Chy1G014620 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G014620
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	AAI domain-containing protein
Location	chrH01: 20337956 .. 20338546 (-)
RNA-Seq Expression	Chy1G014620
Synteny	Chy1G014620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATGGCTCAAAAGGTGACCGTGATGGTGGTGGTGATATTGGTTGGCTTAGCAGGAATATCGATAGCAATGGAAATTTGCGGCGTCGACGAGGATGGTCTCACGGCATGCAAGCCGTGGGTAACGAAACCGTGCCCTGCCGAGATGCCACCGGCCGCTTGTTGCAATAAGCTCTCCAATGCTGACTTTGATTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATTCAGACCTTGCTCTTGCCTTGCCAGTCAAGTGCAACATTCCTAACACTCCCACTTGCTCTACTTAAACCTTAAGGAAAATAAATATTTATGAGGTTCGGATTTTTATCTTTTTGAAAATCTTCTTATTTATTCCGTAAAAAGTTGAAATTATAGGATTATTTTTGTCCTGTTTTGTTAAATATTTGGTTGTTTTTTATTTTTTAAATTTAGGTTTATATATGTGTGTATATATATATATGTTAGTATTTGTTTTAATTTGTGTGTTCTTGTTTGTGCAGTGTGTAAGTGAAAGTACAATGGGAGAAGACCATGATGTATGGGGCCTCACTTATGTTAATGTTTAA

mRNA sequence

ATGGAGATGGCTCAAAAGGTGACCGTGATGGTGGTGGTGATATTGGTTGGCTTAGCAGGAATATCGATAGCAATGGAAATTTGCGGCGTCGACGAGGATGGTCTCACGGCATGCAAGCCGTGGGTAACGAAACCGTGCCCTGCCGAGATGCCACCGGCCGCTTGTTGCAATAAGCTCTCCAATGCTGACTTTGATTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATTCAGACCTTGCTCTTGCCTTGCCATGTGTAAGTGAAAGTACAATGGGAGAAGACCATGATGTATGGGGCCTCACTTATGTTAATGTTTAA

Coding sequence (CDS)

ATGGAGATGGCTCAAAAGGTGACCGTGATGGTGGTGGTGATATTGGTTGGCTTAGCAGGAATATCGATAGCAATGGAAATTTGCGGCGTCGACGAGGATGGTCTCACGGCATGCAAGCCGTGGGTAACGAAACCGTGCCCTGCCGAGATGCCACCGGCCGCTTGTTGCAATAAGCTCTCCAATGCTGACTTTGATTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATTCAGACCTTGCTCTTGCCTTGCCATGTGTAAGTGAAAGTACAATGGGAGAAGACCATGATGTATGGGGCCTCACTTATGTTAATGTTTAA

Protein sequence

MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNADFDCFCKYKNSMLLSSFGIDSDLALALPCVSESTMGEDHDVWGLTYVNV*

Homology

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BLAST of Chy1G014620 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 4  AQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNAD 63
          A  V + ++VI+  L   S+A+++CG+ +D L  CKP V+K  P   P   CC  L +AD
Sbjct: 6  AAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTALQHAD 65

Query: 64 FDCFCKYKNSMLLSSFGIDSDLALALP 91
          F C C YKNS  L SFG+D +LA ALP
Sbjct: 66 FACLCGYKNSPWLGSFGVDPELASALP 91

[Close]

BLAST of Chy1G014620 vs. ExPASy TrEMBL
Match: A0A0A0K4Q7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60
          MEMAQKVTVMVV+ILVGLAGISIAME+CGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS
Sbjct: 1  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60

Query: 61 NADFDCFCKYKNSMLLSSFGIDSDLALALP 91
          NADFDCFCKYKNSMLLSSFGIDSDLALALP
Sbjct: 61 NADFDCFCKYKNSMLLSSFGIDSDLALALP 90

[Close]

BLAST of Chy1G014620 vs. ExPASy TrEMBL
Match: A0A5D3D158 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002300 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 79/90 (87.78%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 1  MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60
          MEMA KV +M VVILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1  MEMALKVKIMAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61 NADFDCFCKYKNSMLLSSFGIDSDLALALP 91
          NADF CFCKYKNSMLLSSFGID DLALALP
Sbjct: 61 NADFSCFCKYKNSMLLSSFGIDPDLALALP 90

[Close]

BLAST of Chy1G014620 vs. ExPASy TrEMBL
Match: A0A1S3BHS9 (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103489717 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.7e-36
Identity = 78/90 (86.67%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1  MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60
          MEMA KV +  VVILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1  MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61 NADFDCFCKYKNSMLLSSFGIDSDLALALP 91
          NADF CFCKYKNSMLLSSFGID DLALALP
Sbjct: 61 NADFSCFCKYKNSMLLSSFGIDPDLALALP 90

[Close]

BLAST of Chy1G014620 vs. ExPASy TrEMBL
Match: A0A6J1DS99 (putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023061 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 1  MEMAQKVTVM--VVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNK 60
          MEM + V  +   V +LV LAGIS A+ +CGVDEDGLTACKPWVTKPCP + PP ACCN 
Sbjct: 1  MEMTRTVAALAVAVAVLVSLAGISGAVNVCGVDEDGLTACKPWVTKPCPTDPPPVACCNG 60

Query: 61 LSNADFDCFCKYKNSMLLSSFGIDSDLALALP 91
          LS ADF CFC YKNS++L S GI+ +LALALP
Sbjct: 61 LSKADFGCFCNYKNSLVLPSLGIEPNLALALP 92

[Close]

BLAST of Chy1G014620 vs. ExPASy TrEMBL
Match: A0A6J1GPI5 (putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC111456291 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 9.6e-24
Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 4  AQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNAD 63
          A KV VMV+V  V LA +++A+++CGV++DGL ACKPWV KPCP E+PP ACC+ LS AD
Sbjct: 5  APKVVVMVMV--VSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPTACCDGLSKAD 64

Query: 64 FDCFCKYKNSMLLSSFGIDSDLALALP 91
            CFCKYK+SMLLSS GID DLAL LP
Sbjct: 65 LGCFCKYKHSMLLSSLGIDLDLALGLP 89

[Close]

BLAST of Chy1G014620 vs. NCBI nr
Match: KAE8646276.1 (hypothetical protein Csa_016013 [Cucumis sativus])

HSP 1 Score: 180 bits (457), Expect = 3.79e-56
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1   MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60
           MEMAQKVTVMVV+ILVGLAGISIAME+CGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS
Sbjct: 29  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 88

Query: 61  NADFDCFCKYKNSMLLSSFGIDSDLALALP 90
           NADFDCFCKYKNSMLLSSFGIDSDLALALP
Sbjct: 89  NADFDCFCKYKNSMLLSSFGIDSDLALALP 118

[Close]

BLAST of Chy1G014620 vs. NCBI nr
Match: KAA0041998.1 (putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa] >TYK17933.1 putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (415), Expect = 3.95e-50
Identity = 79/90 (87.78%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 1  MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60
          MEMA KV +M VVILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1  MEMALKVKIMAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61 NADFDCFCKYKNSMLLSSFGIDSDLALALP 90
          NADF CFCKYKNSMLLSSFGID DLALALP
Sbjct: 61 NADFSCFCKYKNSMLLSSFGIDPDLALALP 90

[Close]

BLAST of Chy1G014620 vs. NCBI nr
Match: XP_008447223.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo])

HSP 1 Score: 162 bits (409), Expect = 3.24e-49
Identity = 78/90 (86.67%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1  MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60
          MEMA KV +  VVILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1  MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 61 NADFDCFCKYKNSMLLSSFGIDSDLALALP 90
          NADF CFCKYKNSMLLSSFGID DLALALP
Sbjct: 61 NADFSCFCKYKNSMLLSSFGIDPDLALALP 90

[Close]

BLAST of Chy1G014620 vs. NCBI nr
Match: XP_022156089.1 (putative lipid-transfer protein DIR1 [Momordica charantia])

HSP 1 Score: 125 bits (315), Expect = 6.76e-35
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 1  MEMAQKVTVMVVVI--LVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNK 60
          MEM + V  + V +  LV LAGIS A+ +CGVDEDGLTACKPWVTKPCP + PP ACCN 
Sbjct: 1  MEMTRTVAALAVAVAVLVSLAGISGAVNVCGVDEDGLTACKPWVTKPCPTDPPPVACCNG 60

Query: 61 LSNADFDCFCKYKNSMLLSSFGIDSDLALALP 90
          LS ADF CFC YKNS++L S GI+ +LALALP
Sbjct: 61 LSKADFGCFCNYKNSLVLPSLGIEPNLALALP 92

[Close]

BLAST of Chy1G014620 vs. NCBI nr
Match: KAG6593049.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122 bits (306), Expect = 1.37e-33
Identity = 58/90 (64.44%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1  MEMAQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60
          M MA  +T   +V+LV L+G    M++CGV +DGLTACKPWVTKPCP E+PPAACC+ LS
Sbjct: 1  MTMAMAMT---MVMLVSLSGALAEMDVCGVSQDGLTACKPWVTKPCPTELPPAACCDGLS 60

Query: 61 NADFDCFCKYKNSMLLSSFGIDSDLALALP 90
           ADF CFC YK+S++L S GID DLALALP
Sbjct: 61 KADFGCFCNYKHSLVLPSLGIDPDLALALP 87

[Close]

BLAST of Chy1G014620 vs. TAIR 10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 4  AQKVTVMVVVILVGLAGISIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNAD 63
          A  V + ++VI+  L   S+A+++CG+ +D L  CKP V+K  P   P   CC  L +AD
Sbjct: 6  AAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTALQHAD 65

Query: 64 FDCFCKYKNSMLLSSFGIDSDLALALP 91
          F C C YKNS  L SFG+D +LA ALP
Sbjct: 66 FACLCGYKNSPWLGSFGVDPELASALP 91

[Close]

BLAST of Chy1G014620 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 2.9e-12
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 4  AQKVTVMVVVILVGLAGI--SIAMEICGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSN 63
          ++KV +MV+V+++    +  S+A+++CG+ +  L  C P V+K  P   P   CCN L +
Sbjct: 3  SKKVAIMVIVMVMASLVVERSVAIDLCGMTQAELNECLPAVSKNNPTS-PSLLCCNALKH 62

Query: 64 ADFDCFCKYKNSMLLSSFGIDSDLALALP 91
          AD+ C C YKNS  L SFG+D  LA +LP
Sbjct: 63 ADYTCLCGYKNSPWLGSFGVDPKLASSLP 90

The following BLAST results are available for this feature:

BLAST of Chy1G014620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W453	1.9e-13	45.98	Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=...	[more]

BLAST of Chy1G014620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4Q7	4.6e-42	97.78	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV...	[more]
A0A5D3D158	3.4e-37	87.78	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BHS9	1.7e-36	86.67	putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103489717 PE=...	[more]
A0A6J1DS99	1.3e-25	66.30	putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1GPI5	9.6e-24	66.67	putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC1114562...	[more]

BLAST of Chy1G014620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646276.1	3.79e-56	97.78	hypothetical protein Csa_016013 [Cucumis sativus]	[more]
KAA0041998.1	3.95e-50	87.78	putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa] >TYK17933.1 puta...	[more]
XP_008447223.1	3.24e-49	86.67	PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo]	[more]
XP_022156089.1	6.76e-35	66.30	putative lipid-transfer protein DIR1 [Momordica charantia]	[more]
KAG6593049.1	1.37e-33	64.44	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Chy1G014620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48485.1	1.4e-14	45.98	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G48490.1	2.9e-12	41.57	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 24..97 e-value: 1.4E-15 score: 58.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 28..90
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 24..90 e-value: 2.5E-6 score: 27.5
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 7..93
None	No IPR available	PANTHER	PTHR33122:SF63	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 7..93
IPR044741	Non-specific lipid-transfer protein-like	CDD	cd04660	nsLTP_like	coord: 28..90 e-value: 1.30675E-12 score: 56.2234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G014620.1	Chy1G014620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding