Chy1G020770 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGAAGGTAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTGTAAAGCTCTGGATCTCTATGATGTTTTTGACTGCAAATCCATTGCTGCCCACATAAAAAAGGTCCTCTCTCTTTCTCCCTCCCCCTCGTTTGATGTGTATGTAGGAGGAAATGGTGGGTTGCAGATGTTTTTTCTTGACTTTAATAGCAGAACCGTGTTGGTTCTGTGTATGTGTAGAAGAAAAGAGGTCGGTAAGAGAATCTCAGGCTTTGATCCTTAAACTTGTTTGGTTGTTGATTTGCAGGACTTCGACAACAAATATGGAAGCGGATGGCAATGTGTGGTTGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTGGAGACCCTCAACTTTCTCATCTTCAAAGGGGTGACTTCTTCGGCCCCATGA ATGTTGGAAGGTAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTGTAAAGCTCTGGATCTCTATGATGTTTTTGACTGCAAATCCATTGCTGCCCACATAAAAAAGGACTTCGACAACAAATATGGAAGCGGATGGCAATGTGTGGTTGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTGGAGACCCTCAACTTTCTCATCTTCAAAGGGGTGACTTCTTCGGCCCCATGA ATGTTGGAAGGTAAAGCTTTGGTACAGGATACAGATATGCCTGGCAAGATGCAGATCCAAGCCATGGACGCTGCTTGTAAAGCTCTGGATCTCTATGATGTTTTTGACTGCAAATCCATTGCTGCCCACATAAAAAAGGACTTCGACAACAAATATGGAAGCGGATGGCAATGTGTGGTTGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTGGAGACCCTCAACTTTCTCATCTTCAAAGGGGTGACTTCTTCGGCCCCATGA MLEGKALVQDTDMPGKMQIQAMDAACKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSSAP* Homology
BLAST of Chy1G020770 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.2e-16 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-15 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-15 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-15 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy TrEMBL
Match: A0A5A7UW48 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002230 PE=3 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy TrEMBL
Match: A0A1S3CGU5 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500588 PE=3 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy TrEMBL
Match: A0A0A0K947 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.1e-47 Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy TrEMBL
Match: A0A6J1KDK4 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111494671 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.6e-43 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Chy1G020770 vs. ExPASy TrEMBL
Match: A0A6J1HH84 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111464299 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.6e-43 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Chy1G020770 vs. NCBI nr
Match: XP_008462164.1 (PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cucumis melo] >KAA0059304.1 dynein light chain LC6, flagellar outer arm-like [Cucumis melo var. makuwa] >TYK04024.1 dynein light chain LC6, flagellar outer arm-like [Cucumis melo var. makuwa]) HSP 1 Score: 197 bits (502), Expect = 9.21e-64 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Chy1G020770 vs. NCBI nr
Match: XP_011659570.1 (dynein light chain LC6, flagellar outer arm [Cucumis sativus] >KGN45379.1 hypothetical protein Csa_016911 [Cucumis sativus]) HSP 1 Score: 196 bits (498), Expect = 3.75e-63 Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Chy1G020770 vs. NCBI nr
Match: XP_038897874.1 (dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]) HSP 1 Score: 196 bits (498), Expect = 3.75e-63 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Chy1G020770 vs. NCBI nr
Match: XP_022964212.1 (dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata] >XP_023000412.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima] >KAG6593463.1 hypothetical protein SDJN03_12939, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025803.1 hypothetical protein SDJN02_12301 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 182 bits (462), Expect = 1.17e-57 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Chy1G020770 vs. NCBI nr
Match: XP_023513963.1 (dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182 bits (462), Expect = 1.17e-57 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Chy1G020770 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 160.2 bits (404), Expect = 8.2e-40 Identity = 73/93 (78.49%), Postives = 85/93 (91.40%), Query Frame = 0
BLAST of Chy1G020770 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 151.4 bits (381), Expect = 3.8e-37 Identity = 71/92 (77.17%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Chy1G020770 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 104.0 bits (258), Expect = 7.0e-23 Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 0
BLAST of Chy1G020770 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-21 Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Chy1G020770 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 83.6 bits (205), Expect = 9.8e-17 Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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