Chy1G013400 (gene) Cucumber (hystrix) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCTTGCAACTCTTTATTGGGAATGAAGTGCGCAATGCAAAGCATGATCAAGCACACTTGTTTCTTTTGCCTGGGAAGGTGATGTCTCAAAACTATATAAATTTAGATTGGGGTCCTATTACTTTAGTTTTTTTTTGTTGAACTGCTTGATGTCAACGCTCTGTATCTACTCATGCCAATTTCTGAATTTTAGACCGAGAGTTGTCTTAAGTAGTTTGTGTTCGAACTGCTTTGTACTTTTACATATTTGGGCATCATTGGAGGAGCTAATGTTCTTTGTACTTTATAGAGATGTTTTGATAATTTTTATATTTGGAACATAGTATTTTTTATATTTTTATGTTTATGGACTTGGGATGTGGATATGAATTATGATAATCCATCCTTGTTGTGCTTCCACAAATAAAAAAAAGGAAAAAAAGAAAGAAAAAAAAAGGCAATTCATCCTTGTTGCAAAAAATGACTAAGAAAATCTACTTTCATTTATCCATTTTCTTTTAATTGCTGGCTTTAGGTTGTTCTTTTGTTAAAGTTGTTATCCATCTTTCGCTATGTGATGGATATGTATCTATATACTTCAATTCATGTGATGTGATGTATTCGTGCTTTGTTGTTGTTAGATGTCAATTGGATGCGGAGACGGAATTTGAAGAGGTTGTTGTTGATGATGCCACTGACTTGGGGATTGTTGGGGAGGAGGAACTAGATTGTTGCTACTGTCAAATTCTAAATGGCAGCTTGCAACTCTTTATTGGGAATGAAGTGCGCAATGCAAAGCATGATCAAGCACACTTGTTTCTTTTGCCTGGGAAGATGTCAATTGGATGCGGAGACGGAATTTGAAGAGGTTGTTGTTGATGATGCCACTGACTTGGGGATTGTTGGGGAGGAGGAACTAGATTGTTGCTACTGTCAAATTCTAA ATGGCAGCTTGCAACTCTTTATTGGGAATGAAGTGCGCAATGCAAAGCATGATCAAGCACACTTGTTTCTTTTGCCTGGGAAGATGTCAATTGGATGCGGAGACGGAATTTGAAGAGGTTGTTGTTGATGATGCCACTGACTTGGGGATTGTTGGGGAGGAGGAACTAGATTGTTGCTACTGTCAAATTCTAA MAACNSLLGMKCAMQSMIKHTCFFCLGRCQLDAETEFEEVVVDDATDLGIVGEEELDCCYCQILX Homology
BLAST of Chy1G013400 vs. ExPASy TrEMBL
Match: A0A5A7TU84 (Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001580 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.8e-05 Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of Chy1G013400 vs. ExPASy TrEMBL
Match: A0A1S3C642 (Signal sequence receptor subunit alpha OS=Cucumis melo OX=3656 GN=LOC103497301 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.8e-05 Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of Chy1G013400 vs. ExPASy TrEMBL
Match: A0A0A0LJC2 (Signal sequence receptor subunit alpha OS=Cucumis sativus OX=3659 GN=Csa_2G263930 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.9e-04 Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of Chy1G013400 vs. NCBI nr
Match: XP_008457651.1 (PREDICTED: translocon-associated protein subunit alpha [Cucumis melo] >KAA0045696.1 translocon-associated protein subunit alpha [Cucumis melo var. makuwa] >TYJ99586.1 translocon-associated protein subunit alpha [Cucumis melo var. makuwa]) HSP 1 Score: 57.0 bits (136), Expect = 1.53e-07 Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0
BLAST of Chy1G013400 vs. NCBI nr
Match: XP_004147020.1 (translocon-associated protein subunit alpha [Cucumis sativus] >KGN61898.1 hypothetical protein Csa_006583 [Cucumis sativus]) HSP 1 Score: 53.9 bits (128), Expect = 2.04e-06 Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of Chy1G013400 vs. NCBI nr
Match: XP_038902527.1 (translocon-associated protein subunit alpha [Benincasa hispida]) HSP 1 Score: 50.1 bits (118), Expect = 5.06e-05 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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