Chy1G020100 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGCCATCAGGATCTTAGCCACAAGGCTGGTGAGATTGCTGGCCAAGCTCAGGTTAAGAGAGATGAGATGATGAACCAATCCACTACTCATGATCAATCATCTGCTGCCCAAACTGCGACTGACCTCAAGGACCAAGCAGCAAGTTTCCTTCAACAGGTGATTTTTTGATATTGTTATTGTTATTTAATTAGCAAAATGAATGAACTAAAATGATTTTTTGGTGTGAAATAATAATGTGTATAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACGGCCAACACCAACAATCCAGCCAACAATCCTACCAACAATCCAGCCAACAACCCTACCAGCAATCCAACCAACAACCCTACCAGCAATCCATCCACTAGAATTTAA ATGGCAAGCCATCAGGATCTTAGCCACAAGGCTGGTGAGATTGCTGGCCAAGCTCAGGTTAAGAGAGATGAGATGATGAACCAATCCACTACTCATGATCAATCATCTGCTGCCCAAACTGCGACTGACCTCAAGGACCAAGCAGCAAGTTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACGGCCAACACCAACAATCCAGCCAACAATCCTACCAACAATCCAGCCAACAACCCTACCAGCAATCCAACCAACAACCCTACCAGCAATCCATCCACTAGAATTTAA ATGGCAAGCCATCAGGATCTTAGCCACAAGGCTGGTGAGATTGCTGGCCAAGCTCAGGTTAAGAGAGATGAGATGATGAACCAATCCACTACTCATGATCAATCATCTGCTGCCCAAACTGCGACTGACCTCAAGGACCAAGCAGCAAGTTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCCGCTGAGGCAGTGAAGAACACACTTGGGATGAACACTGATAACACTTCAAACACGGCCAACACCAACAATCCAGCCAACAATCCTACCAACAATCCAGCCAACAACCCTACCAGCAATCCAACCAACAACCCTACCAGCAATCCATCCACTAGAATTTAA MASHQDLSHKAGEIAGQAQVKRDEMMNQSTTHDQSSAAQTATDLKDQAASFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTANTNNPANNPTNNPANNPTSNPTNNPTSNPSTRI* Homology
BLAST of Chy1G020100 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of Chy1G020100 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 36/76 (47.37%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of Chy1G020100 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.1e-04 Identity = 40/114 (35.09%), Postives = 50/114 (43.86%), Query Frame = 0
BLAST of Chy1G020100 vs. ExPASy TrEMBL
Match: A0A0A0K8V2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433240 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43 Identity = 111/122 (90.98%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Chy1G020100 vs. ExPASy TrEMBL
Match: A0A1S3CF46 (late embryogenesis abundant protein 1 OS=Cucumis melo OX=3656 GN=LOC103499779 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38 Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0
BLAST of Chy1G020100 vs. ExPASy TrEMBL
Match: A0A5D3CF20 (Late embryogenesis abundant protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002210 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33 Identity = 93/119 (78.15%), Postives = 100/119 (84.03%), Query Frame = 0
BLAST of Chy1G020100 vs. ExPASy TrEMBL
Match: A0A6J1KJU5 (late embryogenesis abundant protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494669 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26 Identity = 78/108 (72.22%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Chy1G020100 vs. ExPASy TrEMBL
Match: A0A6J1HHY8 (late embryogenesis abundant protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464504 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25 Identity = 77/108 (71.30%), Postives = 86/108 (79.63%), Query Frame = 0
BLAST of Chy1G020100 vs. NCBI nr
Match: XP_004136082.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN45294.1 hypothetical protein Csa_016519 [Cucumis sativus]) HSP 1 Score: 185 bits (469), Expect = 5.43e-58 Identity = 111/122 (90.98%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Chy1G020100 vs. NCBI nr
Match: XP_008461082.1 (PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]) HSP 1 Score: 168 bits (426), Expect = 1.71e-51 Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0
BLAST of Chy1G020100 vs. NCBI nr
Match: KAA0058773.1 (late embryogenesis abundant protein 1 [Cucumis melo var. makuwa] >TYK10567.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 153 bits (386), Expect = 1.65e-45 Identity = 93/119 (78.15%), Postives = 100/119 (84.03%), Query Frame = 0
BLAST of Chy1G020100 vs. NCBI nr
Match: XP_038899752.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 133 bits (335), Expect = 9.60e-38 Identity = 80/110 (72.73%), Postives = 91/110 (82.73%), Query Frame = 0
BLAST of Chy1G020100 vs. NCBI nr
Match: XP_023000409.1 (late embryogenesis abundant protein 1 [Cucurbita maxima]) HSP 1 Score: 129 bits (324), Expect = 4.81e-36 Identity = 78/107 (72.90%), Postives = 86/107 (80.37%), Query Frame = 0
BLAST of Chy1G020100 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related ) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11 Identity = 53/119 (44.54%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of Chy1G020100 vs. TAIR 10
Match: AT1G15415.1 (The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol. ) HSP 1 Score: 47.4 bits (111), Expect = 9.5e-06 Identity = 46/112 (41.07%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Chy1G020100 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 47.4 bits (111), Expect = 9.5e-06 Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Chy1G020100 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.6e-05 Identity = 40/114 (35.09%), Postives = 50/114 (43.86%), Query Frame = 0
BLAST of Chy1G020100 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.6e-05 Identity = 40/114 (35.09%), Postives = 50/114 (43.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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