCAGCGATGGTCCATTTGAACTCCGCTGCATTGCCGTCCGAGGAGGAGGATCTGAGTGAGATCGTCGAGTTGCCGAATATAGAAGTCGATTTTTGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCCTTGGCGGCGGAATTCGGTTCCGGTTATTTTTCCGGCCAAACGACGGCGGAGGAAATTTGTTACCCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

Coding sequence (CDS)

ATGGCAAAACCAAAGAATTCAAATCCCCAGAACAAAACCACCCCTCTTCCCACTACTCCGGCCGGCAAAAGACCAAGAGACTGCAACAAACACCCTGTTTTCCGAGGCGTACGGAAGCGGAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCCCGTAAGAATTCCCGAATTTGGCTCGGTACTTTTCCAACTCCGGAGATGGCGGCACGTGCTCACGATGCCGCCGCTTTATGCATCAAAGGCGACTCTGCCATCCTCAATTACCCTGAACTTGCTGACTTTTTGCCTAGACCGGCGTCGCTCATGCCGCAGGATGTTCAGGCTGCTGCCGCCAAAGCTGCAGCGATGGTCCATTTGAACTCCGCTGCATTGCCGTCCGAGGAGGAGGATCTGAGTGAGATCGTCGAGTTGCCGAATATAGAAGTCGATTTTTGTACTGAGTCGTTGAACGAGTTCAAATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCCTTGGCGGCGGAATTCGGTTCCGGTTATTTTTCCGGCCAAACGACGGCGGAGGAAATTTGTTACCCGAGCAGTTTTTACGGCGTTCTTTGGGATTAA

Protein sequence

MAKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYFSGQTTAEEICYPSSFYGVLWD*

Homology

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BLAST of Chy1G020930 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.1e-38
Identity = 87/153 (56.86%), Postives = 102/153 (66.67%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 82
           KR RD  KHPV+RGVR R+WGKWVSEIR+PRK SRIWLGTFPTPEMAARAHD AAL IKG
Sbjct: 40  KRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 99

Query: 83  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHL--------NSAALPS------- 142
            +AILN+PELAD  PRP SL P+D+Q AA KAA M           +S++L S       
Sbjct: 100 TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESL 159

Query: 143 ---------EEEDLSEIVELPNIEVDFCTESLN 152
                    E E+L EIVELP++   +  +S N
Sbjct: 160 VLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

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BLAST of Chy1G020930 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-36
Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 23  KRP-RDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 82
           K+P +D  KHPV+RGVRKR+WGKWVSEIR+PRK SRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 83  GDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSE------------- 142
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S +  S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 143 ---------EEDLSEIVELPNI--EVDFCTESLNEFKLVTESWEWW 164
                     E+L EIVELP++    D  T+  NEF + ++S + W
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLW 188

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BLAST of Chy1G020930 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-35
Identity = 89/166 (53.61%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 32  PVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPE 91
           P +RGVR R+WGKWVSEIR+PRK SRIWLGTF TPEMAARAHDAAAL IKG SA+LN+PE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 92  LADFLPRPASLMPQDVQAAAAKAAAM-------------------------------VHL 151
           LA +LPRPAS  P+DVQAAAA AAAM                                  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 152 NSAALPSEE------EDLSEIVELPNIEVDFCTESLNEFKLVTESW 161
           +S+  PS E      E+LSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 161 SSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

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BLAST of Chy1G020930 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 86/168 (51.19%), Postives = 103/168 (61.31%), Query Frame = 0


Query: 2   AKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLG 61
           A P+N+N + +     +  +        +HPV+RGVR RSWGKWVSEIRQPRK +RIWLG
Sbjct: 33  APPRNNNTRKRRRDSSSASSS----SSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLG 92

Query: 62  TFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLN 121
           TF T +MAARAHD AAL IKG SA+LN+PELA   PRPAS  P D+Q AAA+AAAMV   
Sbjct: 93  TFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEE 152

Query: 122 S-------------------AALPSEEEDLSEIVELPNIEVDFCTESL 151
                               AA   +EE L +IVELPNIE     ES+
Sbjct: 153 KLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]

BLAST of Chy1G020930 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-33
Identity = 81/145 (55.86%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 82
           K  ++ NK PV+RGVR RSWGKWVSEIR+PRK SRIWLGTFPT EMA RAHD AA+ IKG
Sbjct: 8   KEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKG 67

Query: 83  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEE--------DLSE 142
            SAILN+PEL+  LPRP SL P+DV+AAA KAA M   ++ A  S+ E         +SE
Sbjct: 68  TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSNKMSE 127

Query: 143 IVELPNIEVDFCTESLNEFKLVTES 160
             E  N  V F + S +    + ES
Sbjct: 128 SSE-SNETVSFSSSSWSSVTSIEES 150

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BLAST of Chy1G020930 vs. ExPASy TrEMBL
Match: A0A0A0K6P8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 6.2e-106
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTT-PLPTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTT  LPTTPA KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAD LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSA LPSEEE+LSEIVELPNIE DFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 201
           SGQTTAEEICYPSSFYGVLWD
Sbjct: 181 SGQTTAEEICYPSSFYGVLWD 201

[Close]

BLAST of Chy1G020930 vs. ExPASy TrEMBL
Match: A0A5D3BW76 (Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002010 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.0e-105
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTT-PAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTPLPTT PAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSAALPSEEE+LSEIVELPNIE DF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 201
           S QTTAEE CYPSSFYGVLWD
Sbjct: 181 SEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Chy1G020930 vs. ExPASy TrEMBL
Match: A0A1S3CGW5 (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103500606 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.0e-105
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTT-PAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTPLPTT PAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSAALPSEEE+LSEIVELPNIE DF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 201
           S QTTAEE CYPSSFYGVLWD
Sbjct: 181 SEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Chy1G020930 vs. ExPASy TrEMBL
Match: A0A6J1D072 (dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC111015808 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.5e-79
Identity = 159/212 (75.00%), Postives = 170/212 (80.19%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPL--------PTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQP 60
           MAKPKNS+PQ  T P         P  PA KR RDCN+HP+FRGVRKRSWGKWVSEIRQP
Sbjct: 1   MAKPKNSDPQ--TIPAVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGKWVSEIRQP 60

Query: 61  RKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAA 120
           RK SRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P D+QAAAA
Sbjct: 61  RKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTPHDIQAAAA 120

Query: 121 KAAAMVHLNSAA--LPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMP- 180
           KAAAMV+  S +   PSEEE+LSEIVELPNIE DF TES +EF LVTESWEWWE VAMP 
Sbjct: 121 KAAAMVNFKSTSSPSPSEEEELSEIVELPNIEDDFATESQSEFALVTESWEWWECVAMPL 180

Query: 181 -LAAEFGSGYFSGQTTAEEICYPSSFYGVLWD 201
            LAAEFG  ++S QTTAEE  +P  FYG LWD
Sbjct: 181 ELAAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

[Close]

BLAST of Chy1G020930 vs. ExPASy TrEMBL
Match: A0A6J1HGN7 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111464158 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 160/216 (74.07%), Postives = 168/216 (77.78%), Query Frame = 0


Query: 1   MAKPKNSNPQN---------KTTPL-------PTTPAGKRPRDCNKHPVFRGVRKRSWGK 60
           MAKPK+S P            T P+       P  P  KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMP 120
           WVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 QDVQAAAAKAAAMVHLNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWE 180
            D+QAAAAKAAAM    +   PSEEE+LSEIVELPNIE DF TESLNEFKLVTESWEWWE
Sbjct: 121 HDIQAAAAKAAAMA--TALPSPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180

Query: 181 SVAMPLAAEFGSGYFSGQTTAEEICYPSSFYGVLWD 201
            VAMPLAAEFGS  FS Q  AE+  +P SFYG LWD
Sbjct: 181 YVAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]

BLAST of Chy1G020930 vs. NCBI nr
Match: XP_004141836.1 (dehydration-responsive element-binding protein 3 [Cucumis sativus])

HSP 1 Score: 392 bits (1006), Expect = 3.16e-137
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTP-LPTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTT  LPTTPA KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAD LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSA LPSEEE+LSEIVELPNIE DFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 200
           SGQTTAEEICYPSSFYGVLWD
Sbjct: 181 SGQTTAEEICYPSSFYGVLWD 201

[Close]

BLAST of Chy1G020930 vs. NCBI nr
Match: XP_008462184.1 (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo] >KAA0059324.1 dehydration-responsive element-binding protein 3-like [Cucumis melo var. makuwa] >TYK04003.1 dehydration-responsive element-binding protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 388 bits (996), Expect = 1.06e-135
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTT-PAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTTPLPTT PAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTPLPTTRPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGYF 180
           LNSAALPSEEE+LSEIVELPNIE DF TESLNEFKLVTESWEWWESVAMPLAAEFG GYF
Sbjct: 121 LNSAALPSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWESVAMPLAAEFGYGYF 180

Query: 181 SGQTTAEEICYPSSFYGVLWD 200
           S QTTAEE CYPSSFYGVLWD
Sbjct: 181 SEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Chy1G020930 vs. NCBI nr
Match: XP_038899641.1 (dehydration-responsive element-binding protein 3-like [Benincasa hispida])

HSP 1 Score: 362 bits (929), Expect = 1.79e-125
Identity = 181/202 (89.60%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL 60
           MAKPKNSNPQNK  PLP TP GKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL
Sbjct: 1   MAKPKNSNPQNKRNPLPLTPTGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWL 60

Query: 61  GTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHL 120
           GTFPTPEMAARAHDAAALCIKGDSAILNYPELA+FLPRPASLMP DVQAAAAKAAAMV+L
Sbjct: 61  GTFPTPEMAARAHDAAALCIKGDSAILNYPELAEFLPRPASLMPHDVQAAAAKAAAMVNL 120

Query: 121 NSAALPS--EEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSGY 180
           NSAALPS  EEE+LSEIVELPNIE DF TESL +F+LV+ESWEWWESVAMPLAAEF  GY
Sbjct: 121 NSAALPSPSEEEELSEIVELPNIEDDFGTESLKDFRLVSESWEWWESVAMPLAAEFDCGY 180

Query: 181 FSGQTTAEEICYPSSFYGVLWD 200
           FS QTTAEE  YPSSFYGVLWD
Sbjct: 181 FSDQTTAEESSYPSSFYGVLWD 202

[Close]

BLAST of Chy1G020930 vs. NCBI nr
Match: KAE8646475.1 (hypothetical protein Csa_016024 [Cucumis sativus])

HSP 1 Score: 340 bits (871), Expect = 8.42e-117
Identity = 171/178 (96.07%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTP-LPTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60
           MAKPKNSNPQNKTT  LPTTPA KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW
Sbjct: 1   MAKPKNSNPQNKTTSSLPTTPASKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIW 60

Query: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVH 120
           LGTFPTPEMAARAHDAAALCIKGDSAILNYPELAD LPRPASLMPQDVQAAAAKAAAMVH
Sbjct: 61  LGTFPTPEMAARAHDAAALCIKGDSAILNYPELADILPRPASLMPQDVQAAAAKAAAMVH 120

Query: 121 LNSAALPSEEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSG 177
           LNSA LPSEEE+LSEIVELPNIE DFCTESLNEFKLVTESWEWWESVAMPLAAEFGSG
Sbjct: 121 LNSAGLPSEEEELSEIVELPNIEDDFCTESLNEFKLVTESWEWWESVAMPLAAEFGSG 178

[Close]

BLAST of Chy1G020930 vs. NCBI nr
Match: XP_022146662.1 (dehydration-responsive element-binding protein 3 [Momordica charantia])

HSP 1 Score: 302 bits (774), Expect = 9.77e-102
Identity = 159/212 (75.00%), Postives = 170/212 (80.19%), Query Frame = 0


Query: 1   MAKPKNSNPQNKTTPL--------PTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQP 60
           MAKPKNS+PQ  T P         P  PA KR RDCN+HP+FRGVRKRSWGKWVSEIRQP
Sbjct: 1   MAKPKNSDPQ--TIPAVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGKWVSEIRQP 60

Query: 61  RKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAA 120
           RK SRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P D+QAAAA
Sbjct: 61  RKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTPHDIQAAAA 120

Query: 121 KAAAMVHLNSAALPS--EEEDLSEIVELPNIEVDFCTESLNEFKLVTESWEWWESVAMPL 180
           KAAAMV+  S + PS  EEE+LSEIVELPNIE DF TES +EF LVTESWEWWE VAMPL
Sbjct: 121 KAAAMVNFKSTSSPSPSEEEELSEIVELPNIEDDFATESQSEFALVTESWEWWECVAMPL 180

Query: 181 --AAEFGSGYFSGQTTAEEICYPSSFYGVLWD 200
             AAEFG  ++S QTTAEE  +P  FYG LWD
Sbjct: 181 ELAAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

[Close]

BLAST of Chy1G020930 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.9e-39
Identity = 87/153 (56.86%), Postives = 102/153 (66.67%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 82
           KR RD  KHPV+RGVR R+WGKWVSEIR+PRK SRIWLGTFPTPEMAARAHD AAL IKG
Sbjct: 40  KRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 99

Query: 83  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHL--------NSAALPS------- 142
            +AILN+PELAD  PRP SL P+D+Q AA KAA M           +S++L S       
Sbjct: 100 TAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESL 159

Query: 143 ---------EEEDLSEIVELPNIEVDFCTESLN 152
                    E E+L EIVELP++   +  +S N
Sbjct: 160 VLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

[Close]

BLAST of Chy1G020930 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-37
Identity = 88/166 (53.01%), Postives = 108/166 (65.06%), Query Frame = 0


Query: 23  KRP-RDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIK 82
           K+P +D  KHPV+RGVRKR+WGKWVSEIR+PRK SRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 83  GDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSE------------- 142
           G SAILN+P+LA   PRP+SL P+D+Q AA KAA M    S +  S              
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 143 ---------EEDLSEIVELPNI--EVDFCTESLNEFKLVTESWEWW 164
                     E+L EIVELP++    D  T+  NEF + ++S + W
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLW 188

[Close]

BLAST of Chy1G020930 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36
Identity = 89/166 (53.61%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 32  PVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPE 91
           P +RGVR R+WGKWVSEIR+PRK SRIWLGTF TPEMAARAHDAAAL IKG SA+LN+PE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 92  LADFLPRPASLMPQDVQAAAAKAAAM-------------------------------VHL 151
           LA +LPRPAS  P+DVQAAAA AAAM                                  
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 152 NSAALPSEE------EDLSEIVELPNIEVDFCTESLNEFKLVTESW 161
           +S+  PS E      E+LSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 161 SSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

[Close]

BLAST of Chy1G020930 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 86/168 (51.19%), Postives = 103/168 (61.31%), Query Frame = 0


Query: 2   AKPKNSNPQNKTTPLPTTPAGKRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLG 61
           A P+N+N + +     +  +        +HPV+RGVR RSWGKWVSEIRQPRK +RIWLG
Sbjct: 33  APPRNNNTRKRRRDSSSASSS----SSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLG 92

Query: 62  TFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLN 121
           TF T +MAARAHD AAL IKG SA+LN+PELA   PRPAS  P D+Q AAA+AAAMV   
Sbjct: 93  TFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEE 152

Query: 122 S-------------------AALPSEEEDLSEIVELPNIEVDFCTESL 151
                               AA   +EE L +IVELPNIE     ES+
Sbjct: 153 KLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESV 196

[Close]

BLAST of Chy1G020930 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34
Identity = 81/145 (55.86%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 23  KRPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKG 82
           K  ++ NK PV+RGVR RSWGKWVSEIR+PRK SRIWLGTFPT EMA RAHD AA+ IKG
Sbjct: 8   KEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKG 67

Query: 83  DSAILNYPELADFLPRPASLMPQDVQAAAAKAAAMVHLNSAALPSEEE--------DLSE 142
            SAILN+PEL+  LPRP SL P+DV+AAA KAA M   ++ A  S+ E         +SE
Sbjct: 68  TSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSNKMSE 127

Query: 143 IVELPNIEVDFCTESLNEFKLVTES 160
             E  N  V F + S +    + ES
Sbjct: 128 SSE-SNETVSFSSSSWSSVTSIEES 150

The following BLAST results are available for this feature:

BLAST of Chy1G020930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	4.1e-38	56.86	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	5.0e-36	53.01	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
O80654	2.5e-35	53.61	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LU18	2.1e-34	51.19	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	4.0e-33	55.86	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Chy1G020930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6P8	6.2e-106	96.52	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447150 PE=...	[more]
A0A5D3BW76	9.0e-105	96.52	Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuw...	[more]
A0A1S3CGW5	9.0e-105	96.52	dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1D072	6.5e-79	75.00	dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1HGN7	1.4e-78	74.07	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Chy1G020930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141836.1	3.16e-137	96.52	dehydration-responsive element-binding protein 3 [Cucumis sativus]	[more]
XP_008462184.1	1.06e-135	96.52	PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo] ...	[more]
XP_038899641.1	1.79e-125	89.60	dehydration-responsive element-binding protein 3-like [Benincasa hispida]	[more]
KAE8646475.1	8.42e-117	96.07	hypothetical protein Csa_016024 [Cucumis sativus]	[more]
XP_022146662.1	9.77e-102	75.00	dehydration-responsive element-binding protein 3 [Momordica charantia]	[more]

BLAST of Chy1G020930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	2.9e-39	56.86	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	3.5e-37	53.01	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	1.8e-36	53.61	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	1.5e-35	51.19	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	2.8e-34	55.86	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 34..45 score: 65.61 coord: 56..72 score: 66.52
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 33..96 e-value: 3.9E-33 score: 126.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 32..82 e-value: 6.4E-15 score: 55.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 33..90 score: 22.721256
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 34..92 e-value: 6.22215E-21 score: 80.0083
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 33..91 e-value: 7.5E-24 score: 85.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 5..121
None	No IPR available	PANTHER	PTHR31985:SF177	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE	coord: 5..121
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 33..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G020930.1	Chy1G020930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity