Chy1G015630 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTCCAAGACCCTCCTCCCTTCCGCTTCTTTCAAACCTAACCTCTCCTCTTCATGTACTCACTCTTCCACTATTCCATCATCAATTCCCCAAACTTCCTCTACTAATCATCCTAATCCTATATTACCCGCTGCTTTCATCACAGAAGGATTTCGTTTCATCACCCTCTTTCATTGTTCCTACGCAATTGCAAGACTGGTAACATTACTGCAATTCGAGCATTTCATTTCTTTGACCTAATGTTGCGTTCATATCCTATCCCCCCCATTTCTTCTTTCAATCGTTTACTTGGTGGCCTTGCTAAGATTAACCATTGCTCTCAACTATTTTCTCACTATAATAAAACGCGCCTTGCTGGATCGGGTTAACGAAGGTCTTGCGGCCATGGCAGGGATTTTAAGGAGAGGTTATATTCCCAATAGTCACATATACGACCTTGATTGAGGGCTTGTGTATGGAGTATAGGATTAGTGAAGCCACGCGGTTATTTTTCAAAATGCAAAAATTAGGTTGTACGCCCGATGTGGTTACTTATAGGACTTTGATCAAGGGGCTATGCCAAACCGGAAATTTTAACATTGCACTTAAGTTGCTTTCAGCTCAATGACACTAGTCAATATGGGAATAATTGTAAGCCCGGTGTTATTACCCATAGTATCATCATAGATAGGCTTTGTAAGGTTGGACGTGAAGACGAGGCAAAAGAACATTTTGAGGAAATGAAAGCTCAGGAATGA ATGCCTTCCAAGACCCTCCTCCCTTCCGCTTCTTTCAAACCTAACCTCTCCTCTTCATGTACTCACTCTTCCACTATTCCATCATCAATTCCCCAAACTTCCTCTACTAATCATCCTAATCCTATATTACCCGCTGCTTTCATCACAGAAGGATTTCGTTTCATCACCCTCTTTCATTGTTCCTACGCAATTGCAAGACTGCTCAATGACACTAGTCAATATGGGAATAATTGTAAGCCCGGTGTTATTACCCATAGTATCATCATAGATAGGCTTTGTAAGGTTGGACGTGAAGACGAGGCAAAAGAACATTTTGAGGAAATGAAAGCTCAGGAATGA ATGCCTTCCAAGACCCTCCTCCCTTCCGCTTCTTTCAAACCTAACCTCTCCTCTTCATGTACTCACTCTTCCACTATTCCATCATCAATTCCCCAAACTTCCTCTACTAATCATCCTAATCCTATATTACCCGCTGCTTTCATCACAGAAGGATTTCGTTTCATCACCCTCTTTCATTGTTCCTACGCAATTGCAAGACTGCTCAATGACACTAGTCAATATGGGAATAATTGTAAGCCCGGTGTTATTACCCATAGTATCATCATAGATAGGCTTTGTAAGGTTGGACGTGAAGACGAGGCAAAAGAACATTTTGAGGAAATGAAAGCTCAGGAATGA MPSKTLLPSASFKPNLSSSCTHSSTIPSSIPQTSSTNHPNPILPAAFITEGFRFITLFHCSYAIARLLNDTSQYGNNCKPGVITHSIIIDRLCKVGREDEAKEHFEEMKAQE* Homology
BLAST of Chy1G015630 vs. ExPASy TrEMBL
Match: A0A0A0K5M0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387770 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13 Identity = 62/152 (40.79%), Postives = 71/152 (46.71%), Query Frame = 0
BLAST of Chy1G015630 vs. ExPASy TrEMBL
Match: A0A0A0K784 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380110 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13 Identity = 51/84 (60.71%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Chy1G015630 vs. ExPASy TrEMBL
Match: A0A5A7UUW8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00730 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.9e-12 Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Chy1G015630 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of Chy1G015630 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of Chy1G015630 vs. NCBI nr
Match: XP_031744845.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 104 bits (260), Expect = 8.34e-24 Identity = 67/111 (60.36%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of Chy1G015630 vs. NCBI nr
Match: XP_011659273.2 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sativus] >KAE8646303.1 hypothetical protein Csa_016074 [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 2.11e-20 Identity = 89/266 (33.46%), Postives = 93/266 (34.96%), Query Frame = 0
BLAST of Chy1G015630 vs. NCBI nr
Match: XP_011659291.1 (pentatricopeptide repeat-containing protein At1g62914, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 85.1 bits (209), Expect = 1.60e-16 Identity = 83/266 (31.20%), Postives = 92/266 (34.59%), Query Frame = 0
BLAST of Chy1G015630 vs. NCBI nr
Match: KGN45331.2 (hypothetical protein Csa_015776 [Cucumis sativus]) HSP 1 Score: 85.1 bits (209), Expect = 1.80e-16 Identity = 83/266 (31.20%), Postives = 92/266 (34.59%), Query Frame = 0
BLAST of Chy1G015630 vs. NCBI nr
Match: KAA0059713.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26151.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 5.30e-15 Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0
BLAST of Chy1G015630 vs. TAIR 10
Match: AT2G17140.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 7.6e-05 Identity = 25/60 (41.67%), Postives = 33/60 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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