Chy1G018290 (gene) Cucumber (hystrix) v1

Overview
NameChy1G018290
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRibosomal protein
LocationchrH01: 23772559 .. 23776238 (+)
RNA-Seq ExpressionChy1G018290
SyntenyChy1G018290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGCCACTTGTAATCCCACACTTCACTCCTCCTTTACCATGGCCCACACTTCATCCGTACACCCACAAGACCCTTCTTCCCTTCTCTCTTTCAGACCCATTGCTGCCTCTTCCACCGCCAATATCTTCTCTTTATGCCACCCCTTAATTCTGCAGCGCCGGGGAGGGAGGTCCATCAATTGGGTCGACCTTAAATTTGGGAGAGAATGTAGGGATCATTTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAGGTGGATGAGGATGTGGAAGAGAATGGAGAAGAGGGAAATGGTGGAACTGCTACTTCAGTTCTGCCCAAGATTAAGAAGGGAAAGGCTGCATTGCCTCTCAAAAGGGACAGAGTAAGCTTGAGCTTAAGTTCTTGTATTGCCCTGTTTTCAATCTAGTTGATTACCATTTTGGATATGGTTTTAGAGTTTGATTGTTGGGTTTTACTTCGTTTTAGGTTTTGTTTTGTTGTTGTAGCTCTGACCTCCGGGGTTTTAATTTTAGATACTGTTGCCTTTTTATGGAGATGAAATATGTCTTAGAACTTTTACTTTTGTTTTCCTCTGTCTACTTCCATTTTTTGTCCTCCACAAATTAGGCTGGTTTTTAATGTTGGTTTGGCTCATCATTTTTTAGTGAGGCCCATAAGTATGCATTCTAAAGGGCCAGGTATGATGTCTCAAGTGATCAATTGTTTCAATGTGAAATGATTCATGTAGATGGAAGGGTACTTCTTGTTGGGGAAATCTAGATACCATTAATGGACCGTTCGGCTGGTTGGCTTTGCCGTCCCAGTAAAACTTTTGTACATGCGTCTCTAGTTTGTTATTCTTGTGTTCATTGGTTCTTTCCCTTCTTACGTATATGTTTGTTGCAGTTCTGTAATTTACTTAATTTTGATTCAACATCTAGTTAAATTTTTTCTTGAATTGTTCTTTCTATTTATAGTTTCATTATCTTCTAGGATTAATAGTTCCTATCATGTCTATTTTTGATCAATGGCTTCATTAGTTGACTTGGAAAACTCTAGCAATCGGGCGGTTTAGTACTGTTTCTTTGCTTTCTACCTTCCTTTGTAGCATCAGCCGTTCCAGTAGTTGTTATCCATATTTTCTTTTGAGTTCTACTCTGAACCAGACAATAGATTACGAGAGAGGTTCATAAAGGATATGTGCATTACTTTTAGTTCATATTGTAAGCTGTGTTCTCTTAAAATATGTATTTGCCCCCTTCTCTTATTACTATTGAATCAGCTTTGACATGAAACTGTGTTCTGAAAATGTCCAGACCCGGTCAAAGAGGTTCCTGGAAATTCAAAAACTAAGGGAAACCAAAATGGAGTACGACCTGAAAACAGCAATATCTTTGTTGAAACAAACGTCCAGCACAAAATTTGTGGAAACTGCTGAAGCCCACTTACGATTAAACATTGATCCCAAATATAATGATCAACAGCTGAGAGCAACTGTAAGTTTTCTTGGTAATTGCATGATAATTGACGAAGAAAGTTAAAAGTTATAAGAAAATATCGGTTCCGTCTCAAAACCAAATGGTATTGAGAGTAGTCCATGTATCTTATAAAGATGGTGAGGCTCCTTGATTTTTTTAATGTGTGATTGTCAACAAAAGTCCTACCTACTACTTGATTTTACTATATGTATGTCCTAAATCTTCAATGCTCACTTTTTTCAAAGGTAAATTTGCCCAAGGGAACTGGACAGACAGTAAAGGTAGCTGTTCTTACTCAAGGTAATCACTAAATTTGACTTGAATGATACTTTCATTGGTTAGGATTCAATGGTAGAAGTATCTAGTTTTCTATGAGTTCTGGTTCCATTTCTTTCAATGAGGGAGTATCGTGGAATGGATGTTAATACATGTTATATGAACTTTAAAAAGTCTCAATGGAAGCTTGGTTTCTACCCAAAAAAAAAATAGCAGGTATTATTGTCTCCGAAGTGTTTGTGGATTAGATAGTATTTGGTGGAGAATCCTCTACTTGAAAGGGAGGTTTGCTTGCTCTGTTAGTGTCTTAGTGAGATTGCTTAAACTATCGTGGCGTTATTTATATGAATTTCCCTCTATTATTGATGAGTGAATATCCTTCTTGTAACCAGTGTGACATATGTGAGACATGGTATTTGGAGAATGAAAATATTTATTTGTTCTTTATTAAATTTTCATACAGTTTTGCAGTGTGACATGGTTAATACTGATTAGTTGGTTTTCCCCCTTGAAATCAGTTTAAAAATTTGAGTGAACAGAATGAGATGAATGCTAGGATATGACTTTTTAATTAACTCTCTTATATATATTTGTTATTTATTTCCTCGATGTGGTCATGTGGATTCGCTCTCCCATCTCTCTAATCAACTATAAATTTTGAGATTCAGCTTACAATGGCCATATTATCGTGCTGCTTTTTAAAAAATGCTGTTTGTATCTGCATCATATCTCTTTTCATGGCGCATTTTTTCTTCTTCAGTTTTCATTTTCTTTCACTCGTTTCATATAATCTTATTGCTTTCTGAATCATGTAGGTGAAAAATTCGACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTGCTTCACCAGATATGATGCCCAAGGTATGGTTCTTAAATCTTTTTACTGCTATACATTGTGGTGGGTTTCCAAAAGTATAAGTATTTCTAACAACATTGTCCATAGCAATCAAATAGTTTTCACATGTACTTTGAAACTGAGTACCAAATATGATTCCGATTTCCTTGTATGCAATACTACCGATAATTTTTTCTTTCATGCTTGTAAGAAAGTATTTTTGGATACTTCTTGCACCATCTATGACCAGAATTAAGAAGATACAGTATCGTGTTCGTGCCACAGATTTAAAGAGACCAAGTTAAATAAAGCCTACAGAATTTTAACTCATATGCACGTGAATGGTTTCGGTGTTCACTTTTGGAGTTGGTGCTGATTTTGAGATATTTTAGTTACTTTGTGGCAACTATAAACAAACAATTAATCTGTTAACCCGGTCCTCTCTGTTTGTACCAGGTTGCAAGTCTAGGGAAACTTCTAGGACCTCGAGGACTGATGCCGAATCCAAAAGCTGGCACAGTTACAACAAATATACCTCAGGTATAGATAAGAACCATCTACATTTGTATGCATCAAACTTTGGCAATAAAATTGTACATATTATATTAGCTAAGGAGAGAAGGTCTTTCTTGAGATATAGATTGGTAATAGCTTTGTCCTGTTTCAGGCTATAGCAGAGTTCAAGCAGGGAAAAGTTGAATACAGAGCAGATAAAACCGGGATTGTTCACTTACCTTTTGGAAAGGCAGACTTTTCCGAAGACGACCTCCTTGTGAACTTACTTTCTGCAATAGTATGTTCTTTCCTAATTCAAATTCTAAAGAACTACATTAGTATCTTTTTTTTTTTACCATATTGATTCGTTTACATTAATCCAACAGAAATCAGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAGGAGTGCGCATATATGCTCATCGATGGGACCTTCAATTCGATTAAACATAAGGGAAATGCTTGATTACAAGATCCCATCATCAAATGCTTGA

mRNA sequence

ATGGCAATGGCCACTTGTAATCCCACACTTCACTCCTCCTTTACCATGGCCCACACTTCATCCGTACACCCACAAGACCCTTCTTCCCTTCTCTCTTTCAGACCCATTGCTGCCTCTTCCACCGCCAATATCTTCTCTTTATGCCACCCCTTAATTCTGCAGCGCCGGGGAGGGAGGTCCATCAATTGGGTCGACCTTAAATTTGGGAGAGAATGTAGGGATCATTTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAGGTGGATGAGGATGTGGAAGAGAATGGAGAAGAGGGAAATGGTGGAACTGCTACTTCAGTTCTGCCCAAGATTAAGAAGGGAAAGGCTGCATTGCCTCTCAAAAGGGACAGAACCCGGTCAAAGAGGTTCCTGGAAATTCAAAAACTAAGGGAAACCAAAATGGAGTACGACCTGAAAACAGCAATATCTTTGTTGAAACAAACGTCCAGCACAAAATTTGTGGAAACTGCTGAAGCCCACTTACGATTAAACATTGATCCCAAATATAATGATCAACAGCTGAGAGCAACTGTAAATTTGCCCAAGGGAACTGGACAGACAGTAAAGGTAGCTGTTCTTACTCAAGGTGAAAAATTCGACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTGCTTCACCAGATATGATGCCCAAGGTTGCAAGTCTAGGGAAACTTCTAGGACCTCGAGGACTGATGCCGAATCCAAAAGCTGGCACAGTTACAACAAATATACCTCAGGCTATAGCAGAGTTCAAGCAGGGAAAAGTTGAATACAGAGCAGATAAAACCGGGATTGTTCACTTACCTTTTGGAAAGGCAGACTTTTCCGAAGACGACCTCCTTGTGAACTTACTTTCTGCAATAAAATCAGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAGGAGTGCGCATATATGCTCATCGATGGGACCTTCAATTCGATTAAACATAAGGGAAATGCTTGATTACAAGATCCCATCATCAAATGCTTGA

Coding sequence (CDS)

ATGGCAATGGCCACTTGTAATCCCACACTTCACTCCTCCTTTACCATGGCCCACACTTCATCCGTACACCCACAAGACCCTTCTTCCCTTCTCTCTTTCAGACCCATTGCTGCCTCTTCCACCGCCAATATCTTCTCTTTATGCCACCCCTTAATTCTGCAGCGCCGGGGAGGGAGGTCCATCAATTGGGTCGACCTTAAATTTGGGAGAGAATGTAGGGATCATTTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAGGTGGATGAGGATGTGGAAGAGAATGGAGAAGAGGGAAATGGTGGAACTGCTACTTCAGTTCTGCCCAAGATTAAGAAGGGAAAGGCTGCATTGCCTCTCAAAAGGGACAGAACCCGGTCAAAGAGGTTCCTGGAAATTCAAAAACTAAGGGAAACCAAAATGGAGTACGACCTGAAAACAGCAATATCTTTGTTGAAACAAACGTCCAGCACAAAATTTGTGGAAACTGCTGAAGCCCACTTACGATTAAACATTGATCCCAAATATAATGATCAACAGCTGAGAGCAACTGTAAATTTGCCCAAGGGAACTGGACAGACAGTAAAGGTAGCTGTTCTTACTCAAGGTGAAAAATTCGACGAAGCAAAAAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTGCTTCACCAGATATGATGCCCAAGGTTGCAAGTCTAGGGAAACTTCTAGGACCTCGAGGACTGATGCCGAATCCAAAAGCTGGCACAGTTACAACAAATATACCTCAGGCTATAGCAGAGTTCAAGCAGGGAAAAGTTGAATACAGAGCAGATAAAACCGGGATTGTTCACTTACCTTTTGGAAAGGCAGACTTTTCCGAAGACGACCTCCTTGTGAACTTACTTTCTGCAATAAAATCAGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAGGAGTGCGCATATATGCTCATCGATGGGACCTTCAATTCGATTAAACATAAGGGAAATGCTTGATTACAAGATCCCATCATCAAATGCTTGA

Protein sequence

MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRSINWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA*
Homology
[Close]
BLAST of Chy1G018290 vs. ExPASy Swiss-Prot
Match: Q9LE95 (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.9e-124
Identity = 244/360 (67.78%), Postives = 281/360 (78.06%), Query Frame = 0 

Query: 3   MATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRSIN 62
           MAT  P    S   A +S  + QDPS    F+P+  +S     SLC  L L +R    + 
Sbjct: 1   MATAAPP-SLSLCYASSSFQYQQDPSFQTHFKPLLLNS-----SLCR-LTLNQRERSCLK 60

Query: 63  WVDLKFGRECRDHL---VVAALAAEIEVDEDVEENGEEGNGGTATSVLP-KIKKGKAALP 122
           WVD    ++    +   V+AA+AAE EV +  EE GE  +GG AT   P K KKGKAALP
Sbjct: 61  WVDFTSQKQSPKSVSFRVLAAVAAEAEVADMEEEEGE--SGGVATLPSPTKPKKGKAALP 120

Query: 123 LKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQ 182
           LK DRTRSKRFLEIQKLRE K EYDLKTA+SL+KQ SSTKFVETAEAH RLNIDPKYNDQ
Sbjct: 121 LKSDRTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYNDQ 180

Query: 183 QLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIAS 242
           QLRATV+LPKGTG+TVK+AVL QG+K DEAK AGAD+VGGE+LIEQIKGGFM+FDKLIA+
Sbjct: 181 QLRATVSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIAT 240

Query: 243 PDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGK 302
            DMM KVASLG++LGPRGLMP PKAGTVT N+ QA+ EFK+GKVE+R DKTGIVH+PFGK
Sbjct: 241 SDMMAKVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIVHIPFGK 300

Query: 303 ADFSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSS 359
            +F E+DLL+NL + IKSVE NKPTGAKGVYW+SAHI SSMGPSIRLNIREMLDYK PS+
Sbjct: 301 LNFEEEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYKPPSN 351

[Close]
BLAST of Chy1G018290 vs. ExPASy Swiss-Prot
Match: Q9LY66 (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-122
Identity = 248/363 (68.32%), Postives = 284/363 (78.24%), Query Frame = 0 

Query: 3   MATCNPTLHSSFTMAH-TSSVHPQD---PSSLLSFRPIAASSTANIFSLCHPLILQRRGG 62
           MA C    HSS  +A+  +S   QD     SL SF    ASS  N   L  PL+L    G
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSF----ASSRPN--HLSFPLLLL---G 60

Query: 63  RSINWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVL--PKIKKGKAA 122
            S +       R      +V+A+AA  E D D EE+ E+    TAT+VL  PK KKGKAA
Sbjct: 61  GSRDRRCAAIDRASNHKFIVSAVAA--EADLDTEEDLEQ----TATAVLDPPKPKKGKAA 120

Query: 123 LPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYN 182
           L LKRDRTRSKRFLEIQKLRETK EYD+ TAISLLKQT++T+FVE+ EAH RLNIDPKYN
Sbjct: 121 LVLKRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYN 180

Query: 183 DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 242
           DQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLI
Sbjct: 181 DQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLI 240

Query: 243 ASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPF 302
           ASPDMM KVA LGK+LGPRGLMPNPKAGTVT NIPQAI EFK+GKVE+RADKTGIVH+PF
Sbjct: 241 ASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPF 300

Query: 303 GKADFSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIP 360
           GK +F+E+DLL+N L+A+KSVE NKP GAKGVYW+SAHICSSMGPSI+LNIREM+D+K P
Sbjct: 301 GKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPP 346

[Close]
BLAST of Chy1G018290 vs. ExPASy Swiss-Prot
Match: Q3MA18 (50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rplA PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-75
Identity = 140/230 (60.87%), Postives = 184/230 (80.00%), Query Frame = 0 

Query: 126 SKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQLRATVN 185
           S+R  E+Q   E + EY    A+SLLK+T++ KF E AEAH+RL IDPKY DQQLR TV 
Sbjct: 6   SRRLRELQAKVEDR-EYGPLDALSLLKETATAKFAEAAEAHIRLGIDPKYTDQQLRTTVA 65

Query: 186 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 245
           LPKGTGQ V+VAV+ +GEK  EA NAGAD+ G E+LI++I+ G M+FDKLIA+PD+MP+V
Sbjct: 66  LPKGTGQIVRVAVIARGEKVTEASNAGADVFGSEELIDEIQKGRMDFDKLIATPDVMPQV 125

Query: 246 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 305
           A LGK+LGPRGLMP+PK GTVT +I  AIAEFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 126 AKLGKMLGPRGLMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPED 185

Query: 306 LLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKI 356
           LLVNL +  ++++ N+P+GAKG YWR+ ++ ++MGPSIR++I  + DYK+
Sbjct: 186 LLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234

[Close]
BLAST of Chy1G018290 vs. ExPASy Swiss-Prot
Match: B0JNQ5 (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rplA PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-75
Identity = 141/230 (61.30%), Postives = 184/230 (80.00%), Query Frame = 0 

Query: 126 SKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQLRATVN 185
           S+R  + Q   E K  Y+   A++LLK+ ++ KF ETAEAH+RL IDPKY DQQLR TV+
Sbjct: 6   SRRLRDAQAKVENK-AYEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRTTVS 65

Query: 186 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 245
           LPKGTG+TV+VAV+T+GEK  EA NAGAD+VG E+LIE+I  G M+F+ LIA+PDMMPKV
Sbjct: 66  LPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMMPKV 125

Query: 246 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 305
           A LG+ LGPRGLMP+PK GTVTT++  AIAEFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 126 AKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAED 185

Query: 306 LLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKI 356
           LLVNL +  ++V+ N+P+GAKG YWR+ ++ SSMGPSI+++I  + D K+
Sbjct: 186 LLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234

[Close]
BLAST of Chy1G018290 vs. ExPASy Swiss-Prot
Match: P49208 (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL1 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 3.4e-75
Identity = 144/168 (85.71%), Postives = 155/168 (92.26%), Query Frame = 0 

Query: 110 IKKGKAALPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRL 169
           +++GK    LK DR RSKRFLEIQKLRE K EYDLKTAISL+K+T+ TKFVET EAH RL
Sbjct: 41  LRQGKLHWRLKSDRVRSKRFLEIQKLRELKKEYDLKTAISLVKETAKTKFVETVEAHFRL 100

Query: 170 NIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGF 229
           NIDPKYNDQQLRATV+LPKGTG+ +KVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGF
Sbjct: 101 NIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGF 160

Query: 230 MEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEF 278
           MEFDKLIASPDMMPKVASLGK+LGPRGLMPNPKAGTVT NIPQAIAEF
Sbjct: 161 MEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIAEF 208

[Close]
BLAST of Chy1G018290 vs. ExPASy TrEMBL
Match: A0A0A0K886 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_7G420870 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 6.1e-197
Identity = 354/360 (98.33%), Postives = 356/360 (98.89%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATCNPTLHSS TMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS
Sbjct: 1   MAMATCNPTLHSSLTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK
Sbjct: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEK DEAKNAGADLVGG+DLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKLDEAKNAGADLVGGKDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLLSAIKSVEVNKPTGAKGVYW+SAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 360

[Close]
BLAST of Chy1G018290 vs. ExPASy TrEMBL
Match: A0A5D3CGN7 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00300 PE=3 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 4.4e-195
Identity = 351/360 (97.50%), Postives = 353/360 (98.06%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATCNPT+HSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS
Sbjct: 1   MAMATCNPTVHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
            NWVDLKFGRECRDHLVVAALAAEIEV E VEENGEEGNGGTATS LPKIKKGKAALPLK
Sbjct: 61  TNWVDLKFGRECRDHLVVAALAAEIEVAEVVEENGEEGNGGTATSALPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKF ETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFAETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLLSAIKSVE NKPTGAKGVYW+SAHICSSMGPSIRLNIREMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEANKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]
BLAST of Chy1G018290 vs. ExPASy TrEMBL
Match: A0A6J1DG73 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020212 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 332/360 (92.22%), Postives = 342/360 (95.00%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATC+PT  SS TMAHTSSVHPQD  SLLSFRP+AASSTA IFSLCHPL +QRRGGRS
Sbjct: 1   MAMATCSPTARSSLTMAHTSSVHPQDIPSLLSFRPMAASSTATIFSLCHPLTVQRRGGRS 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVDL F RE RDHLVVAALAAEIEV E VEENGEEG  G ATSV+PK+K+GKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGVAGLATSVVPKLKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ SSTKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLL+A+KSVEVNKPTGAKGVYW+SAHICSSMGPSIRLNIREMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAVKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]
BLAST of Chy1G018290 vs. ExPASy TrEMBL
Match: A0A6J1KV03 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111497839 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.7e-175
Identity = 324/360 (90.00%), Postives = 333/360 (92.50%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATC P +HSS TMAHTSSVHP D  SLLSFRPIAASSTA I SL HP IL+ RGG+ 
Sbjct: 1   MAMATCCPAVHSSLTMAHTSSVHPLDLPSLLSFRPIAASSTAKILSLSHPFILRSRGGKP 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVD  F RE RDHLVVAALAAEIEV E VEENGEE +  TAT ++PKIKKGKAALPLK
Sbjct: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEAS--TATLIVPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ  STKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVEVNKPTGAKGVYW+SAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 358

[Close]
BLAST of Chy1G018290 vs. ExPASy TrEMBL
Match: A0A6J1H7Q8 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111461210 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.5e-174
Identity = 324/360 (90.00%), Postives = 333/360 (92.50%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATC PT+HSS TMAHT SVHPQD  SLLSFRPIAA STA IF   HPLI++ RG + 
Sbjct: 1   MAMATCCPTVHSSLTMAHTCSVHPQDLPSLLSFRPIAAPSTAKIF---HPLIVRSRGRKP 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVD  F RE RDHLVVAALAAEIEV E VEENGEEGN  TAT ++PKIKKGKAALPLK
Sbjct: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGN--TATLIVPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ  STKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVEVNKPTGAKGVYW+SAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355

[Close]
BLAST of Chy1G018290 vs. NCBI nr
Match: XP_004135947.2 (50S ribosomal protein L1, chloroplastic [Cucumis sativus] >KAE8646386.1 hypothetical protein Csa_016834 [Cucumis sativus])

HSP 1 Score: 696 bits (1796), Expect = 2.66e-252
Identity = 356/360 (98.89%), Postives = 357/360 (99.17%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATCNPTLHSS TMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS
Sbjct: 1   MAMATCNPTLHSSLTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK
Sbjct: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLLSAIKSVEVNKPTGAKGVYW+SAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 360

[Close]
BLAST of Chy1G018290 vs. NCBI nr
Match: KAA0058588.1 (50S ribosomal protein L1 [Cucumis melo var. makuwa] >TYK10388.1 50S ribosomal protein L1 [Cucumis melo var. makuwa])

HSP 1 Score: 686 bits (1770), Expect = 2.44e-248
Identity = 351/360 (97.50%), Postives = 353/360 (98.06%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATCNPT+HSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS
Sbjct: 1   MAMATCNPTVHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
            NWVDLKFGRECRDHLVVAALAAEIEV E VEENGEEGNGGTATS LPKIKKGKAALPLK
Sbjct: 61  TNWVDLKFGRECRDHLVVAALAAEIEVAEVVEENGEEGNGGTATSALPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKF ETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFAETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLLSAIKSVE NKPTGAKGVYW+SAHICSSMGPSIRLNIREMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEANKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]
BLAST of Chy1G018290 vs. NCBI nr
Match: XP_038897614.1 (50S ribosomal protein L1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 658 bits (1697), Expect = 2.91e-237
Identity = 340/360 (94.44%), Postives = 347/360 (96.39%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATCNPT+HSS TMAHTSSVHPQD SSL   RPIA SSTANIFSLCHPLILQRRGGRS
Sbjct: 1   MAMATCNPTVHSSLTMAHTSSVHPQDLSSL---RPIAVSSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVDL F RE RDHLVVAALAAEIEV E VEENGEEGNGG+ATS+LPKIK+GKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSILPKIKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTS TKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSITKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVEVNKPTGAKGVYW+SAHICSSMGPSIRLNIR+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 357

[Close]
BLAST of Chy1G018290 vs. NCBI nr
Match: XP_022152504.1 (50S ribosomal protein L1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 644 bits (1662), Expect = 7.01e-232
Identity = 332/360 (92.22%), Postives = 342/360 (95.00%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATC+PT  SS TMAHTSSVHPQD  SLLSFRP+AASSTA IFSLCHPL +QRRGGRS
Sbjct: 1   MAMATCSPTARSSLTMAHTSSVHPQDIPSLLSFRPMAASSTATIFSLCHPLTVQRRGGRS 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVDL F RE RDHLVVAALAAEIEV E VEENGEEG  G ATSV+PK+K+GKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGVAGLATSVVPKLKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ SSTKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLL+A+KSVEVNKPTGAKGVYW+SAHICSSMGPSIRLNIREMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAVKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]
BLAST of Chy1G018290 vs. NCBI nr
Match: XP_023004585.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 621 bits (1601), Expect = 1.28e-222
Identity = 324/360 (90.00%), Postives = 333/360 (92.50%), Query Frame = 0 

Query: 1   MAMATCNPTLHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60
           MAMATC P +HSS TMAHTSSVHP D  SLLSFRPIAASSTA I SL HP IL+ RGG+ 
Sbjct: 1   MAMATCCPAVHSSLTMAHTSSVHPLDLPSLLSFRPIAASSTAKILSLSHPFILRSRGGKP 60

Query: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120
           INWVD  F RE RDHLVVAALAAEIEV E VEENGEE +  TAT ++PKIKKGKAALPLK
Sbjct: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEAS--TATLIVPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ  STKFVETAEAH RLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVEVNKPTGAKGVYW+SAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 358

[Close]
BLAST of Chy1G018290 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 439.1 bits (1128), Expect = 3.4e-123
Identity = 248/363 (68.32%), Postives = 284/363 (78.24%), Query Frame = 0 

Query: 3   MATCNPTLHSSFTMAH-TSSVHPQD---PSSLLSFRPIAASSTANIFSLCHPLILQRRGG 62
           MA C    HSS  +A+  +S   QD     SL SF    ASS  N   L  PL+L    G
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSF----ASSRPN--HLSFPLLLL---G 60

Query: 63  RSINWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVL--PKIKKGKAA 122
            S +       R      +V+A+AA  E D D EE+ E+    TAT+VL  PK KKGKAA
Sbjct: 61  GSRDRRCAAIDRASNHKFIVSAVAA--EADLDTEEDLEQ----TATAVLDPPKPKKGKAA 120

Query: 123 LPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYN 182
           L LKRDRTRSKRFLEIQKLRETK EYD+ TAISLLKQT++T+FVE+ EAH RLNIDPKYN
Sbjct: 121 LVLKRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYN 180

Query: 183 DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 242
           DQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLI
Sbjct: 181 DQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLI 240

Query: 243 ASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPF 302
           ASPDMM KVA LGK+LGPRGLMPNPKAGTVT NIPQAI EFK+GKVE+RADKTGIVH+PF
Sbjct: 241 ASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPF 300

Query: 303 GKADFSEDDLLVNLLSAIKSVEVNKPTGAKGVYWRSAHICSSMGPSIRLNIREMLDYKIP 360
           GK +F+E+DLL+N L+A+KSVE NKP GAKGVYW+SAHICSSMGPSI+LNIREM+D+K P
Sbjct: 301 GKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPP 346

[Close]
BLAST of Chy1G018290 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 298.5 bits (763), Expect = 7.2e-81
Identity = 188/302 (62.25%), Postives = 214/302 (70.86%), Query Frame = 0 

Query: 3   MATCNPTLHSSFTMAH-TSSVHPQD---PSSLLSFRPIAASSTANIFSLCHPLILQRRGG 62
           MA C    HSS  +A+  +S   QD     SL SF    ASS  N   L  PL+L    G
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSF----ASSRPN--HLSFPLLLL---G 60

Query: 63  RSINWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVL--PKIKKGKAA 122
            S +       R      +V+A+AA  E D D EE+ E+    TAT+VL  PK KKGKAA
Sbjct: 61  GSRDRRCAAIDRASNHKFIVSAVAA--EADLDTEEDLEQ----TATAVLDPPKPKKGKAA 120

Query: 123 LPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYN 182
           L LKRDRTRSKRFLEIQKLRETK EYD+ TAISLLKQT++T+FVE+ EAH RLNIDPKYN
Sbjct: 121 LVLKRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYN 180

Query: 183 DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 242
           DQQLRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLI
Sbjct: 181 DQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLI 240

Query: 243 ASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPF 299
           ASPDMM KVA LGK+LGPRGLMPNPKAGTVT NIPQ+    ++GK+     K G+     
Sbjct: 241 ASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQS---SRRGKLNSEQTKLGLFTFHL 282

[Close]
BLAST of Chy1G018290 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-40
Identity = 86/215 (40.00%), Postives = 135/215 (62.79%), Query Frame = 0 

Query: 142 YDLKTAISLLKQTSSTKFVETAEAHLRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ 201
           +DL  AI  +K  +  KF ET EAH+RL I+   ++  +R T+ LP    + VKVA   +
Sbjct: 188 FDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKDVKVAFFAE 247

Query: 202 GEKFDEAKNAGADLVGGEDLIEQI-KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPN 261
           G   ++AK AGAD+VGG +LIE+I K G ++FD+ +A+P MMP+V  + ++L   GLMPN
Sbjct: 248 GADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRILNNHGLMPN 307

Query: 262 PKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLVNLLSAIKSVEVN 321
           PK G+VT ++ +A+ + K G  ++R DKT I+H+P GK  FSE+ L  N+ + + ++ + 
Sbjct: 308 PKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLA 367

Query: 322 KPTGAKGV-----YWRSAHICSSMGPSIRLNIREM 351
           KP G K       Y  + H+CS+MG    ++I+ +
Sbjct: 368 KPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSL 402

The following BLAST results are available for this feature:
BLAST of Chy1G018290 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LE953.9e-12467.7850S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=... [more]
Q9LY664.8e-12268.3250S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 ... [more]
Q3MA181.5e-7560.8750S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937)... [more]
B0JNQ52.0e-7561.3050S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 G... [more]
P492083.4e-7585.7150S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=R... [more]
BLAST of Chy1G018290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8866.1e-19798.33Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_7G420870 PE=3 SV=1[more]
A0A5D3CGN74.4e-19597.50Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00... [more]
A0A6J1DG731.5e-18292.22Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020212 PE=3 SV=1[more]
A0A6J1KV031.7e-17590.00Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111497839 PE=3 SV=1[more]
A0A6J1H7Q81.5e-17490.00Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111461210 PE=3 SV=1[more]
BLAST of Chy1G018290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135947.22.66e-25298.8950S ribosomal protein L1, chloroplastic [Cucumis sativus] >KAE8646386.1 hypothet... [more]
KAA0058588.12.44e-24897.5050S ribosomal protein L1 [Cucumis melo var. makuwa] >TYK10388.1 50S ribosomal pr... [more]
XP_038897614.12.91e-23794.4450S ribosomal protein L1, chloroplastic-like [Benincasa hispida][more]
XP_022152504.17.01e-23292.2250S ribosomal protein L1, chloroplastic-like [Momordica charantia][more]
XP_023004585.11.28e-22290.0050S ribosomal protein L1, chloroplastic-like [Cucurbita maxima][more]
BLAST of Chy1G018290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63490.13.4e-12368.32Ribosomal protein L1p/L10e family [more]
AT3G63490.27.2e-8162.25Ribosomal protein L1p/L10e family [more]
AT2G42710.11.2e-4040.00Ribosomal protein L1p/L10e family [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.190.20coord: 142..345
e-value: 4.8E-82
score: 276.4
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 139..352
NoneNo IPR availablePANTHERPTHR23105:SF110MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGEcoord: 139..352
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 189..280
e-value: 4.8E-82
score: 276.4
IPR005878Ribosomal protein L1, bacterial-typeTIGRFAMTIGR01169TIGR01169coord: 125..349
e-value: 1.7E-92
score: 306.9
IPR005878Ribosomal protein L1, bacterial-typeHAMAPMF_01318_BRibosomal_L1_Bcoord: 120..350
score: 39.290241
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 151..341
e-value: 1.4E-47
score: 162.1
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 144..345
e-value: 3.94401E-73
score: 223.985
IPR023673Ribosomal protein L1, conserved sitePROSITEPS01199RIBOSOMAL_L1coord: 242..260
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 128..347

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G018290.1Chy1G018290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016020 membrane
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding