Chy1G014720 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G014720
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	LOB domain-containing protein
Location	chrH01: 20462152 .. 20462925 (+)
RNA-Seq Expression	Chy1G014720
Synteny	Chy1G014720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCTCTTCTTCTTCTTCTCCTCCTCCATGTGGAGCTTGCAAATTTCTTAGAAGAAAGTGTGTCAATGGTTGCATCTTTGCTCCTTATTTCCGCCACGAGCTTGGCGCCTCTCACTTCTCCGCCATCCACAAAGTTTTTGGTGCGAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCTGTCTCCCACCGTTGCGAAGCGGCCGTGACCATCTCATATGAAGCTCAAGCGAGACTTCAAGATCCGATCTATGGTTGCGTTTCTCATATTATCGCTCTCCAACAACAGGTTTTCTAATAATAAAATTTACCATATAAACTCATATCGTCCAACTTGAAGTTTTAGATTCCATGATAATAAACTTTATCATAATTTTCAAAGAAAAGCAAAACGATCATACTTATTTGATCTCCTCAGCTTAAACTTTTGAGTTTATGTTGGTTTATTCGAAACCCTAATTTTCGAAATCGAGTTTGATGAGTATTTGAATGGTTGTGGAAATTGTAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCACAAATTCTTCTCAACAATTATACCACAAGAAACCCTACTGAATTACTTCATGAAAAGTCTCCATTTTGTTATTCCGATGACCCATTCTTAGATCTTCAAAGCTGGCTTCTGGCGGAGAGCTGCAGCGCCACCGCACCGGAGCTTGAACCTGCGGCGGTGCCGTACTTTGAGATGAGTGTCGTCGATTCAAAACTCGCCGGAGATTTCTGTTGCTAA

mRNA sequence

ATGGCAGCCTCTTCTTCTTCTTCTCCTCCTCCATGTGGAGCTTGCAAATTTCTTAGAAGAAAGTGTGTCAATGGTTGCATCTTTGCTCCTTATTTCCGCCACGAGCTTGGCGCCTCTCACTTCTCCGCCATCCACAAAGTTTTTGGTGCGAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCTGTCTCCCACCGTTGCGAAGCGGCCGTGACCATCTCATATGAAGCTCAAGCGAGACTTCAAGATCCGATCTATGGTTGCGTTTCTCATATTATCGCTCTCCAACAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCACAAATTCTTCTCAACAATTATACCACAAGAAACCCTACTGAATTACTTCATGAAAAGTCTCCATTTTGTTATTCCGATGACCCATTCTTAGATCTTCAAAGCTGGCTTCTGGCGGAGAGCTGCAGCGCCACCGCACCGGAGCTTGAACCTGCGGCGGTGCCGTACTTTGAGATGAGTGTCGTCGATTCAAAACTCGCCGGAGATTTCTGTTGCTAA

Coding sequence (CDS)

ATGGCAGCCTCTTCTTCTTCTTCTCCTCCTCCATGTGGAGCTTGCAAATTTCTTAGAAGAAAGTGTGTCAATGGTTGCATCTTTGCTCCTTATTTCCGCCACGAGCTTGGCGCCTCTCACTTCTCCGCCATCCACAAAGTTTTTGGTGCGAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCTGTCTCCCACCGTTGCGAAGCGGCCGTGACCATCTCATATGAAGCTCAAGCGAGACTTCAAGATCCGATCTATGGTTGCGTTTCTCATATTATCGCTCTCCAACAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCACAAATTCTTCTCAACAATTATACCACAAGAAACCCTACTGAATTACTTCATGAAAAGTCTCCATTTTGTTATTCCGATGACCCATTCTTAGATCTTCAAAGCTGGCTTCTGGCGGAGAGCTGCAGCGCCACCGCACCGGAGCTTGAACCTGCGGCGGTGCCGTACTTTGAGATGAGTGTCGTCGATTCAAAACTCGCCGGAGATTTCTGTTGCTAA

Protein sequence

MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAGDFCC*

Homology

[Close]

BLAST of Chy1G014720 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-48
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           M +SSSSS  PCGACKFLRRKC  GC+FAPYF HE GASHF+AIHKVFGASNASKLL+HL
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ--ILLN 120
           P+S RCEAA+TISYEAQARLQDPIYGCVSHI ALQQQV+NL+A++  L++QAAQ  I  +
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD 120

Query: 121 NYTTRNPTELLHEKSPFCYSDD 141
           + T+ NP     + +   Y  D
Sbjct: 121 SPTSENPNSYYGDTTKAPYHHD 142

[Close]

BLAST of Chy1G014720 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.6e-42
Identity = 83/104 (79.81%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 11  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAV 70
           PCGACKFLRRKCV GC+FAPYF HE GA+HF+AIHKVFGASN SKLLAHLP++ R EAAV
Sbjct: 7   PCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAAV 66

Query: 71  TISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ 115
           TISYEAQARL+DPIYGCV+HI ALQQQVM L+AQ+A L+  AAQ
Sbjct: 67  TISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

[Close]

BLAST of Chy1G014720 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.2e-40
Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 6   SSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHR 65
           + S  PCGACKFLRR+CV GC+FAPYF HE GASHF+AIH+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 66  CEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILL 118
            EAA TI YEAQAR QDPIYGCVSHI +LQQQV+NL+ Q+  L++QA Q ++
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

[Close]

BLAST of Chy1G014720 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 6.4e-38
Identity = 77/121 (63.64%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 3   ASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPV 62
           +S      PCGACKFLRRKCV GCIFAPYF  E G+++F+A+HKVFGASN SKLL H+PV
Sbjct: 29  SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPV 88

Query: 63  SHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYTT 122
             R +A VTI YEAQAR++DPIYGCV+HI ALQQQV+NL+A+V+YL+   A + L    T
Sbjct: 89  HRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELPQPQT 148

Query: 123 R 124
           R
Sbjct: 149 R 149

[Close]

BLAST of Chy1G014720 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-36
Identity = 72/104 (69.23%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 11  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAV 70
           PCG CKFLRRKCV GC+FAPYF +E G+S+F+AIHKVFGASN SKL++HLP   RC+A  
Sbjct: 7   PCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAVR 66

Query: 71  TISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ 115
           TISYEA +RL DPIYGCVS I +LQQQV++L+AQV  LRE+A++
Sbjct: 67  TISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR 110

[Close]

BLAST of Chy1G014720 vs. ExPASy TrEMBL
Match: A0A0A0K5D4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99
Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS PPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTELL+EKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG
Sbjct: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

[Close]

BLAST of Chy1G014720 vs. ExPASy TrEMBL
Match: A0A1S3BGZ5 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.7e-92
Identity = 172/184 (93.48%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRN TEL +EKSPF YSDDPFLDLQSWLL ESC+A APE EPAAVPYFEMSV+DSKLAG
Sbjct: 121 TTRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

[Close]

BLAST of Chy1G014720 vs. ExPASy TrEMBL
Match: A0A5D3D179 (LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003110 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.1e-92
Identity = 171/184 (92.93%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTEL +EKSP  YSDDPFLDLQSWLLAESC+  APE EPAA+PYFEMSVV+SKLAG
Sbjct: 121 TTRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

[Close]

BLAST of Chy1G014720 vs. ExPASy TrEMBL
Match: A0A6J1DSE8 (LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC111023473 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.4e-81
Identity = 154/184 (83.70%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAAS+SSS  PCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           T RNP ELL+ KSPF  S DP  DLQSWLLAE  SA APE EPAAVP+ EMS+ D  +AG
Sbjct: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180

Query: 181 DFCC 185
           D CC
Sbjct: 181 DCCC 182

[Close]

BLAST of Chy1G014720 vs. ExPASy TrEMBL
Match: A0A6J1KRG7 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111498009 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.7e-78
Identity = 148/183 (80.87%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 2   AASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61
           ++SSSSS PPCGACKFLRRKCVNGCIFAPYFRH+LGASHFSA+HKVFGASNASKLLAHLP
Sbjct: 4   SSSSSSSSPPCGACKFLRRKCVNGCIFAPYFRHDLGASHFSAVHKVFGASNASKLLAHLP 63

Query: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYT 121
           VSHR +AAVTISYEAQARLQDPIYGC+S I ALQ QVMNLRAQVAYLREQAAQILLN Y 
Sbjct: 64  VSHRSQAAVTISYEAQARLQDPIYGCISQIFALQHQVMNLRAQVAYLREQAAQILLNGYI 123

Query: 122 TRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAGD 181
           TRNP ELL+  S   YSD+  LDLQ+WLL ESCS  APE EP A PY EM + DS LAGD
Sbjct: 124 TRNPNELLYGNS-LSYSDEQLLDLQTWLLEESCSTAAPEFEPTAAPYVEMGIADSNLAGD 183

Query: 182 FCC 185
           FCC
Sbjct: 184 FCC 185

[Close]

BLAST of Chy1G014720 vs. NCBI nr
Match: XP_004150342.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical protein Csa_015971 [Cucumis sativus])

HSP 1 Score: 370 bits (950), Expect = 3.11e-129
Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS PPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTELL+EKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG
Sbjct: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180

Query: 181 DFCC 184
           DFCC
Sbjct: 181 DFCC 184

[Close]

BLAST of Chy1G014720 vs. NCBI nr
Match: XP_008447245.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 347 bits (890), Expect = 4.38e-120
Identity = 172/184 (93.48%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRN TEL +EKSPF YSDDPFLDLQSWLL ESC+A APE EPAAVPYFEMSV+DSKLAG
Sbjct: 121 TTRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKLAG 180

Query: 181 DFCC 184
           DFCC
Sbjct: 181 DFCC 184

[Close]

BLAST of Chy1G014720 vs. NCBI nr
Match: KAA0042058.1 (LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB domain-containing protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 346 bits (887), Expect = 1.26e-119
Identity = 171/184 (92.93%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTEL +EKSP  YSDDPFLDLQSWLLAESC+  APE EPAA+PYFEMSVV+SKLAG
Sbjct: 121 TTRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKLAG 180

Query: 181 DFCC 184
           DFCC
Sbjct: 181 DFCC 184

[Close]

BLAST of Chy1G014720 vs. NCBI nr
Match: XP_038896394.1 (LOB domain-containing protein 29-like [Benincasa hispida])

HSP 1 Score: 336 bits (861), Expect = 1.12e-115
Identity = 168/183 (91.80%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS PPCGACKFLRRKCVNGCIFAP+FRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSPPCGACKFLRRKCVNGCIFAPHFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRC+AAVTISYEAQARLQDPIYGCVSHI ALQQQVMNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCDAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNP EL +EKSPF YSDDP LDLQ+WLLAESCSA APE EPAAVPY EMSVVDS LAG
Sbjct: 121 TTRNPIELPYEKSPF-YSDDPLLDLQTWLLAESCSAAAPEFEPAAVPYVEMSVVDSNLAG 180

Query: 181 DFC 183
           +FC
Sbjct: 181 NFC 182

[Close]

BLAST of Chy1G014720 vs. NCBI nr
Match: XP_022156602.1 (LOB domain-containing protein 29-like [Momordica charantia])

HSP 1 Score: 309 bits (792), Expect = 6.86e-105
Identity = 154/184 (83.70%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAAS+SSS  PCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLHEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           T RNP ELL+ KSPF  S DP  DLQSWLLAE  SA APE EPAAVP+ EMS+ D  +AG
Sbjct: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180

Query: 181 DFCC 184
           D CC
Sbjct: 181 DCCC 182

[Close]

BLAST of Chy1G014720 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 1   MAASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           M +SSSSS  PCGACKFLRRKC  GC+FAPYF HE GASHF+AIHKVFGASNASKLL+HL
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ--ILLN 120
           P+S RCEAA+TISYEAQARLQDPIYGCVSHI ALQQQV+NL+A++  L++QAAQ  I  +
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD 120

Query: 121 NYTTRNPTELLHEKSPFCYSDD 141
           + T+ NP     + +   Y  D
Sbjct: 121 SPTSENPNSYYGDTTKAPYHHD 142

[Close]

BLAST of Chy1G014720 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 165.6 bits (418), Expect = 3.7e-41
Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 6   SSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHR 65
           + S  PCGACKFLRR+CV GC+FAPYF HE GASHF+AIH+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 66  CEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILL 118
            EAA TI YEAQAR QDPIYGCVSHI +LQQQV+NL+ Q+  L++QA Q ++
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

[Close]

BLAST of Chy1G014720 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 158.7 bits (400), Expect = 4.6e-39
Identity = 77/121 (63.64%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 3   ASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPV 62
           +S      PCGACKFLRRKCV GCIFAPYF  E G+++F+A+HKVFGASN SKLL H+PV
Sbjct: 29  SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPV 88

Query: 63  SHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYTT 122
             R +A VTI YEAQAR++DPIYGCV+HI ALQQQV+NL+A+V+YL+   A + L    T
Sbjct: 89  HRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELPQPQT 148

Query: 123 R 124
           R
Sbjct: 149 R 149

[Close]

BLAST of Chy1G014720 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-37
Identity = 72/104 (69.23%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 11  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAV 70
           PCG CKFLRRKCV GC+FAPYF +E G+S+F+AIHKVFGASN SKL++HLP   RC+A  
Sbjct: 7   PCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAVR 66

Query: 71  TISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ 115
           TISYEA +RL DPIYGCVS I +LQQQV++L+AQV  LRE+A++
Sbjct: 67  TISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR 110

[Close]

BLAST of Chy1G014720 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-37
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 2   AASSSSSPPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61
           ++SS     PCGACKFLRRKCV GCIFAPYF  E GA+HF+A+HKVFGASN SKLL H+P
Sbjct: 8   SSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVP 67

Query: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILL 118
              R +A V+I +EAQARL+DPIYGCVSHI++LQQQV++L+ +++YL+   A + L
Sbjct: 68  EHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLEL 123

The following BLAST results are available for this feature:

BLAST of Chy1G014720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2J7	1.8e-48	68.31	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q5UG13	9.6e-42	79.81	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9SLB6	5.2e-40	70.54	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
O22131	6.4e-38	63.64	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q9SJW5	3.5e-36	69.23	LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S...	[more]

BLAST of Chy1G014720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5D4	3.0e-99	98.91	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV...	[more]
A0A1S3BGZ5	2.7e-92	93.48	LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV...	[more]
A0A5D3D179	6.1e-92	92.93	LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1DSE8	6.4e-81	83.70	LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A6J1KRG7	1.7e-78	80.87	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11149800...	[more]

BLAST of Chy1G014720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150342.1	3.11e-129	98.91	LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical prot...	[more]
XP_008447245.1	4.38e-120	93.48	PREDICTED: LOB domain-containing protein 29 [Cucumis melo]	[more]
KAA0042058.1	1.26e-119	92.93	LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB doma...	[more]
XP_038896394.1	1.12e-115	91.80	LOB domain-containing protein 29-like [Benincasa hispida]	[more]
XP_022156602.1	6.86e-105	83.70	LOB domain-containing protein 29-like [Momordica charantia]	[more]

BLAST of Chy1G014720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58190.1	1.3e-49	68.31	lateral organ boundaries-domain 29	[more]
AT2G42440.1	3.7e-41	70.54	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G45420.1	4.6e-39	63.64	LOB domain-containing protein 18	[more]
AT2G31310.1	2.5e-37	69.23	LOB domain-containing protein 14	[more]
AT4G00220.1	5.6e-37	62.93	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..111
None	No IPR available	PANTHER	PTHR31529:SF26	LOB DOMAIN-CONTAINING PROTEIN 17-RELATED	coord: 9..128
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 9..128
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 11..108 e-value: 1.7E-34 score: 118.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 10..112 score: 21.478207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G014720.1	Chy1G014720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus