Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGATAACATTGTTGCAGCAAGAACGGTTTTCGAAAGAATAAGTACGGATGAGATACTTTATGGAGTACGACTTGGAGCAGGTGATGTGCGATTTCTCGTTGAACTTGCACGTGACAATCATTCTCTACTGCACATACCGATTGTTGGAAGCATCTATTCTGTACACGATGCAATTGGTTCAAACGTTCCATGGAAAAAGCATCTTATAGTTATAGAAAAACAAAAAAAGGTAAAGTTTTAATATCAAAATATAAATTTTTGCACATAAGCATGTATTCATTTTAATTTTTGACATTCTTTTTATATAGACATCTAGTAAAAAGTCTTGTGAGGCAAAATCTTTGAAAGGAACAAAATAAAAAATTAATGAATTAAAATTGTCAATAACAATAAGGTTCGTGTTGAGGCATGTAGAGAAGGATATGAAAGATGAATATCTTACTATCCCAGTCGACACTGAGGAGATTTTTGGGTATAGCTTCAATGTGAACGTGATGAATGACAGCATTAAACAATTTTTTCTGATGTAAGTGCGCAAGTTTAAAATCTTATTTTTATTATATTTTTAGATGCTTATTTCTATTATTACAAGTTTTTTTTTTAATGTCAGATGCTTATATGAATCTGATCCAAGTATTCTAGATGAATATGCATTCATGAATCCTGTACAAATTTCAAAAGGTTCAGGTACTGACGAACATAAAGCTCGATATTTGTGTAATAGATTGATATCGATCAAGAATAAATTATTGATATGTCTATTTAATTGCAGGTAAGTTAGAAAACAAGTATTGTTATTTTTCATATGTTTTTTAATTATAATATTTTTTATTAACTTGATTGAAACATATGTTTATTATATAGATATCATTAGATATTATTTATTATCTCATTATGGACGAATACGGTGTATGCACTTGATTTGTTAAGACATGGTAGTGTTCGAGACGAGTTGAAATCTATGGTGAACACGTAAGTATTTGACAGTTATTTCACATAAGTGTATATTTATTGTATAAATTGTAGTTTGTTATATCTTTTATATTTTTTTATTCTTTTTAATCCAGAGCCTTAAGAATGTTTTATGCTGAAACAAATACAAGAGCTCGACCTTTTACTTGGGTTTCAAGTATGAGTACTTAA
mRNA sequence
GTTGATAACATTGTTGCAGCAAGAACGGTTTTCGAAAGAATAAGTACGGATGAGATACTTTATGGAGTACGACTTGGAGCAGGTGATGTGCGATTTCTCGTTGAACTTGCACGTGACAATCATTCTCTACTGCACATACCGATTGTTGGAAGCATCTATTCTGTACACGATGCAATTGGTTCAAACGTTCCATGGAAAAAGCATCTTATAGTTATAGAAAAACAAAAAAAGACATCTAGTAAAAAGTTCGTGTTGAGGCATGTAGAGAAGGATATGAAAGATGAATATCTTACTATCCCAGTCGACACTGAGGAGATTTTTGGGTATAGCTTCAATGTGAACGTGATGAATGACAGCATTAAACAATTTTTTCTGATATGCTTATATGAATCTGATCCAAGTATTCTAGATGAATATGCATTCATGAATCCTGTACAAATTTCAAAAGGTTCAGGTAAGTTAGAAAACAAGTATTGTTATTTTTCATATATATTATTTATTATCTCATTATGGACGAATACGGTGTATGCACTTGATTTGTTAAGACATGGTAGTGTTCGAGACGAGTTGAAATCTATGGTGAACACAGCCTTAAGAATGTTTTATGCTGAAACAAATACAAGAGCTCGACCTTTTACTTGGGTTTCAAGTATGAGTACTTAA
Coding sequence (CDS)
GTTGATAACATTGTTGCAGCAAGAACGGTTTTCGAAAGAATAAGTACGGATGAGATACTTTATGGAGTACGACTTGGAGCAGGTGATGTGCGATTTCTCGTTGAACTTGCACGTGACAATCATTCTCTACTGCACATACCGATTGTTGGAAGCATCTATTCTGTACACGATGCAATTGGTTCAAACGTTCCATGGAAAAAGCATCTTATAGTTATAGAAAAACAAAAAAAGACATCTAGTAAAAAGTTCGTGTTGAGGCATGTAGAGAAGGATATGAAAGATGAATATCTTACTATCCCAGTCGACACTGAGGAGATTTTTGGGTATAGCTTCAATGTGAACGTGATGAATGACAGCATTAAACAATTTTTTCTGATATGCTTATATGAATCTGATCCAAGTATTCTAGATGAATATGCATTCATGAATCCTGTACAAATTTCAAAAGGTTCAGGTAAGTTAGAAAACAAGTATTGTTATTTTTCATATATATTATTTATTATCTCATTATGGACGAATACGGTGTATGCACTTGATTTGTTAAGACATGGTAGTGTTCGAGACGAGTTGAAATCTATGGTGAACACAGCCTTAAGAATGTTTTATGCTGAAACAAATACAAGAGCTCGACCTTTTACTTGGGTTTCAAGTATGAGTACTTAA
Protein sequence
VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIGSNVPWKKHLIVIEKQKKTSSKKFVLRHVEKDMKDEYLTIPVDTEEIFGYSFNVNVMNDSIKQFFLICLYESDPSILDEYAFMNPVQISKGSGKLENKYCYFSYILFIISLWTNTVYALDLLRHGSVRDELKSMVNTALRMFYAETNTRARPFTWVSSMST*
Homology
BLAST of Chy1G014470 vs. ExPASy TrEMBL
Match:
A0A5A7VPW2 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00380 PE=4 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 8.4e-64
Identity = 141/230 (61.30%), Postives = 155/230 (67.39%), Query Frame = 0
Query: 24 RLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIGSNVPWKKHLIVIEKQKKTSSKK- 83
RLG GDVR L+ELA D+HSLL IP+VGSIYSVHDAIGS+VPW+K+LI IE+QKKTSSKK
Sbjct: 473 RLGEGDVRVLIELACDSHSLLPIPVVGSIYSVHDAIGSHVPWRKYLIAIEEQKKTSSKKC 532
Query: 84 -----------------------FVLRHVEKDMKDEYLTIPVDTEEIFGYSFNVNVMNDS 143
FVL+HVEKDMKDEYLTIPVDT+E+ GYSFNVNVM DS
Sbjct: 533 RELEALKGTKSKMNELKLPLTIRFVLKHVEKDMKDEYLTIPVDTQELLGYSFNVNVMKDS 592
Query: 144 IKQF-------------FLICLYESDPSILDEYAFMNPVQISKGSGKLENKYCYFSYILF 203
IKQ ++ICLYESDPSI++EYAFMNP QI K
Sbjct: 593 IKQLCLMEELTLSVILSYMICLYESDPSIVEEYAFMNPGQILK----------------- 652
Query: 204 IISLWTNTVYALDLLRHGSVRDELKSMVNTALRMFYAETNTRARPFTWVS 217
VYALD LRHGSVRDELKSMVNT LRMFYAETNTRARP TWVS
Sbjct: 653 --------VYALDSLRHGSVRDELKSMVNTGLRMFYAETNTRARPLTWVS 677
BLAST of Chy1G014470 vs. ExPASy TrEMBL
Match:
A0A5A7UBK9 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00720 PE=4 SV=1)
HSP 1 Score: 220.7 bits (561), Expect = 6.1e-54
Identity = 121/184 (65.76%), Postives = 134/184 (72.83%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA TVFERIST EI+YGVRLG GDV L+ELA D+HSLL IPIV SIYS+HDAIG
Sbjct: 355 VDNIVATGTVFERISTGEIVYGVRLGEGDVGVLIELACDSHSLLPIPIVESIYSIHDAIG 414
Query: 61 SNVPWKKHLIVIEKQKKTSSKK------------------------FVLRHVEKDMKDEY 120
S+VPW K+LIVIE+QKKTSSKK FVLRHVEKDM+DEY
Sbjct: 415 SHVPWPKYLIVIEEQKKTSSKKSHELEALKGTKSKMNELKLPTTIRFVLRHVEKDMEDEY 474
Query: 121 LTIPVDTEEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMN 148
LTIPVDT+EIFGYSFNVNVM DS+KQ ++ICLYESDPSIL+EYAFMN
Sbjct: 475 LTIPVDTQEIFGYSFNVNVMKDSMKQLCLMEELAFSVILSYMICLYESDPSILEEYAFMN 534
BLAST of Chy1G014470 vs. ExPASy TrEMBL
Match:
A0A5D3D5S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00800 PE=4 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 7.9e-54
Identity = 122/194 (62.89%), Postives = 137/194 (70.62%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA VFERIST+EI+Y VRLG GDV +ELA D+HSLL IPIVG+IYSVHDAIG
Sbjct: 117 VDNIVAIGIVFERISTNEIVYRVRLGEGDVWVFIELACDSHSLLPIPIVGNIYSVHDAIG 176
Query: 61 SNVPWKKHLIVIEKQKKTSSKK------------------------FVLRHVEKDMKDEY 120
S+V W+K+LIVIE+QKKTSSKK FVLRHVEKDM DEY
Sbjct: 177 SHVSWQKYLIVIEEQKKTSSKKPRELEALKGTKLKMNELKLSTTIRFVLRHVEKDMNDEY 236
Query: 121 LTIPVDTEEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMN 158
LTIPVDT+EIFGYSFNVNVM DSIKQ ++ICLYESDP IL+EY FMN
Sbjct: 237 LTIPVDTQEIFGYSFNVNVMKDSIKQLCLMEELALSVILSYIICLYESDPCILEEYEFMN 296
BLAST of Chy1G014470 vs. ExPASy TrEMBL
Match:
A0A5D3BSF6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00180 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.6e-51
Identity = 118/183 (64.48%), Postives = 132/183 (72.13%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA RTVFERISTDEI+YGVRLG G+V+ LVELA D+HSLL I IVGSI+S+HDAIG
Sbjct: 87 VDNIVATRTVFERISTDEIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIG 146
Query: 61 SNVPWKKHLIVIEKQ-------KKTSSK----------KFVLRHVEKDMKDEYLTIPVDT 120
S++PW K+LI K+ K T SK +FVLRHVEKD KDEYLTIPVDT
Sbjct: 147 SHIPWPKYLITSSKKSRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDT 206
Query: 121 EEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMNPVQISKG 154
EIFGYSFNVNVM D IKQ ++ICLYESDPSIL+EYAFMNP QI KG
Sbjct: 207 WEIFGYSFNVNVMKDGIKQLCLMEELALSMILSYIICLYESDPSILEEYAFMNPGQILKG 266
BLAST of Chy1G014470 vs. ExPASy TrEMBL
Match:
A0A5A7TWM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001620 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.6e-51
Identity = 118/183 (64.48%), Postives = 132/183 (72.13%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA RTVFERISTDEI+YGVRLG G+V+ LVELA D+HSLL I IVGSI+S+HDAIG
Sbjct: 86 VDNIVATRTVFERISTDEIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIG 145
Query: 61 SNVPWKKHLIVIEKQ-------KKTSSK----------KFVLRHVEKDMKDEYLTIPVDT 120
S++PW K+LI K+ K T SK +FVLRHVEKD KDEYLTIPVDT
Sbjct: 146 SHIPWPKYLITSSKKSRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDT 205
Query: 121 EEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMNPVQISKG 154
EIFGYSFNVNVM D IKQ ++ICLYESDPSIL+EYAFMNP QI KG
Sbjct: 206 WEIFGYSFNVNVMKDGIKQLCLMEELALSMILSYIICLYESDPSILEEYAFMNPGQILKG 265
BLAST of Chy1G014470 vs. NCBI nr
Match:
KAA0067725.1 (uncharacterized protein E6C27_scaffold352G00380 [Cucumis melo var. makuwa])
HSP 1 Score: 250 bits (639), Expect = 7.38e-75
Identity = 141/230 (61.30%), Postives = 155/230 (67.39%), Query Frame = 0
Query: 24 RLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIGSNVPWKKHLIVIEKQKKTSSKK- 83
RLG GDVR L+ELA D+HSLL IP+VGSIYSVHDAIGS+VPW+K+LI IE+QKKTSSKK
Sbjct: 473 RLGEGDVRVLIELACDSHSLLPIPVVGSIYSVHDAIGSHVPWRKYLIAIEEQKKTSSKKC 532
Query: 84 -----------------------FVLRHVEKDMKDEYLTIPVDTEEIFGYSFNVNVMNDS 143
FVL+HVEKDMKDEYLTIPVDT+E+ GYSFNVNVM DS
Sbjct: 533 RELEALKGTKSKMNELKLPLTIRFVLKHVEKDMKDEYLTIPVDTQELLGYSFNVNVMKDS 592
Query: 144 IKQF-------------FLICLYESDPSILDEYAFMNPVQISKGSGKLENKYCYFSYILF 203
IKQ ++ICLYESDPSI++EYAFMNP QI K
Sbjct: 593 IKQLCLMEELTLSVILSYMICLYESDPSIVEEYAFMNPGQILK----------------- 652
Query: 204 IISLWTNTVYALDLLRHGSVRDELKSMVNTALRMFYAETNTRARPFTWVS 216
VYALD LRHGSVRDELKSMVNT LRMFYAETNTRARP TWVS
Sbjct: 653 --------VYALDSLRHGSVRDELKSMVNTGLRMFYAETNTRARPLTWVS 677
BLAST of Chy1G014470 vs. NCBI nr
Match:
TYK18876.1 (uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 218 bits (555), Expect = 6.25e-66
Identity = 122/194 (62.89%), Postives = 137/194 (70.62%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA VFERIST+EI+Y VRLG GDV +ELA D+HSLL IPIVG+IYSVHDAIG
Sbjct: 117 VDNIVAIGIVFERISTNEIVYRVRLGEGDVWVFIELACDSHSLLPIPIVGNIYSVHDAIG 176
Query: 61 SNVPWKKHLIVIEKQKKTSSKK------------------------FVLRHVEKDMKDEY 120
S+V W+K+LIVIE+QKKTSSKK FVLRHVEKDM DEY
Sbjct: 177 SHVSWQKYLIVIEEQKKTSSKKPRELEALKGTKLKMNELKLSTTIRFVLRHVEKDMNDEY 236
Query: 121 LTIPVDTEEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMN 157
LTIPVDT+EIFGYSFNVNVM DSIKQ ++ICLYESDP IL+EY FMN
Sbjct: 237 LTIPVDTQEIFGYSFNVNVMKDSIKQLCLMEELALSVILSYIICLYESDPCILEEYEFMN 296
BLAST of Chy1G014470 vs. NCBI nr
Match:
KAA0053273.1 (putative transposase [Cucumis melo var. makuwa])
HSP 1 Score: 218 bits (556), Expect = 2.30e-64
Identity = 121/184 (65.76%), Postives = 134/184 (72.83%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA TVFERIST EI+YGVRLG GDV L+ELA D+HSLL IPIV SIYS+HDAIG
Sbjct: 355 VDNIVATGTVFERISTGEIVYGVRLGEGDVGVLIELACDSHSLLPIPIVESIYSIHDAIG 414
Query: 61 SNVPWKKHLIVIEKQKKTSSKK------------------------FVLRHVEKDMKDEY 120
S+VPW K+LIVIE+QKKTSSKK FVLRHVEKDM+DEY
Sbjct: 415 SHVPWPKYLIVIEEQKKTSSKKSHELEALKGTKSKMNELKLPTTIRFVLRHVEKDMEDEY 474
Query: 121 LTIPVDTEEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMN 147
LTIPVDT+EIFGYSFNVNVM DS+KQ ++ICLYESDPSIL+EYAFMN
Sbjct: 475 LTIPVDTQEIFGYSFNVNVMKDSMKQLCLMEELAFSVILSYMICLYESDPSILEEYAFMN 534
BLAST of Chy1G014470 vs. NCBI nr
Match:
KAA0045649.1 (uncharacterized protein E6C27_scaffold243G001620 [Cucumis melo var. makuwa])
HSP 1 Score: 210 bits (535), Expect = 2.21e-63
Identity = 118/183 (64.48%), Postives = 132/183 (72.13%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA RTVFERISTDEI+YGVRLG G+V+ LVELA D+HSLL I IVGSI+S+HDAIG
Sbjct: 86 VDNIVATRTVFERISTDEIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIG 145
Query: 61 SNVPWKKHLIVIEKQ-------KKTSSK----------KFVLRHVEKDMKDEYLTIPVDT 120
S++PW K+LI K+ K T SK +FVLRHVEKD KDEYLTIPVDT
Sbjct: 146 SHIPWPKYLITSSKKSRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDT 205
Query: 121 EEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMNPVQISKG 153
EIFGYSFNVNVM D IKQ ++ICLYESDPSIL+EYAFMNP QI KG
Sbjct: 206 WEIFGYSFNVNVMKDGIKQLCLMEELALSMILSYIICLYESDPSILEEYAFMNPGQILKG 265
BLAST of Chy1G014470 vs. NCBI nr
Match:
TYK02613.1 (uncharacterized protein E5676_scaffold280G00180 [Cucumis melo var. makuwa])
HSP 1 Score: 210 bits (535), Expect = 2.27e-63
Identity = 118/183 (64.48%), Postives = 132/183 (72.13%), Query Frame = 0
Query: 1 VDNIVAARTVFERISTDEILYGVRLGAGDVRFLVELARDNHSLLHIPIVGSIYSVHDAIG 60
VDNIVA RTVFERISTDEI+YGVRLG G+V+ LVELA D+HSLL I IVGSI+S+HDAIG
Sbjct: 87 VDNIVATRTVFERISTDEIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIG 146
Query: 61 SNVPWKKHLIVIEKQ-------KKTSSK----------KFVLRHVEKDMKDEYLTIPVDT 120
S++PW K+LI K+ K T SK +FVLRHVEKD KDEYLTIPVDT
Sbjct: 147 SHIPWPKYLITSSKKSRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDT 206
Query: 121 EEIFGYSFNVNVMNDSIKQF-------------FLICLYESDPSILDEYAFMNPVQISKG 153
EIFGYSFNVNVM D IKQ ++ICLYESDPSIL+EYAFMNP QI KG
Sbjct: 207 WEIFGYSFNVNVMKDGIKQLCLMEELALSMILSYIICLYESDPSILEEYAFMNPGQILKG 266
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VPW2 | 8.4e-64 | 61.30 | DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7UBK9 | 6.1e-54 | 65.76 | Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102... | [more] |
A0A5D3D5S7 | 7.9e-54 | 62.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BSF6 | 1.6e-51 | 64.48 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TWM1 | 1.6e-51 | 64.48 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0067725.1 | 7.38e-75 | 61.30 | uncharacterized protein E6C27_scaffold352G00380 [Cucumis melo var. makuwa] | [more] |
TYK18876.1 | 6.25e-66 | 62.89 | uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa] | [more] |
KAA0053273.1 | 2.30e-64 | 65.76 | putative transposase [Cucumis melo var. makuwa] | [more] |
KAA0045649.1 | 2.21e-63 | 64.48 | uncharacterized protein E6C27_scaffold243G001620 [Cucumis melo var. makuwa] | [more] |
TYK02613.1 | 2.27e-63 | 64.48 | uncharacterized protein E5676_scaffold280G00180 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |