Chy1G017560 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G017560
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	cytochrome c oxidase subunit 5C-like
Location	chrH01: 23267679 .. 23269976 (-)
RNA-Seq Expression	Chy1G017560
Synteny	Chy1G017560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATAAAATAGAGGAAGGAAAAGGCTTTCTCTCAAATAATGAAGCTTTAGAAGAACGAGGTTTGTCCAAACAAAGTGTATTAAATAATGTTAACGTACAATAAAGACAAGACACCTTAACACCATTTCAAATATTTACTAAACATATATTATTATAATTCAAAAAATATAATATCCAATGCAATGTCATAAAACATCTCAATGAGTCATTTGAAATGATTATATTCTTTCTAAAAAAAACTTGATCTCAAGTTATTATCTAGAAAAAAATTCAAAAATTCTCCGGTTGTATTAAATTAAATTTAAAGTAAGTTTAGTCTAATCGTAATTGACTATACCTTCCTTCCTAAAGTTTATTGGTTATATTCTTCATCCCATCAATTTATTGTATTAAAAAACTTTCAACTTTTTATGTTGTTAAATTGCAACATCTAAATATTCTGCGTACAGTTTTTATTGTCATCGTTTATTGTCATCACTCGATGATGTTTTCTTTATTCCAATTTAATGATTTCCACTCTTAACTTCCATTTTATTTTAAAAAGTACAAAAGAAAAACTTATTTTTCATATATATATATTTAGACTAAATAAACGGAAGCTTGACGTGTTCAAGTGGGCCCACTCGCTTGCTCCCAATCGGCAAGCGAAAATTGAGAGTCTTAAAAGAGAGTTTGGACGCAGCAGACCATAAACAAAGTTTCTAGGCGCCATCCCATCGCTTCTCATCTCCTCCGGTATAAACCCTAACTTTTCTTCTAGATCCACCCTTCTCTTTTATTTACCCATCTTTCTCTCTGCTTTCCTTGTCCTTAATCTTTGGTTTTTTTTTTTTTTTTTTTTTCGTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTATTTCGTCGTTTAATTTCATCTAATTTTGGGTATGTTGAATCTATGCCGTTCATGTATTTCTCTTTATTTGTTGAAATGAGGATTCGTATTCTTTTCGATTTGGATTTCTTGTATCTGAATTTGATTTGGGGTTGGTGTAAGGATTGGTTTTTGTTTTGGGCTTTGCCCCCTTTTTTTGGGCAAAACCTAGTTTCGATTTTCCTTGGGTATAGATTTTGAGAGACTGCGATTGTATGCTGATTTGTTTGAATGGATGTCTCGGGTTTTGATGTGTTGACTTAGTGGCAGATTTTTTTTTTTTTTTTTTTTTTGGATACTTTGGAGTTTTTCGAATGGATTAATCGCTCCCCTTTGGTAACCGATTTATGCATTTTAGGTGAGTGGAAGCCTATCCTAGGGTTCGTTGTCATGTGTGTTTTTCTTAACGTAGAGAAATGCAGTGTTGTTGGAATAGAGGAAATACAATACAACATAGGAGGGGTGGATGAGAAATTCAACCATAACAGCAAGAGGCTAGACTAGTAGATTCTCAGGGGATTCTTTGTAGTATCAACAAAGTTAGTACAGAATGTTGTTGAATAAGATGGCCAGCCATCATCCATTCTCTCGATCGAGTTTCTGTGATAGATTACATTGTTTGATGGTGGAGAAAGTTTTGTCTCATCTCCTTTTCAAGGATAAGAGAGGCGTCTTGTCTTGTGGATGATGCTCTTTTGAGCTATTTTGTAGTGCATTTGACTTAAGGGAACAGAATGAACATGAAGGGGTGATTATAACTTGGGAGGAGGTTAGATCTTTAGGGAGGTCCAAACCTCCTCCCTTTGGTTGTGTGTAACTAGAAAATTTTTTTATTATTTTTTATTTTGTACCATTGGACCCCTTTTTCTGTAGAGGCTTTTGACTTTTTCCTTTACTCCCTTCGACTTGGGCTGATTTATTTTTTGTATTGCAAGTAAAATAATAATAATAACTACAAATGAACGACAAAGTTTTGTTACTGAAGTAGTGGGGGGCAGCATTATTTCTTCTTAAATGATGAAGGTTTTCGTTGAACCTTCCATTTGTCCTTGCAACTAGTTCTGAACTATGTTGTTGCAAGTACTTCTTAATGGATGGAAGTAGAAAATATTATGTGTGTAAATGTCTTCTTGTTCTTATGAGTGTTTTTCTTCAATCACCTTGGGCAGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAG

mRNA sequence

ATGGGGGATAAAATAGAGGAAGGAAAAGGCTTTCTCTCAAATAATGAAGCTTTAGAAGAACGAGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAG

Coding sequence (CDS)

ATGGGGGATAAAATAGAGGAAGGAAAAGGCTTTCTCTCAAATAATGAAGCTTTAGAAGAACGAGATTTTCTTACCGTTTTCAAACGTGAAAAGCAAATGGCTGCAGGCAGGGTGGCTCATGTCACACTACAAGGACCGAGTGTTGTCAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATTTACTGGAGAAGGGTGAGATCAGTGTCGTTGTTGATGAAGAATAG

Protein sequence

MGDKIEEGKGFLSNNEALEERDFLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVVVDEE*

Homology

[Close]

BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q42841 (Cytochrome c oxidase subunit 5C OS=Hordeum vulgare OX=4513 GN=COX5C PE=3 SV=3)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-21
Identity = 46/63 (73.02%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA GRVAH TL+GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+ISVV
Sbjct: 1  MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 93 VDE 96
          V+E
Sbjct: 61 VEE 63

[Close]

BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q8VY39 (Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus OX=4232 GN=COX5C2 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-21
Identity = 48/64 (75.00%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          M  GRVAH  L+GPSVVKE++ G  L L AG  WKMH WNEQRK RAFYDLLEKGEISVV
Sbjct: 1  MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q9SXX7 (Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica OX=39947 GN=COX5C PE=3 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 6.4e-21
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA GR+AH TL+GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+ISVV
Sbjct: 1  MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60

Query: 93 VDE 96
          V+E
Sbjct: 61 VEE 63

[Close]

BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: O22912 (Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At2g47380 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  +VAH TL+GPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEISVV
Sbjct: 1  MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 93 VDEE 97
            EE
Sbjct: 61 AAEE 64

[Close]

BLAST of Chy1G017560 vs. ExPASy Swiss-Prot
Match: Q9FLK2 (Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana OX=3702 GN=At5g61310 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-19
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]

BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A1S3BRM0 (cytochrome c oxidase subunit 5C-like OS=Cucumis melo OX=3656 GN=LOC103492755 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A5D3D2T3 (Cytochrome c oxidase subunit Vc OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001720 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A0A0KB82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407690 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A6J1L0D4 (cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111497928 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTL+GPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. ExPASy TrEMBL
Match: A0A6J1JM28 (cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111488116 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTL+GPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILIGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 93 VDEE 97
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. NCBI nr
Match: KAE8646364.1 (hypothetical protein Csa_016441 [Cucumis sativus])

HSP 1 Score: 152 bits (383), Expect = 2.08e-45
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 23  FLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYD 82
           FLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYD
Sbjct: 38  FLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYD 97

Query: 83  LLEKGEISVVVDEE 96
           LLEKGEISVVVDEE
Sbjct: 98  LLEKGEISVVVDEE 111

[Close]

BLAST of Chy1G017560 vs. NCBI nr
Match: KAG6593239.1 (putative cytochrome c oxidase subunit 5C-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141 bits (355), Expect = 1.61e-40
Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 22  DFLTVFKREKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFY 81
           DF TVF++EKQMAAG+VAHVTL+GPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFY
Sbjct: 84  DFRTVFEQEKQMAAGKVAHVTLKGPSVVKEILTAMGVALFAGSFWKMHQWNEQRKVRAFY 143

Query: 82  DLLEKGEISVVVDEE 96
           DLLEKGEI VVVDEE
Sbjct: 144 DLLEKGEIGVVVDEE 158

[Close]

BLAST of Chy1G017560 vs. NCBI nr
Match: XP_004135996.1 (cytochrome c oxidase subunit 5C [Cucumis sativus] >XP_008451480.1 PREDICTED: cytochrome c oxidase subunit 5C-like [Cucumis melo] >XP_016901077.1 PREDICTED: cytochrome c oxidase subunit 5C-like [Cucumis melo] >KAA0046696.1 Cytochrome c oxidase subunit Vc [Cucumis melo var. makuwa] >TYK18232.1 Cytochrome c oxidase subunit Vc [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (333), Expect = 2.19e-38
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV
Sbjct: 1  MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 60

Query: 93 VDEE 96
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. NCBI nr
Match: XP_038897009.1 (cytochrome c oxidase subunit 5C-like [Benincasa hispida])

HSP 1 Score: 129 bits (325), Expect = 3.64e-37
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MAAGRVAHVTL+GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VV
Sbjct: 1  MAAGRVAHVTLKGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 60

Query: 93 VDEE 96
          VDEE
Sbjct: 61 VDEE 64

[Close]

BLAST of Chy1G017560 vs. NCBI nr
Match: KAG6575770.1 (Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132 bits (333), Expect = 6.15e-37
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 29  REKQMAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGE 88
           +EK+MAAGRVAHVTLQGPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGE
Sbjct: 110 KEKKMAAGRVAHVTLQGPSVVKEILIGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGE 169

Query: 89  ISVVVDEE 96
           I VVVDEE
Sbjct: 170 IGVVVDEE 177

[Close]

BLAST of Chy1G017560 vs. TAIR 10
Match: AT2G47380.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-20
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  +VAH TL+GPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEISVV
Sbjct: 1  MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 93 VDEE 97
            EE
Sbjct: 61 AAEE 64

[Close]

BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]

BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.2 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]

BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.3 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

[Close]

BLAST of Chy1G017560 vs. TAIR 10
Match: AT5G61310.4 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-20
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 33 MAAGRVAHVTLQGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEISVV 92
          MA  ++AH TL+GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV
Sbjct: 1  MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 93 VDEE 97
          V EE
Sbjct: 61 VTEE 64

The following BLAST results are available for this feature:

BLAST of Chy1G017560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42841	3.7e-21	73.02	Cytochrome c oxidase subunit 5C OS=Hordeum vulgare OX=4513 GN=COX5C PE=3 SV=3	[more]
Q8VY39	3.7e-21	75.00	Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus OX=4232 GN=COX5C2 PE=3 SV...	[more]
Q9SXX7	6.4e-21	71.43	Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica OX=39947 GN=COX5...	[more]
O22912	1.6e-19	68.75	Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q9FLK2	2.0e-19	67.19	Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of Chy1G017560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRM0	7.3e-28	100.00	cytochrome c oxidase subunit 5C-like OS=Cucumis melo OX=3656 GN=LOC103492755 PE=...	[more]
A0A5D3D2T3	7.3e-28	100.00	Cytochrome c oxidase subunit Vc OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KB82	7.3e-28	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407690 PE=3 SV=1	[more]
A0A6J1L0D4	6.8e-26	93.75	cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111497928...	[more]
A0A6J1JM28	6.8e-26	93.75	cytochrome c oxidase subunit 5C-like OS=Cucurbita maxima OX=3661 GN=LOC111488116...	[more]

BLAST of Chy1G017560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646364.1	2.08e-45	100.00	hypothetical protein Csa_016441 [Cucumis sativus]	[more]
KAG6593239.1	1.61e-40	89.33	putative cytochrome c oxidase subunit 5C-3, partial [Cucurbita argyrosperma subs...	[more]
XP_004135996.1	2.19e-38	100.00	cytochrome c oxidase subunit 5C [Cucumis sativus] >XP_008451480.1 PREDICTED: cyt...	[more]
XP_038897009.1	3.64e-37	96.88	cytochrome c oxidase subunit 5C-like [Benincasa hispida]	[more]
KAG6575770.1	6.15e-37	92.65	Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argy...	[more]

BLAST of Chy1G017560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47380.1	1.1e-20	68.75	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.1	1.5e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.2	1.5e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.3	1.5e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.4	1.5e-20	67.19	Cytochrome c oxidase subunit Vc family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008432	Cytochrome c oxidase subunit 5c	PANTHER	PTHR34372	CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED	coord: 16..96
None	No IPR available	PANTHER	PTHR34372:SF2	CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED	coord: 16..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G017560.1	Chy1G017560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005746	mitochondrial respirasome