Chy1G013340 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G013340
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	S-protein homolog
Location	chrH01: 17274952 .. 17275398 (+)
RNA-Seq Expression	Chy1G013340
Synteny	Chy1G013340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGAAAAATGTGGTTGTTTTGTGGCTCGTGACGGCAACTTTGGTGGTTGAGGCTCAAATTTCGAAGAAAGTGGTAATAAGGCTACCGCCAGGGAGGTATTTCATTCATGTTGCAAATGATCTAACTAACCAAGATATGTTTGCACATTGTCAGTCCAAGGACGATGATTTGGGAATTCAACATTTGGTTCGCCGTGGAGATGAATTTCGATGGAACTTCAAGGAAAACTTTTGGAAAACAACTTTATTTTGGTGCCGATTGGAGAAGTCAGATGCCTATGTCTCTTTCGATGTCTTTTGGCCTGAGAGTAAGCACCACTGGCTTCGTGATCGGTGTGGGAGTCAAGGAGTTTGTATTTGGTCTGCTAGCGATGATGGAATTTACTTAAGGAACTTGCCAGCTGAAAATGAAGAGTTTGTTCACAAATGGATCATTACTAGA

mRNA sequence

ATGATGATGAAAAATGTGGTTGTTTTGTGGCTCGTGACGGCAACTTTGGTGGTTGAGGCTCAAATTTCGAAGAAAGTGGTAATAAGGCTACCGCCAGGGAGGTATTTCATTCATGTTGCAAATGATCTAACTAACCAAGATATGTTTGCACATTGTCAGTCCAAGGACGATGATTTGGGAATTCAACATTTGGTTCGCCGTGGAGATGAATTTCGATGGAACTTCAAGGAAAACTTTTGGAAAACAACTTTATTTTGGTGCCGATTGGAGAAGTCAGATGCCTATGTCTCTTTCGATGTCTTTTGGCCTGAGAGTAAGCACCACTGGCTTCGTGATCGGTGTGGGAGTCAAGGAGTTTGTATTTGGTCTGCTAGCGATGATGGAATTTACTTAAGGAACTTGCCAGCTGAAAATGAAGAGTTTGTTCACAAATGGATCATTACTAGA

Coding sequence (CDS)

ATGATGATGAAAAATGTGGTTGTTTTGTGGCTCGTGACGGCAACTTTGGTGGTTGAGGCTCAAATTTCGAAGAAAGTGGTAATAAGGCTACCGCCAGGGAGGTATTTCATTCATGTTGCAAATGATCTAACTAACCAAGATATGTTTGCACATTGTCAGTCCAAGGACGATGATTTGGGAATTCAACATTTGGTTCGCCGTGGAGATGAATTTCGATGGAACTTCAAGGAAAACTTTTGGAAAACAACTTTATTTTGGTGCCGATTGGAGAAGTCAGATGCCTATGTCTCTTTCGATGTCTTTTGGCCTGAGAGTAAGCACCACTGGCTTCGTGATCGGTGTGGGAGTCAAGGAGTTTGTATTTGGTCTGCTAGCGATGATGGAATTTACTTAAGGAACTTGCCAGCTGAAAATGAAGAGTTTGTTCACAAATGGATCATTACTAGA

Protein sequence

MMMKNVVVLWLVTATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFVHKWIITR

Homology

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BLAST of Chy1G013340 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 37  IHVANDL-TNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAY 96
           + V N L T + +F HC+SK+DDLG  +L  R + F WNF EN   +T FWC + K + +
Sbjct: 43  VTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFWCYMNKDNGH 102

Query: 97  VSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFVHKW 146
           ++ +VFW +     L  RCG +  CIW+A  DG+YL N  +  +    KW
Sbjct: 103 MNVNVFWDDV---ILFHRCGWKN-CIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Chy1G013340 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.6e-17
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 37  IHVANDL-TNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAY 96
           + VAN L T + +F HC+SK++DLG  +L +  D F WNF EN   +TLFWC + K D +
Sbjct: 43  VTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCYMSKDDGH 102

Query: 97  VSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFVHKW 146
           ++  VFW +     L  RC  +  C+W+A +DG+YL N     +    KW
Sbjct: 103 MNVKVFWDDV---ILFHRCDWKN-CVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Chy1G013340 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 31/95 (32.63%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 37  IHVANDLTNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYV 96
           + + N +    +  HC+SK DDLGI H+V    E+ + F+ N WK+TLF+C  +    + 
Sbjct: 31  VTMTNLIGGPPLTIHCKSKQDDLGI-HVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFK 90

Query: 97  SFDVFWPESKHHWLRDRCGSQGV---CIWSASDDG 129
           SFD++          D    QG+   C W    DG
Sbjct: 91  SFDIY----------DAQRDQGICDDCQWEIKPDG 114

[Close]

BLAST of Chy1G013340 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-08
Identity = 31/116 (26.72%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 31  PPGRYFIHVANDLTNQ-DMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRL 90
           P  +  + + NDL NQ  +  HC+SKDDDLG    ++ G+ + ++F   F+  TL++C  
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLG-NRTLQPGESWSFSFGRQFFGRTLYFCSF 103

Query: 91  EKSDAYVSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFVHKW 146
              +   SFD++  + +     ++C S   C+W    +G    N   +  +  + W
Sbjct: 104 SWPNESHSFDIY-KDHRDSGGDNKCESDR-CVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Chy1G013340 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.8e-07
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 51  HCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWL 110
           HC+S+DDDLG  H++ +G+ F W F  NF  +TL++C   +          +  ++  + 
Sbjct: 61  HCKSRDDDLGF-HILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRDFY- 120

Query: 111 RDRCGSQGVCIWSASDDGIY 131
             RC +   C W A  DGIY
Sbjct: 121 --RCAN---CTWKAEKDGIY 133

[Close]

BLAST of Chy1G013340 vs. ExPASy TrEMBL
Match: A0A5A7U887 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001440 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.5e-75
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MMMKNVVVLWLVTATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLG 60
           MMM+NVVVLWL+ AT V EAQISK VVIR+PP RYFIHVANDLTNQDMF HCQSKDDDL 
Sbjct: 1   MMMRNVVVLWLLMATWVAEAQISKDVVIRVPPVRYFIHVANDLTNQDMFVHCQSKDDDLR 60

Query: 61  IQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVC 120
           IQHLV RGDEFRWNFKENFWKTTLFWCRLEKSDA+VSF+VFWPESKHHWLRDRCGSQGVC
Sbjct: 61  IQHLVHRGDEFRWNFKENFWKTTLFWCRLEKSDAHVSFNVFWPESKHHWLRDRCGSQGVC 120

Query: 121 IWSASDDGIYLRNLPAENEEFVHKWII 148
           IWSA DDGIYLRNLPA+NEEFVHKWII
Sbjct: 121 IWSAKDDGIYLRNLPAQNEEFVHKWII 147

[Close]

BLAST of Chy1G013340 vs. ExPASy TrEMBL
Match: A0A1S3CHP5 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500549 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 122/134 (91.04%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 14  ATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLGIQHLVRRGDEFRW 73
           AT V EAQISK VVIR+PP RYFIHVANDLTNQDMF HCQSKDDDL IQHLV RGDEFRW
Sbjct: 2   ATWVAEAQISKDVVIRVPPVRYFIHVANDLTNQDMFVHCQSKDDDLRIQHLVHRGDEFRW 61

Query: 74  NFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRN 133
           NFKENFWKTTLFWCRLEKSDA+VSF+VFWPESKHHWLRDRCGSQGVCIWSA DDGIYLRN
Sbjct: 62  NFKENFWKTTLFWCRLEKSDAHVSFNVFWPESKHHWLRDRCGSQGVCIWSAKDDGIYLRN 121

Query: 134 LPAENEEFVHKWII 148
           LPA+NEEFVHKWII
Sbjct: 122 LPAQNEEFVHKWII 135

[Close]

BLAST of Chy1G013340 vs. ExPASy TrEMBL
Match: A0A5A7UAS6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00440 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.2e-53
Identity = 96/146 (65.75%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 1   MMMKNVVVLWLVTATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLG 60
           MMM+NVVVLWL T  L VE ++SK +     P RYF+HV N L+ Q +  HCQSK+DDLG
Sbjct: 1   MMMRNVVVLWLATMVL-VEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLG 60

Query: 61  IQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVC 120
             HLV RGDE++WNF+EN W TTLFWCRLEK DAYV+F+ FWPE+K+ WLRDRCG+QG C
Sbjct: 61  YHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTC 120

Query: 121 IWSASDDGIYLRNLPAENEEFVHKWI 147
           IW+A DDGIYLRN+P   +EFVHKWI
Sbjct: 121 IWTAKDDGIYLRNMPTNVDEFVHKWI 145

[Close]

BLAST of Chy1G013340 vs. ExPASy TrEMBL
Match: A0A5D3DIG9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00380 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.7e-52
Identity = 96/146 (65.75%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 1   MMMKNVVVLWLVTATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLG 60
           MMM+NVVVLWL    L VE Q+SK       P RYF+HV N L+ Q +  HCQSKDDDLG
Sbjct: 1   MMMRNVVVLWLAMMVL-VEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLG 60

Query: 61  IQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVC 120
              LV++GDEF+WNF+ENFW TTLFWCRLEK DAYV+F+ FWPE+K+ WLR RCG+QG C
Sbjct: 61  YHRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTC 120

Query: 121 IWSASDDGIYLRNLPAENEEFVHKWI 147
           IW+A DDGIYLRN+P   +EFVHKWI
Sbjct: 121 IWTAKDDGIYLRNMPTNADEFVHKWI 145

[Close]

BLAST of Chy1G013340 vs. ExPASy TrEMBL
Match: A0A1S4E5F6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503421 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.7e-52
Identity = 96/146 (65.75%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 1   MMMKNVVVLWLVTATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLG 60
           MMM+NVVVLWL    L VE Q+SK       P RYF+HV N L+ Q +  HCQSKDDDLG
Sbjct: 1   MMMRNVVVLWLAMMVL-VEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLG 60

Query: 61  IQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVC 120
              LV++GDEF+WNF+ENFW TTLFWCRLEK DAYV+F+ FWPE+K+ WLR RCG+QG C
Sbjct: 61  YHRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTC 120

Query: 121 IWSASDDGIYLRNLPAENEEFVHKWI 147
           IW+A DDGIYLRN+P   +EFVHKWI
Sbjct: 121 IWTAKDDGIYLRNMPTNADEFVHKWI 145

[Close]

BLAST of Chy1G013340 vs. NCBI nr
Match: KAA0050597.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07843.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (733), Expect = 2.52e-97
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MMMKNVVVLWLVTATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLG 60
           MMM+NVVVLWL+ AT V EAQISK VVIR+PP RYFIHVANDLTNQDMF HCQSKDDDL 
Sbjct: 1   MMMRNVVVLWLLMATWVAEAQISKDVVIRVPPVRYFIHVANDLTNQDMFVHCQSKDDDLR 60

Query: 61  IQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVC 120
           IQHLV RGDEFRWNFKENFWKTTLFWCRLEKSDA+VSF+VFWPESKHHWLRDRCGSQGVC
Sbjct: 61  IQHLVHRGDEFRWNFKENFWKTTLFWCRLEKSDAHVSFNVFWPESKHHWLRDRCGSQGVC 120

Query: 121 IWSASDDGIYLRNLPAENEEFVHKWII 147
           IWSA DDGIYLRNLPA+NEEFVHKWII
Sbjct: 121 IWSAKDDGIYLRNLPAQNEEFVHKWII 147

[Close]

BLAST of Chy1G013340 vs. NCBI nr
Match: KAE8646229.1 (hypothetical protein Csa_016318 [Cucumis sativus])

HSP 1 Score: 290 bits (742), Expect = 1.29e-96
Identity = 134/149 (89.93%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MMMKNVVVLWLVTATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLG 60
           MMM+NVVVLWL+TATLV EAQIS KVVIRLPP RYFIHVANDLTNQDM AHCQSKDDDLG
Sbjct: 141 MMMRNVVVLWLMTATLVAEAQISNKVVIRLPPVRYFIHVANDLTNQDMSAHCQSKDDDLG 200

Query: 61  IQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVC 120
           IQHLV RGDEFRWNFKENFWKTTLFWCRLEKS+AYVSFDVFWPE KHHWLRDRCGS+GVC
Sbjct: 201 IQHLVHRGDEFRWNFKENFWKTTLFWCRLEKSNAYVSFDVFWPERKHHWLRDRCGSRGVC 260

Query: 121 IWSASDDGIYLRNLPAENEEFVHKWIITR 149
           IWSA DDGIYLRNLPA++EE VHKWI TR
Sbjct: 261 IWSARDDGIYLRNLPAQSEEIVHKWISTR 289

[Close]

BLAST of Chy1G013340 vs. NCBI nr
Match: XP_004139724.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 273 bits (697), Expect = 5.54e-92
Identity = 124/137 (90.51%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 13  TATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLGIQHLVRRGDEFR 72
           TATLV EAQIS KVVIRLPP RYFIHVANDLTNQDM AHCQSKDDDLGIQHLV RGDEFR
Sbjct: 2   TATLVAEAQISNKVVIRLPPVRYFIHVANDLTNQDMSAHCQSKDDDLGIQHLVHRGDEFR 61

Query: 73  WNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLR 132
           WNFKENFWKTTLFWCRLEKS+AYVSFDVFWPE KHHWLRDRCGS+GVCIWSA DDGIYLR
Sbjct: 62  WNFKENFWKTTLFWCRLEKSNAYVSFDVFWPERKHHWLRDRCGSRGVCIWSARDDGIYLR 121

Query: 133 NLPAENEEFVHKWIITR 149
           NLPA++EE VHKWI TR
Sbjct: 122 NLPAQSEEIVHKWISTR 138

[Close]

BLAST of Chy1G013340 vs. NCBI nr
Match: XP_008462119.2 (PREDICTED: uncharacterized protein LOC103500549 [Cucumis melo])

HSP 1 Score: 270 bits (689), Expect = 8.60e-91
Identity = 122/134 (91.04%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 14  ATLVVEAQISKKVVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLGIQHLVRRGDEFRW 73
           AT V EAQISK VVIR+PP RYFIHVANDLTNQDMF HCQSKDDDL IQHLV RGDEFRW
Sbjct: 2   ATWVAEAQISKDVVIRVPPVRYFIHVANDLTNQDMFVHCQSKDDDLRIQHLVHRGDEFRW 61

Query: 74  NFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRN 133
           NFKENFWKTTLFWCRLEKSDA+VSF+VFWPESKHHWLRDRCGSQGVCIWSA DDGIYLRN
Sbjct: 62  NFKENFWKTTLFWCRLEKSDAHVSFNVFWPESKHHWLRDRCGSQGVCIWSAKDDGIYLRN 121

Query: 134 LPAENEEFVHKWII 147
           LPA+NEEFVHKWII
Sbjct: 122 LPAQNEEFVHKWII 135

[Close]

BLAST of Chy1G013340 vs. NCBI nr
Match: XP_038896433.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 215 bits (548), Expect = 4.26e-69
Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 4   KNVVVLWLVTATLVVEAQISKKVVIRLPP---GRYFIHVANDLTNQDMFAHCQSKDDDLG 63
           +NV+ LWL+TA LV   QI +   + LPP    RY+IH+ N L+  DM  HCQSKDDDLG
Sbjct: 5   RNVLFLWLITAALVGADQILR---LTLPPPAVSRYYIHIVNGLSKFDMVVHCQSKDDDLG 64

Query: 64  IQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAYVSFDVFWPESKHHWLRDRCGSQGVC 123
             HLV  GD+++WNF  NFW+TTLFWC+LEK DAYVSF+VFWPESK  WLRDRCG+QG C
Sbjct: 65  YHHLVNHGDDYQWNFNVNFWETTLFWCKLEKPDAYVSFEVFWPESKSTWLRDRCGTQGTC 124

Query: 124 IWSASDDGIYLRNLPAENEEFVHKWIITR 149
           IW+A DDGIYLRN+PA  +EFVHKWI TR
Sbjct: 125 IWTAKDDGIYLRNMPANVDEFVHKWISTR 150

[Close]

BLAST of Chy1G013340 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 37  IHVANDL-TNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAY 96
           + V N L T + +F HC+SK+DDLG  +L  R + F WNF EN   +T FWC + K + +
Sbjct: 43  VTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFWCYMNKDNGH 102

Query: 97  VSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFVHKW 146
           ++ +VFW +     L  RCG +  CIW+A  DG+YL N  +  +    KW
Sbjct: 103 MNVNVFWDDV---ILFHRCGWKN-CIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Chy1G013340 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 88.2 bits (217), Expect = 6.1e-18
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 37  IHVANDL-TNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKSDAY 96
           + VAN L T + +F HC+SK++DLG  +L +  D F WNF EN   +TLFWC + K D +
Sbjct: 43  VTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCYMSKDDGH 102

Query: 97  VSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFVHKW 146
           ++  VFW +     L  RC  +  C+W+A +DG+YL N     +    KW
Sbjct: 103 MNVKVFWDDV---ILFHRCDWKN-CVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Chy1G013340 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 72.0 bits (175), Expect = 4.5e-13
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 26  VVIRLPPGRYFIHVANDLTNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLF 85
           V IR   G   + V N+L N+ +   C+SKDD+LG  H++R G   + NF +N W+ TLF
Sbjct: 13  VCIRNTFGISTLLVKNELNNKVLGVRCRSKDDNLG-DHILRVGQMTKNNFDDNVWRRTLF 72

Query: 86  WCRLEKS---DAYVSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFV 145
           WC L K      +V+FD +    +  W  D  G +   +W A +DGIY    P    +  
Sbjct: 73  WCNLWKGPDFKLHVAFDAY----RSQWKAD-IGPR--YLWIAREDGIYYTQHPETPPKKK 127

[Close]

BLAST of Chy1G013340 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 37  IHVANDL----TNQDMFAHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEKS 96
           +H+ NDL     + D+F  C+S   D+G +H V+ G  ++++ ++NFWKTTLFWC     
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMG-KHYVKYGKIYQFDIRDNFWKTTLFWCTFRHG 85

Query: 97  DAY---VSFDVFWPESKHHWLRDRCGSQGVCIWSASDDGIYLRNLPAENEEFVHKW 146
             Y     FDV+         +      G   W+A +DGIY R L       VH W
Sbjct: 86  PDYRTGQQFDVY-------EYKPGVAQGGTYEWTAREDGIYFR-LNQGTIHKVHNW 132

[Close]

BLAST of Chy1G013340 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10
Identity = 32/108 (29.63%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 33  GRYFIHVANDLTNQDMF-AHCQSKDDDLGIQHLVRRGDEFRWNFKENFWKTTLFWCRLEK 92
           G   + ++N L +  +   HC+SKDDDLG +H+++ G ++ + F +N W+TT F C++++
Sbjct: 25  GESKVVLSNQLEHSKLLKVHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQ 84

Query: 93  SDAYVSFDVFWPESKHH---------WLRDRCGSQGVCIWSASDDGIY 131
                      P  KHH         W +     +  C W   +DGIY
Sbjct: 85  G----------PNFKHHLDFVAYETSWSK---ALEASCKWIGREDGIY 118

The following BLAST results are available for this feature:

BLAST of Chy1G013340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	5.0e-17	40.00	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	8.6e-17	40.00	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
O23020	1.1e-08	32.63	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JLQ5	9.5e-08	26.72	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN92	2.8e-07	33.75	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of Chy1G013340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U887	2.5e-75	89.80	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A1S3CHP5	2.4e-70	91.04	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500549 PE=3 SV=1	[more]
A0A5A7UAS6	1.2e-53	65.75	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A5D3DIG9	1.7e-52	65.75	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00...	[more]
A0A1S4E5F6	1.7e-52	65.75	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503421 PE=3 SV=1	[more]

BLAST of Chy1G013340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050597.1	2.52e-97	89.80	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07843.1 pumilio-like...	[more]
KAE8646229.1	1.29e-96	89.93	hypothetical protein Csa_016318 [Cucumis sativus]	[more]
XP_004139724.1	5.54e-92	90.51	S-protein homolog 1-like [Cucumis sativus]	[more]
XP_008462119.2	8.60e-91	91.04	PREDICTED: uncharacterized protein LOC103500549 [Cucumis melo]	[more]
XP_038896433.1	4.26e-69	65.10	S-protein homolog 1-like [Benincasa hispida]	[more]

BLAST of Chy1G013340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.6e-18	40.00	S-protein homologue 1	[more]
AT4G29035.1	6.1e-18	40.00	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	4.5e-13	34.96	Plant self-incompatibility protein S1 family	[more]
AT1G28305.1	1.3e-12	33.62	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	6.1e-10	29.63	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 37..145 e-value: 2.0E-24 score: 86.1
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 26..147
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 26..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G013340.1	Chy1G013340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane