Chy1G019400 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGGCGAGGCCAAAAGCGGGGGAGCCAGCGGCGGAGCAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGATAAAAAGCACGTCGCCGCTGGCATCGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGGTTTTTGTTCTTTCCTTTAACAATTTTTGTTTTTGTTACTCTATCGCCGATGATTTTTTGTTGCAGTTGAGAGAAATTGATGTGGGAAAACAAGTTTTTTTCCCGGGATTTGGAGAAGGGAGGGCTTTAAATATTGACGTATCAAGTGCACTAAGAAGATATTGATTCTTGAATGGAGTTATTTTTTAAACTTGTTAGTTTTTCTTGGAGAATTCAGCAATCTTTTGATTGCAACAGTGGACATTTGGAAGTATGTTCGATTTTCCAATGTGTAATTTAGGGTTTCAGAATCTTTGCAGCTTCAATAAGATATGCATATTCTTAGTCTTGTTTGCCTTTGGCAATTGGTACTGGGTGGCTTAGGGTTTAGGATTTGCAAGTTCTGCTGGTTGGGGTGCTCCTGTGATTTGGGAATGAGAAACTCTAGTCTATCAGGGTAATATCATTGTGGATTTTTATGATACTGATTTTTTTTACTTAAGAACTGTTGGGACTGTGTCTGATGGATGTGCTCTAGAACAACATATTTGAGTGATTATGTCTTCATATACAAACACCTCACTCTTAGATTGTTTTCATGGTTGACTTGGTTTAGCTAAACTGAAGTGATTATTTCTCATAAGATAAGATCATAGGCTCATAAATAGTGCCAATGTGACTACGTAAGCATAACTCAATTACTTTAGGCATATATATCAATCAAGTGATTACATGTTCAAATCCTCCAACATCAGATGTTGAGCTAAAGGAAATGCTCGTAATTAGTAAGTTTAGTAAGAGCCACCCAAAATACCTCTTGAAAATAGTTGTCAAAATATGTAGTCTTGAAAGTACTTTTTGAAACATATAGTTTGAAAACTATTTTTCGAAGAAACTTCCAAATGACCCCTACACATGAAGTAGAAGTGACACTTCGCAAGTCAATAGGTGGTGAAACAAGAATCTGTCCCTCTTTCCTCTTTTCCATACGGATTTGAGACTGTATTTTATTTCGATATGAGTTGTAGGAGGTTGTAATTCTACATGACTTATCCCTACTTAATTGTTTGCACTCAGGATCAAAACATCAGTCTCACCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTGCATCATCAGCTAAATGA ATGAGCGGCGAGGCCAAAAGCGGGGGAGCCAGCGGCGGAGCAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGATAAAAAGCACGTCGCCGCTGGCATCGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGGATCAAAACATCAGTCTCACCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTGCATCATCAGCTAAATGA ATGAGCGGCGAGGCCAAAAGCGGGGGAGCCAGCGGCGGAGCAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGATAAAAAGCACGTCGCCGCTGGCATCGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGGATCAAAACATCAGTCTCACCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTGCATCATCAGCTAAATGA MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRGSKHQSHQDYMERADKARSQRLSSGASSAK* Homology
BLAST of Chy1G019400 vs. ExPASy TrEMBL
Match: A0A5D3CFG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001610 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36 Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy1G019400 vs. ExPASy TrEMBL
Match: A0A1S3CEK3 (uncharacterized protein LOC103499845 OS=Cucumis melo OX=3656 GN=LOC103499845 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36 Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy1G019400 vs. ExPASy TrEMBL
Match: A0A6J1GP50 (uncharacterized protein LOC111455862 OS=Cucurbita moschata OX=3662 GN=LOC111455862 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.5e-34 Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of Chy1G019400 vs. ExPASy TrEMBL
Match: A0A6J1JZC0 (uncharacterized protein LOC111488802 OS=Cucurbita maxima OX=3661 GN=LOC111488802 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.0e-33 Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of Chy1G019400 vs. ExPASy TrEMBL
Match: A0A6J1DAT5 (uncharacterized protein LOC111018966 OS=Momordica charantia OX=3673 GN=LOC111018966 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 9.7e-29 Identity = 70/90 (77.78%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Chy1G019400 vs. NCBI nr
Match: XP_004135879.1 (uncharacterized protein LOC101214375 [Cucumis sativus]) HSP 1 Score: 159 bits (401), Expect = 9.31e-49 Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy1G019400 vs. NCBI nr
Match: XP_008461185.1 (PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo] >KAA0058705.1 hypothetical protein E6C27_scaffold339G001750 [Cucumis melo var. makuwa] >TYK10511.1 hypothetical protein E5676_scaffold459G001610 [Cucumis melo var. makuwa]) HSP 1 Score: 158 bits (399), Expect = 1.88e-48 Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy1G019400 vs. NCBI nr
Match: XP_022953259.1 (uncharacterized protein LOC111455862 [Cucurbita moschata] >XP_023547796.1 uncharacterized protein LOC111806650 [Cucurbita pepo subsp. pepo] >KAG6575633.1 hypothetical protein SDJN03_26272, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014187.1 hypothetical protein SDJN02_24361 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151 bits (381), Expect = 1.05e-45 Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of Chy1G019400 vs. NCBI nr
Match: XP_022992483.1 (uncharacterized protein LOC111488802 [Cucurbita maxima]) HSP 1 Score: 150 bits (378), Expect = 3.01e-45 Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of Chy1G019400 vs. NCBI nr
Match: XP_038897164.1 (uncharacterized protein LOC120085312 isoform X2 [Benincasa hispida]) HSP 1 Score: 142 bits (359), Expect = 6.27e-42 Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Chy1G019400 vs. TAIR 10
Match: AT1G80890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16000.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 3.2e-24 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of Chy1G019400 vs. TAIR 10
Match: AT1G16000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 105.9 bits (263), Expect = 1.6e-23 Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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