Chy1G017560 (gene) Cucumber (hystrix) v1

Overview
NameChy1G017560
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptioncytochrome c oxidase subunit 5C-like
LocationchrH01: 23267679 .. 23269976 (-)
RNA-Seq ExpressionChy1G017560
SyntenyChy1G017560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGATAAAATAGAGGAAGGAAAAGGCTTTCTCTCAAATAATGAAGCTTTAGAAGAACGAGGTTTGTCCAAACAAAGTGTATTAAATAATGTTAACGTACAATAAAGACAAGACACCTTAACACCATTTCAAATATTTACTAAACATATATTATTATAATTCAAAAAATATAATATCCAATGCAATGTCATAAAACATCTCAATGAGTCATTTGAAATGATTATATTCTTTCTAAAAAAAACTTGATCTCAAGTTATTATCTAGAAAAAAATTCAAAAATTCTCCGGTTGTATTAAATTAAATTTAAAGTAAGTTTAGTCTAATCGTAATTGACTATACCTTCCTTCCTAAAGTTTATTGGTTATATTCTTCATCCCATCAATTTATTGTATTAAAAAACTTTCAACTTTTTATGTTGTTAAATTGCAACATCTAAATATTCTGCGTACAGTTTTTATTGTCATCGTTTATTGTCATCACTCGATGATGTTTTCTTTATTCCAATTTAATGATTTCCACTCTTAACTTCCATTTTATTTTAAAAAGTACAAAAGAAAAACTTATTTTTCATATATATATATTTAGACTAAATAAACGGAAGCTTGACGTGTTCAAGTGGGCCCACTCGCTTGCTCCCAATCGGCAAGCGAAAATTGAGAGTCTTAAAAGAGAGTTTGGACGCAGCAGACCATAAACAAAGTTTCTAGGCGCCATCCCATCGCTTCTCATCTCCTCCGGTATAAACCCTAACTTTTCTTCTAGATCCACCCTTCTCTTTTATTTACCCATCTTTCTCTCTGCTTTCCTTGTCCTTAATCTTTGGTTTTTTTTTTTTTTTTTTTTTCGTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTATTTCGTCGTTTAATTTCATCTAATTTTGGGTATGTTGAATCTATGCCGTTCATGTATTTCTCTTTATTTGTTGAAATGAGGATTCGTATTCTTTTCGATTTGGATTTCTTGTATCTGAATTTGATTTGGGGTTGGTGTAAGGATTGGTTTTTGTTTTGGGCTTTGCCCCCTTTTTTTGGGCAAAACCTAGTTTCGATTTTCCTTGGGTATAGATTTTGAGAGACTGCGATTGTATGCTGATTTGTTTGAATGGATGTCTCGGGTTTTGATGTGTTGACTTAGTGGCAGATTTTTTTTTTTTTTTTTTTTTTGGATACTTTGGAGTTTTTCGAATGGATTAATCGCTCCCCTTTGGTAACCGATTTATGCATTTTAGGTGAGTGGAAGCCTATCCTAGGGTTCGTTGTCATGTGTGTTTTTCTTAACGTAGAGAAATGCAGTGTTGTTGGAATAGAGGAAATACAATACAACATAGGAGGGGTGGATGAGAAATTCAACCATAACAGCAAGAGGCTAGACTAGTAGATTCTCAGGGGATTCTTTGTAGTATCAACAAAGTTAGTACAGAATGTTGTTGAATAAGATGGCCAGCCATCATCCATTCTCTCGATCGAGTTTCTGTGATAGATTACATTGTTTGATGGTGGAGAAAGTTTTGTCTCATCTCCTTTTCAAGGATAAGAGAGGCGTCTTGTCTTGTGGATGATGCTCTTTTGAGCTATTTTGTAGTGCATTTGACTTAAGGGAACAGAATGAACATGAAGGGGTGATTATAACTTGGGAGGAGGTTAGATCTTTAGGGAGGTCCAAACCTCCTCCCTTTGGTTGTGTGTAACTAGAAAATTTTTTTATTATTTTTTATTTTGTACCATTGGACCCCTTTTTCTGTAGAGGCTTTTGACTTTTTCCTTTACTCCCTTCGACTTGGGCTGATTTATTTTTTGTATTGCAAGTAAAATAATAATAATAACTACAAATGAACGACAAAGTTTTGTTACTGAAGTAGTGGGGGGCAGCATTATTTCTTCTTAAATGATGAAGGTTTTCGTTGAACCTTCCATTTGTCCTTGCAACTAGTTCTGAACTATGTTGTTGCAAGTACTTCTTAATGGATGGAAGTAGAAAATATTATGTGTGTAAATGTCTTCTTGTTCTTATGAGTGTTTTTCTTCAATCACCTTGGGCAGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAG

mRNA sequence

ATGGGGGATAAAATAGAGGAAGGAAAAGGCTTTCTCTCAAATAATGAAGCTTTAGAAGAACGAGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAG

Coding sequence (CDS)

ATGGGGGATAAAATAGAGGAAGGAAAAGGCTTTCTCTCAAATAATGAAGCTTTAGAAGAACGAGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAG

Protein sequence

MGDKIEEGKGFLSNNEALEERDFLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVVVDEE*
Homology
[Close]
BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q42841 (Cytochrome c oxidase subunit 5C OS=Hordeum vulgare OX=4513 GN=COX5C PE=3 SV=3)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-21
Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA GRVAH TL+GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+ISVV
Sbjct: 1  MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 93 VDE 96
          V+E
Sbjct: 61 VEE 63

[Close]
BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q8VY39 (Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus OX=4232 GN=COX5C2 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-21
Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          M  GRVAH  L+GPSVVKE++ G  L L AG  WKMH WNEQRK RAFYDLLEKGEISVV
Sbjct: 1  MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q9SXX7 (Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica OX=39947 GN=COX5C PE=3 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 6.4e-21
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA GR+AH TL+GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+ISVV
Sbjct: 1  MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 93 VDE 96
          V+E
Sbjct: 61 VEE 63

[Close]
BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: O22912 (Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At2g47380 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  +VAH TL+GPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEISVV
Sbjct: 1  MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 93 VDEE 97
            EE
Sbjct: 61 AAEE 64

[Close]
BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q9FLK2 (Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana OX=3702 GN=At5g61310 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-19
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]
BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A1S3BRM0 (cytochrome c oxidase subunit 5C-like OS=Cucumis melo OX=3656 GN=LOC103492755 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A5D3D2T3 (Cytochrome c oxidase subunit Vc OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001720 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A0A0KB82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407690 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A6J1L0D4 (cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111497928 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTL+GPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A6J1JM28 (cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111488116 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTL+GPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILIGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. NCBI nr
Match: KAE8646364.1 (hypothetical protein Csa_016441 [Cucumis sativus])

HSP 1 Score: 152 bits (383), Expect = 2.08e-45
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 23  FLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYD 82
           FLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYD
Sbjct: 38  FLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYD 97

Query: 83  LLEKGEISVVVDEE 96
           LLEKGEISVVVDEE
Sbjct: 98  LLEKGEISVVVDEE 111

[Close]
BLAST of Chy1G017560 vs. NCBI nr
Match: KAG6593239.1 (putative cytochrome c oxidase subunit 5C-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141 bits (355), Expect = 1.61e-40
Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 22  DFLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFY 81
           DF TVF++EKQMAAG+VAHVTL+GPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFY
Sbjct: 84  DFRTVFEQEKQMAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFY 143

Query: 82  DLLEKGEISVVVDEE 96
           DLLEKGEI VVVDEE
Sbjct: 144 DLLEKGEIGVVVDEE 158

[Close]
BLAST of Chy1G017560 vs. NCBI nr
Match: XP_004135996.1 (cytochrome c oxidase subunit 5C [Cucumis sativus] >XP_008451480.1 PREDICTED: cytochrome c oxidase subunit 5C-like [Cucumis melo] >XP_016901077.1 PREDICTED: cytochrome c oxidase subunit 5C-like [Cucumis melo] >KAA0046696.1 Cytochrome c oxidase subunit Vc [Cucumis melo var. makuwa] >TYK18232.1 Cytochrome c oxidase subunit Vc [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (333), Expect = 2.19e-38
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 96
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. NCBI nr
Match: XP_038897009.1 (cytochrome c oxidase subunit 5C-like [Benincasa hispida])

HSP 1 Score: 129 bits (325), Expect = 3.64e-37
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTL+GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 93 VDEE 96
          VDEE
Sbjct: 61 VDEE 64

[Close]
BLAST of Chy1G017560 vs. NCBI nr
Match: KAG6575770.1 (Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132 bits (333), Expect = 6.15e-37
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0 

Query: 29  REKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGE 88
           +EK+MAAGRVAHVTLQGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGE
Sbjct: 110 KEKKMAAGRVAHVTLQGPSVVKEILIGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGE 169

Query: 89  ISVVVDEE 96
           I VVVDEE
Sbjct: 170 IGVVVDEE 177

[Close]
BLAST of Chy1G017560 vs. TAIR 10
Match: AT2G47380.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-20
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  +VAH TL+GPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEISVV
Sbjct: 1  MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 93 VDEE 97
            EE
Sbjct: 61 AAEE 64

[Close]
BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]
BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.2 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]
BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.3 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]
BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.4 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

The following BLAST results are available for this feature:
BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q428413.7e-2173.02Cytochrome c oxidase subunit 5C OS=Hordeum vulgare OX=4513 GN=COX5C PE=3 SV=3[more]
Q8VY393.7e-2175.00Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus OX=4232 GN=COX5C2 PE=3 SV... [more]
Q9SXX76.4e-2171.43Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica OX=39947 GN=COX5... [more]
O229121.6e-1968.75Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
Q9FLK22.0e-1967.19Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana OX=3702 GN=At... [more]
BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BRM07.3e-28100.00cytochrome c oxidase subunit 5C-like OS=Cucumis melo OX=3656 GN=LOC103492755 PE=... [more]
A0A5D3D2T37.3e-28100.00Cytochrome c oxidase subunit Vc OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A0A0KB827.3e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407690 PE=3 SV=1[more]
A0A6J1L0D46.8e-2693.75cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111497928... [more]
A0A6J1JM286.8e-2693.75cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111488116... [more]
BLAST of Chy1G017560 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646364.12.08e-45100.00hypothetical protein Csa_016441 [Cucumis sativus][more]
KAG6593239.11.61e-4089.33putative cytochrome c oxidase subunit 5C-3, partial [Cucurbita argyrosperma subs... [more]
XP_004135996.12.19e-38100.00cytochrome c oxidase subunit 5C [Cucumis sativus] >XP_008451480.1 PREDICTED: cyt... [more]
XP_038897009.13.64e-3796.88cytochrome c oxidase subunit 5C-like [Benincasa hispida][more]
KAG6575770.16.15e-3792.65Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argy... [more]
BLAST of Chy1G017560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G47380.11.1e-2068.75Cytochrome c oxidase subunit Vc family protein [more]
AT5G61310.11.5e-2067.19Cytochrome c oxidase subunit Vc family protein [more]
AT5G61310.21.5e-2067.19Cytochrome c oxidase subunit Vc family protein [more]
AT5G61310.31.5e-2067.19Cytochrome c oxidase subunit Vc family protein [more]
AT5G61310.41.5e-2067.19Cytochrome c oxidase subunit Vc family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008432Cytochrome c oxidase subunit 5cPANTHERPTHR34372CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATEDcoord: 16..96
NoneNo IPR availablePANTHERPTHR34372:SF2CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATEDcoord: 16..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G017560.1Chy1G017560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005746 mitochondrial respirasome