Chy1G013070 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G013070
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	S-protein homolog
Location	chrH01: 16748619 .. 16749056 (-)
RNA-Seq Expression	Chy1G013070
Synteny	Chy1G013070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAATGTGATCGTTTTATGGCTTGCCACAACGGTTTTGGTTGAGGGTCAAGTTTCGACGTGGTCGAAACCTCCGTCGCAACCTTCAAGGTATTTTGTTCACGTGGTAAATGGGCTAAGAAACCACAGTTGTGATGTGCATTGTCAATCTAAGGACGATGATTTGGGATATCATCATTTGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTCAAGGGAACAACCTTGTTTTGGTGTAGATTGAACAAGTTAGATGCGTATATCGCTTTTGAAAGCTTTTGGCCTAAGTCATCAAACTGTTGGCTTCATGATAGATGTGGGAATCAAGAAACTTGTATTTGGATTGCTAAAGACGATAGAATTTATTTGAGAAACATGTCCACTAATATTGATGAGTTTGTTCACAAATGGATCCCTAAGTAA

mRNA sequence

ATGAGGAATGTGATCGTTTTATGGCTTGCCACAACGGTTTTGGTTGAGGGTCAAGTTTCGACGTGGTCGAAACCTCCGTCGCAACCTTCAAGGTATTTTGTTCACGTGGTAAATGGGCTAAGAAACCACAGTTGTGATGTGCATTGTCAATCTAAGGACGATGATTTGGGATATCATCATTTGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTCAAGGGAACAACCTTGTTTTGGTGTAGATTGAACAAGTTAGATGCGTATATCGCTTTTGAAAGCTTTTGGCCTAAGTCATCAAACTGTTGGCTTCATGATAGATGTGGGAATCAAGAAACTTGTATTTGGATTGCTAAAGACGATAGAATTTATTTGAGAAACATGTCCACTAATATTGATGAGTTTGTTCACAAATGGATCCCTAAGTAA

Coding sequence (CDS)

ATGAGGAATGTGATCGTTTTATGGCTTGCCACAACGGTTTTGGTTGAGGGTCAAGTTTCGACGTGGTCGAAACCTCCGTCGCAACCTTCAAGGTATTTTGTTCACGTGGTAAATGGGCTAAGAAACCACAGTTGTGATGTGCATTGTCAATCTAAGGACGATGATTTGGGATATCATCATTTGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTCAAGGGAACAACCTTGTTTTGGTGTAGATTGAACAAGTTAGATGCGTATATCGCTTTTGAAAGCTTTTGGCCTAAGTCATCAAACTGTTGGCTTCATGATAGATGTGGGAATCAAGAAACTTGTATTTGGATTGCTAAAGACGATAGAATTTATTTGAGAAACATGTCCACTAATATTGATGAGTTTGTTCACAAATGGATCCCTAAGTAA

Protein sequence

MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKWIPK*

Homology

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BLAST of Chy1G013070 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 46/114 (40.35%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 30  SRYFVHVVNGL-RNHSCDVHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK 89
           S + V VVNGL    +  +HC+SK+DDLG  +L    + F WNF EN   +T FWC +NK
Sbjct: 39  SEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWNFGENMLHSTFFWCYMNK 98

Query: 90  LDAYIAFESFWPKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKW 143
            + ++    FW    +  L  RCG  + CIW AK D +YL N ++  D    KW
Sbjct: 99  DNGHMNVNVFW---DDVILFHRCG-WKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

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BLAST of Chy1G013070 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-14
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 30  SRYFVHVVNGL-RNHSCDVHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK 89
           S + V V NGL    +  +HC+SK++DLG  +L    D F WNF EN   +TLFWC ++K
Sbjct: 39  SEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCYMSK 98

Query: 90  LDAYIAFESFWPKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKW 143
            D ++  + FW    +  L  RC + + C+W AK+D +YL N +   D    KW
Sbjct: 99  DDGHMNVKVFW---DDVILFHRC-DWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

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BLAST of Chy1G013070 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-07
Identity = 32/104 (30.77%), Postives = 49/104 (47.12%), Query Frame = 0


Query: 47  VHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK-------LDAYIAFESFW 106
           +HC+SKDDDLG+ H+   G+ + W F  NF+ +TL++C  ++        D   A   F+
Sbjct: 61  IHCKSKDDDLGF-HIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERDFY 120

Query: 107 PKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKWI 144
                     RC N   C W AK D +Y  +       +  KW+
Sbjct: 121 ----------RCRN---CTWNAKKDSLYGYSNLPQTVTWFFKWL 150

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BLAST of Chy1G013070 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 32/104 (30.77%), Postives = 47/104 (45.19%), Query Frame = 0


Query: 47  VHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK-------LDAYIAFESFW 106
           VHC+S+DDD G+ H++  G  + W F  NF  +TL++C  ++        D Y A     
Sbjct: 46  VHCKSRDDDHGF-HILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRD-- 105

Query: 107 PKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKWI 144
             SS C           C W AK+D IY        +   +KW+
Sbjct: 106 --SSRC---------RNCTWEAKEDGIYGYGEIPKKNPLFYKWL 135

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BLAST of Chy1G013070 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-06
Identity = 31/88 (35.23%), Postives = 44/88 (50.00%), Query Frame = 0


Query: 47  VHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK-------LDAYIAFESFW 106
           +HC+S+DDDLG+H L   G+ F W F  NF  +TL++C  ++        + Y A   F+
Sbjct: 60  IHCKSRDDDLGFHILAK-GELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRDFY 119

Query: 107 PKSSNCWLHDRCGNQETCIWIAKDDRIY 128
                     RC N   C W A+ D IY
Sbjct: 120 ----------RCAN---CTWKAEKDGIY 133

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BLAST of Chy1G013070 vs. ExPASy TrEMBL
Match: A0A5A7U8H6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00220 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69
Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV++LWLATTV+VEGQVS W KPP QPSRYFV+VVNGL  HS DVHCQSKDDDLGYHH
Sbjct: 3   MRNVVILWLATTVVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHH 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LVNHGD FQWNFEENF GTTLFWCRL K DAY+AFESFWP+S+N WL DRCGNQ TC+WI
Sbjct: 63  LVNHGDYFQWNFEENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQGTCVWI 122

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 146
           AKDD IYLRN+  N+DE VHKWI K
Sbjct: 123 AKDDGIYLRNIPVNVDELVHKWISK 147

[Close]

BLAST of Chy1G013070 vs. ExPASy TrEMBL
Match: A0A1S3CGQ1 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500539 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69
Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV++LWLATTV+VEGQVS W KPP QPSRYFV+VVNGL  HS DVHCQSKDDDLGYHH
Sbjct: 1   MRNVVILWLATTVVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHH 60

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LVNHGD FQWNFEENF GTTLFWCRL K DAY+AFESFWP+S+N WL DRCGNQ TC+WI
Sbjct: 61  LVNHGDYFQWNFEENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQGTCVWI 120

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 146
           AKDD IYLRN+  N+DE VHKWI K
Sbjct: 121 AKDDGIYLRNIPVNVDELVHKWISK 145

[Close]

BLAST of Chy1G013070 vs. ExPASy TrEMBL
Match: A0A5A7U930 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00230 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.9e-68
Identity = 119/146 (81.51%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV+VLWLAT VLVEGQV  WS+PP Q SRYFVHVVNGL  H+ DVHCQSKDDDLGYH 
Sbjct: 3   MRNVVVLWLATMVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHC 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQ-ETCIW 120
           LVNHGDDFQWNF ENF GTTLFWCRL KLDAY+AFESFWP+S N WL  RCGNQ  TCIW
Sbjct: 63  LVNHGDDFQWNFRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIW 122

Query: 121 IAKDDRIYLRNMSTNIDEFVHKWIPK 146
            AKDD IYLRN+STN+DEFVHKWIPK
Sbjct: 123 TAKDDGIYLRNLSTNVDEFVHKWIPK 148

[Close]

BLAST of Chy1G013070 vs. ExPASy TrEMBL
Match: A0A5A7UAS6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00440 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.3e-68
Identity = 115/145 (79.31%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV+VLWLAT VLVEG+VS W KPP +PSRYFVHVVNGL   S DVHCQSK+DDLGYHH
Sbjct: 3   MRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHH 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LVN GD++QWNFEEN  GTTLFWCRL K DAY+AFESFWP++ N WL DRCGNQ TCIW 
Sbjct: 63  LVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWT 122

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 146
           AKDD IYLRNM TN+DEFVHKWIPK
Sbjct: 123 AKDDGIYLRNMPTNVDEFVHKWIPK 147

[Close]

BLAST of Chy1G013070 vs. ExPASy TrEMBL
Match: A0A5D3DIG9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00380 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 116/145 (80.00%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV+VLWLA  VLVEGQVS WSKPP  PSRYFVHVVNGL   S DVHCQSKDDDLGYH 
Sbjct: 3   MRNVVVLWLAMMVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHR 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LV  GD+FQWNFEENF GTTLFWCRL K DAY+AFESFWP++ N WL  RCGNQ TCIW 
Sbjct: 63  LVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTCIWT 122

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 146
           AKDD IYLRNM TN DEFVHKWIPK
Sbjct: 123 AKDDGIYLRNMPTNADEFVHKWIPK 147

[Close]

BLAST of Chy1G013070 vs. NCBI nr
Match: XP_008462110.1 (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 269 bits (688), Expect = 1.47e-90
Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV++LWLATTV+VEGQVS W KPP QPSRYFV+VVNGL  HS DVHCQSKDDDLGYHH
Sbjct: 1   MRNVVILWLATTVVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHH 60

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LVNHGD FQWNFEENF GTTLFWCRL K DAY+AFESFWP+S+N WL DRCGNQ TC+WI
Sbjct: 61  LVNHGDYFQWNFEENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQGTCVWI 120

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 145
           AKDD IYLRN+  N+DE VHKWI K
Sbjct: 121 AKDDGIYLRNIPVNVDELVHKWISK 145

[Close]

BLAST of Chy1G013070 vs. NCBI nr
Match: KAA0050687.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07750.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 269 bits (688), Expect = 1.57e-90
Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV++LWLATTV+VEGQVS W KPP QPSRYFV+VVNGL  HS DVHCQSKDDDLGYHH
Sbjct: 3   MRNVVILWLATTVVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHH 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LVNHGD FQWNFEENF GTTLFWCRL K DAY+AFESFWP+S+N WL DRCGNQ TC+WI
Sbjct: 63  LVNHGDYFQWNFEENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQGTCVWI 122

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 145
           AKDD IYLRN+  N+DE VHKWI K
Sbjct: 123 AKDDGIYLRNIPVNVDELVHKWISK 147

[Close]

BLAST of Chy1G013070 vs. NCBI nr
Match: KAA0050686.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07751.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (677), Expect = 7.72e-89
Identity = 119/146 (81.51%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV+VLWLAT VLVEGQV  WS+PP Q SRYFVHVVNGL  H+ DVHCQSKDDDLGYH 
Sbjct: 3   MRNVVVLWLATMVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHC 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQ-ETCIW 120
           LVNHGDDFQWNF ENF GTTLFWCRL KLDAY+AFESFWP+S N WL  RCGNQ  TCIW
Sbjct: 63  LVNHGDDFQWNFRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIW 122

Query: 121 IAKDDRIYLRNMSTNIDEFVHKWIPK 145
            AKDD IYLRN+STN+DEFVHKWIPK
Sbjct: 123 TAKDDGIYLRNLSTNVDEFVHKWIPK 148

[Close]

BLAST of Chy1G013070 vs. NCBI nr
Match: KAA0050661.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07770.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (675), Expect = 1.51e-88
Identity = 115/145 (79.31%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV+VLWLAT VLVEG+VS W KPP +PSRYFVHVVNGL   S DVHCQSK+DDLGYHH
Sbjct: 3   MRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHH 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LVN GD++QWNFEEN  GTTLFWCRL K DAY+AFESFWP++ N WL DRCGNQ TCIW 
Sbjct: 63  LVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWT 122

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 145
           AKDD IYLRNM TN+DEFVHKWIPK
Sbjct: 123 AKDDGIYLRNMPTNVDEFVHKWIPK 147

[Close]

BLAST of Chy1G013070 vs. NCBI nr
Match: XP_016903452.1 (PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo] >KAA0040491.1 pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK23471.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 260 bits (664), Expect = 7.17e-87
Identity = 116/145 (80.00%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 1   MRNVIVLWLATTVLVEGQVSTWSKPPSQPSRYFVHVVNGLRNHSCDVHCQSKDDDLGYHH 60
           MRNV+VLWLA  VLVEGQVS WSKPP  PSRYFVHVVNGL   S DVHCQSKDDDLGYH 
Sbjct: 3   MRNVVVLWLAMMVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHR 62

Query: 61  LVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCWLHDRCGNQETCIWI 120
           LV  GD+FQWNFEENF GTTLFWCRL K DAY+AFESFWP++ N WL  RCGNQ TCIW 
Sbjct: 63  LVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQGTCIWT 122

Query: 121 AKDDRIYLRNMSTNIDEFVHKWIPK 145
           AKDD IYLRNM TN DEFVHKWIPK
Sbjct: 123 AKDDGIYLRNMPTNADEFVHKWIPK 147

[Close]

BLAST of Chy1G013070 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 84.3 bits (207), Expect = 8.6e-17
Identity = 46/114 (40.35%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 30  SRYFVHVVNGL-RNHSCDVHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK 89
           S + V VVNGL    +  +HC+SK+DDLG  +L    + F WNF EN   +T FWC +NK
Sbjct: 39  SEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWNFGENMLHSTFFWCYMNK 98

Query: 90  LDAYIAFESFWPKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKW 143
            + ++    FW    +  L  RCG  + CIW AK D +YL N ++  D    KW
Sbjct: 99  DNGHMNVNVFW---DDVILFHRCG-WKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Chy1G013070 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.3 bits (199), Expect = 7.3e-16
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 30  SRYFVHVVNGL-RNHSCDVHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK 89
           S + V V NGL    +  +HC+SK++DLG  +L    D F WNF EN   +TLFWC ++K
Sbjct: 39  SEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCYMSK 98

Query: 90  LDAYIAFESFWPKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKW 143
            D ++  + FW    +  L  RC + + C+W AK+D +YL N +   D    KW
Sbjct: 99  DDGHMNVKVFW---DDVILFHRC-DWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Chy1G013070 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 58.9 bits (141), Expect = 3.9e-09
Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 47  VHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK-------LDAYIAFESFW 106
           VHC+SKDDDLG  H++  G D+++ F +N   TT F C++++       LD ++A+E+ W
Sbjct: 43  VHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLD-FVAYETSW 102

Query: 107 PKSSNCWLHDRCGNQETCIWIAKDDRIY 128
            K+           + +C WI ++D IY
Sbjct: 103 SKAL----------EASCKWIGREDGIY 118

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BLAST of Chy1G013070 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 32/104 (30.77%), Postives = 49/104 (47.12%), Query Frame = 0


Query: 47  VHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNK-------LDAYIAFESFW 106
           +HC+SKDDDLG+ H+   G+ + W F  NF+ +TL++C  ++        D   A   F+
Sbjct: 61  IHCKSKDDDLGF-HIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERDFY 120

Query: 107 PKSSNCWLHDRCGNQETCIWIAKDDRIYLRNMSTNIDEFVHKWI 144
                     RC N   C W AK D +Y  +       +  KW+
Sbjct: 121 ----------RCRN---CTWNAKKDSLYGYSNLPQTVTWFFKWL 150

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BLAST of Chy1G013070 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 51.6 bits (122), Expect = 6.2e-07
Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 47  VHCQSKDDDLGYHHLVNHGDDFQWNFEENFKGTTLFWCRLNKLDAYIAFESFWPKSSNCW 106
           VHC+SK++D+G  +L   G+   ++F+ NF GTT FWC L K   Y  +       +   
Sbjct: 42  VHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQA-IG 101

Query: 107 LHDRCGNQETCIWIAKDDRIYLRNMS 133
           L  + G+     W+A+DD IY    S
Sbjct: 102 LFAKDGSSYN--WLARDDGIYFHKDS 123

The following BLAST results are available for this feature:

BLAST of Chy1G013070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.2e-15	40.35	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.0e-14	38.60	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9FI84	6.0e-07	30.77	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
F2Q9V4	1.3e-06	30.77	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
P0DN92	3.9e-06	35.23	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of Chy1G013070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8H6	2.6e-69	80.69	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A1S3CGQ1	2.6e-69	80.69	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500539 PE=3 SV=1	[more]
A0A5A7U930	4.9e-68	81.51	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A5A7UAS6	8.3e-68	79.31	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A5D3DIG9	1.6e-66	80.00	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00...	[more]

BLAST of Chy1G013070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462110.1	1.47e-90	80.69	PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo]	[more]
KAA0050687.1	1.57e-90	80.69	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07750.1 pumilio-like...	[more]
KAA0050686.1	7.72e-89	81.51	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07751.1 pumilio-like...	[more]
KAA0050661.1	1.51e-88	79.31	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07770.1 pumilio-like...	[more]
XP_016903452.1	7.17e-87	80.00	PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo] >KAA0040491.1 pum...	[more]

BLAST of Chy1G013070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	8.6e-17	40.35	S-protein homologue 1	[more]
AT4G29035.1	7.3e-16	38.60	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	3.9e-09	35.23	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	4.3e-08	30.77	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	6.2e-07	34.88	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 34..142 e-value: 9.9E-21 score: 74.2
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 29..143
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 29..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G013070.1	Chy1G013070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane