Chy1G014000 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G014000
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha
Location	chrH01: 19058753 .. 19059458 (+)
RNA-Seq Expression	Chy1G014000
Synteny	Chy1G014000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAGGGACTTATAAGGAGAAGAAATTCAATGCAATTTGCCACTTCTTTGGTTACCAGGCTCGGGGATCTTTACCTTCAAAATTTGATTGCGACTATGCCTTCGTATGTGATAATTAGTAGTCTTGGAATCTCACAAGCGTTTCTAGGCATTATCAAATGGGCTACCTACAATTCACGTTGTTTTTTTAAGAGATTTTTTTTTTTTAATGGTGCTCAAGGTAAATTAATCTTCTTCCAAAATAATACATATTACTAACATGCGAAAGAAACACTTCAATCACAAGACTCAATCAACATTGCAATTCCCTAATTTCTGAATTGCAATTTTTTTCATCTTTTTCAATGGTTAAATTTGTAGCAGAAGATATTTGACTTGTCAACTGTGGCACTTGGAAAATGATATCCTTTGTTGAGTTGTATCTGTCAATTCGACAATATAATTTTGGATCCATGCTGAAACTATTACTACCACATGATTTGTATAAATTGTCCAATAAAATGGTGTATTACTCAAGTTACAATACTAGGTTCTTTCCATTATGTTTTTTCTAATACTATATATTCTCAGGTGCATTGCTCTTTTCCTTTTAACAGGTCAAAATGTGGTGCACAAGACATTAGGGAATTACTTACTAACTTCAAATTGATTACTTTAGGCTCCTCCATCTTGGACCTTGGTTGTGCTCCCGATGCCTGGCTTCAG

mRNA sequence

AAAGAAGGGACTTATAAGGAGAAGAAATTCAATGCAATTTGCCACTTCTTTGGTTACCAGGCTCGGGGATCTTTACCTTCAAAATTTGATTGCGACTATGCCTTCGTCAAAATGTGGTGCACAAGACATTAGGGAATTACTTACTAACTTCAAATTGATTACTTTAGGCTCCTCCATCTTGGACCTTGGTTGTGCTCCCGATGCCTGGCTTCAG

Coding sequence (CDS)

AAAGAAGGGACTTATAAGGAGAAGAAATTCAATGCAATTTGCCACTTCTTTGGTTACCAGGCTCGGGGATCTTTACCTTCAAAATTTGATTGCGACTATGCCTTCGTCAAAATGTGGTGCACAAGACATTAGGGAATTACTTACTAACTTCAAATTGATTACTTTAGGCTCCTCCATCTTGGACCTTGGTTGTGCTCCCGATGCCTGGCTTCAG

Protein sequence

KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMWCTRH*GITY*LQIDYFRLLHLGPWLCSRCLASX

Homology

[Close]

BLAST of Chy1G014000 vs. ExPASy Swiss-Prot
Match: Q9SYP2 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA1 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-14
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 37
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 447

[Close]

BLAST of Chy1G014000 vs. ExPASy Swiss-Prot
Match: Q9C9K3 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-14
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 37
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 447

[Close]

BLAST of Chy1G014000 vs. ExPASy Swiss-Prot
Match: Q41140 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis OX=3988 GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-14
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 37
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 447

[Close]

BLAST of Chy1G014000 vs. ExPASy Swiss-Prot
Match: P21342 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum OX=4113 GN=PFP-ALPHA PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-14
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 37
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 447

[Close]

BLAST of Chy1G014000 vs. ExPASy Swiss-Prot
Match: Q9EZ02 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) OX=665571 GN=pfp PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.8e-04
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAF 36
           +EG YK  KF+A+ HFFGY+AR + PS FD DY +
Sbjct: 409 EEGAYK-GKFSALNHFFGYEARCAFPSNFDADYCY 442

[Close]

BLAST of Chy1G014000 vs. ExPASy TrEMBL
Match: A0A2U1PBU7 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Artemisia annua OX=35608 GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.4e-13
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMWCTRH 44
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V   C  H
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHCCYH 454

[Close]

BLAST of Chy1G014000 vs. ExPASy TrEMBL
Match: A0A1D6Q8J4 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Zea mays OX=4577 GN=100280449 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMW 40
           KEGTYK KKFNAICHFFGYQARG+LPSKFDCDYA+V  W
Sbjct: 258 KEGTYKGKKFNAICHFFGYQARGALPSKFDCDYAYVGCW 296

[Close]

BLAST of Chy1G014000 vs. ExPASy TrEMBL
Match: A0A5A7PW37 (Pyrophosphate-dependent phosphofructokinase alpha subunit OS=Striga asiatica OX=4170 GN=STAS_13370 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12
Identity = 35/43 (81.40%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMWCTRH 44
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+  M   R+
Sbjct: 690 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYAMMTVRRY 732

[Close]

BLAST of Chy1G014000 vs. ExPASy TrEMBL
Match: A0A7J0GIF2 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Actinidia rufa OX=165716 GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMWCTRH 44
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V    T H
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHITYH 454

[Close]

BLAST of Chy1G014000 vs. ExPASy TrEMBL
Match: A0A2R6RM90 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Actinidia chinensis var. chinensis OX=1590841 GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.9e-12
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMWCTRH 44
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V    T H
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHTTYH 454

[Close]

BLAST of Chy1G014000 vs. NCBI nr
Match: KAF3338703.1 (pyrophosphate-fructose-6-phosphate1-phosphotransferase alpha subunit [Carex littledalei])

HSP 1 Score: 81.3 bits (199), Expect = 5.06e-17
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMW-CT 41
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V ++ CT
Sbjct: 148 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVWVYLCT 189

[Close]

BLAST of Chy1G014000 vs. NCBI nr
Match: THU50613.1 (hypothetical protein C4D60_Mb06t22110 [Musa balbisiana])

HSP 1 Score: 82.4 bits (202), Expect = 1.11e-16
Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMWCTRH*GITY*LQIDYFRLLHL 60
           KEGTYK KKFNAI HFFGYQARGSLPSKFDCDYAFV     RH   ++ L  D +R  + 
Sbjct: 171 KEGTYKGKKFNAILHFFGYQARGSLPSKFDCDYAFVSPLLLRHSASSF-LMDDIYR--NP 230

Query: 61  GPW 63
           GP+
Sbjct: 231 GPF 230

[Close]

BLAST of Chy1G014000 vs. NCBI nr
Match: KAG5542692.1 (hypothetical protein RHGRI_015723 [Rhododendron griersonianum])

HSP 1 Score: 80.9 bits (198), Expect = 1.66e-16
Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1  KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 36
          KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYAFV
Sbjct: 30 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAFV 65

[Close]

BLAST of Chy1G014000 vs. NCBI nr
Match: PWA83226.1 (pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Artemisia annua])

HSP 1 Score: 83.2 bits (204), Expect = 1.68e-16
Identity = 36/43 (83.72%), Postives = 37/43 (86.05%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFVKMWCTRH 43
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V   C  H
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHCCYH 454

[Close]

BLAST of Chy1G014000 vs. NCBI nr
Match: KAF3331238.1 (pyrophosphate-fructose-6-phosphate1-phosphotransferase alpha subunit [Carex littledalei])

HSP 1 Score: 79.7 bits (195), Expect = 2.17e-16
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 36
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V
Sbjct: 153 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 188

[Close]

BLAST of Chy1G014000 vs. TAIR 10
Match: AT1G20950.1 (Phosphofructokinase family protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 37
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 447

[Close]

BLAST of Chy1G014000 vs. TAIR 10
Match: AT1G76550.1 (Phosphofructokinase family protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 1   KEGTYKEKKFNAICHFFGYQARGSLPSKFDCDYAFV 37
           KEGTYK KKFNAICHFFGYQARGSLPSKFDCDYA+V
Sbjct: 412 KEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYV 447

The following BLAST results are available for this feature:

BLAST of Chy1G014000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYP2	1.9e-14	94.44	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arab...	[more]
Q9C9K3	1.9e-14	94.44	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arab...	[more]
Q41140	1.9e-14	94.44	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinu...	[more]
P21342	1.9e-14	94.44	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanu...	[more]
Q9EZ02	1.8e-04	57.14	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Spirochaeta thermoph...	[more]

BLAST of Chy1G014000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2U1PBU7	6.4e-13	83.72	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Artemi...	[more]
A0A1D6Q8J4	1.4e-12	87.18	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Zea ...	[more]
A0A5A7PW37	1.9e-12	81.40	Pyrophosphate-dependent phosphofructokinase alpha subunit OS=Striga asiatica OX=...	[more]
A0A7J0GIF2	1.9e-12	83.72	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Actini...	[more]
A0A2R6RM90	1.9e-12	83.72	Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Actini...	[more]

BLAST of Chy1G014000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3338703.1	5.06e-17	85.71	pyrophosphate-fructose-6-phosphate1-phosphotransferase alpha subunit [Carex litt...	[more]
THU50613.1	1.11e-16	65.08	hypothetical protein C4D60_Mb06t22110 [Musa balbisiana]	[more]
KAG5542692.1	1.66e-16	97.22	hypothetical protein RHGRI_015723 [Rhododendron griersonianum]	[more]
PWA83226.1	1.68e-16	83.72	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Artemisi...	[more]
KAF3331238.1	2.17e-16	94.44	pyrophosphate-fructose-6-phosphate1-phosphotransferase alpha subunit [Carex litt...	[more]

BLAST of Chy1G014000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20950.1	1.4e-15	94.44	Phosphofructokinase family protein	[more]
AT1G76550.1	1.4e-15	94.44	Phosphofructokinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.450		coord: 26..36 e-value: 3.6E-11 score: 44.1
None	No IPR available	PANTHER	PTHR43650:SF7	PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE SUBUNIT ALPHA	coord: 1..43
None	No IPR available	PANTHER	PTHR43650	PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE	coord: 1..43
IPR035966	Phosphofructokinase superfamily	GENE3D	3.40.50.460	Phosphofructokinase domain	coord: 1..25 e-value: 3.6E-11 score: 44.1
IPR035966	Phosphofructokinase superfamily	SUPERFAMILY	53784	Phosphofructokinase	coord: 8..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G014000.1	Chy1G014000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0061615	glycolytic process through fructose-6-phosphate
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009749	response to glucose
biological_process	GO:0006096	glycolytic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0089701	U2AF complex
molecular_function	GO:0003872	6-phosphofructokinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0047334	diphosphate-fructose-6-phosphate 1-phosphotransferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding