Chy1G012290 (gene) Cucumber (hystrix) v1

Overview
NameChy1G012290
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger BED domain-containing protein DAYSLEEPER-like
LocationchrH01: 14637489 .. 14642065 (-)
RNA-Seq ExpressionChy1G012290
SyntenyChy1G012290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTATCTAATGATAATGAGTTAGAACAAGGTGGTTCAACTCCAACATCTATGAACATGAGTGAATCAACTCCAATGAATAGTGCTTCAAGTGGTTATGATCAATTTACACCAATTACATCAGATATTAATGATAATGAGAAAATACTAAAAAGTAGTAAATTAACATCAGTTGTATGGAATCATTATAAAAGACAAAAAATAAATGATACTATGAAAGAAATATGTAATTATTGTGAAAAAAAATTAGGAGAATCTAAAAATGGAATAAAACATTTGATCATTTCAAAATTTGTCCATTACATAGACAAAGAGACATTAAGCAATCGTGCTTGAAACCCACTAAAACCAATGAGGGAAAACCCTCTTTGATTATGAAGCTTCTAGAGGAGACCTTGCGTGTGCCATAATTTTACATGAATATCCTATCAATATGGTTGAACACAAAGGATTTAGAAAGTTTTTTAGTGGTGTTCAACCAATGTTAAAGATGATTTCAAGAAGCACAATGAGGAGAGATATAATAAATATTTATGAAGAAGAGAGAATTAAAACAACAAAATTTTTGAAAAGCAACAAAAGTAGGATTGCCCTTACTATACACATGTGGACTGCGACAACTCAGAAGAAGGGATGCATGGTGTCACGGACATATTTTTCAAAAGTGTGTTTACCTTTGGTTATATGCTCCGATTAGCTCCGTTTGTCGAAGGGCTGAAGCCATGGGCAAGGACTAAACTGTATGAGCAGAAAGTTCAAGATCTCACGTCAGCCTATGCAATAGCTGAACGTTTGTTTGATTTGTCTAGTGACTCTCATGACGCGAGACGTCATCAAAGCTCTTCACCTGGAAGAGACAGAAACAGTTGACCGAATACTCCCAAGGCTGCCAGTGAAAACAGAAGTCCCGGTAGAGACCGCAAGCCTTCCCAGTCCAACACAAGGGACACTTGGAAAAGACGTGATAGTACAAACACGTCGAATCGTCCCATCAGTTGCTATATATGTAACGGGCCACATCTGGCAAGGGAATGCCCGGATTGATCGGCCTTCTATGCCTTTCAAGCCTCTTTGGCTGCGGATTCAGAGGACCAACTGAGTCAACCAAAGAAGGAAGATGGGCAAGTGAAGGAAATCCAAAATGTCAGAGTGGGAGCCATAAGACTCTTGTCGCCCCTTCAGAAGAAAGCGGGGGAGACAAGTGGACGTACGAAAGGGGGTCTGATATATGTTGACACCTAGATGAACCGAAAGCGTGCAAGGAGCACTATGGTCGACTCTGGTGCAACTCATAATTTTATAACGGTGGCTGAAGCTAGACGACTAAACCTTCATTGGAAGAAGGATACGGGAAAGATGAAGGCCGTGAACTCTACAGCTCTACCCGTCGTTGGAGTAGTGAAACGAGCGGTGATACAGTTGGGAGGATGGAGCGGTTTCGTTGATTTCGTAGTTGTAGGCATGGATGACTTTGATATAGTTCTCGGAATGGAATTCCTTCTCGAACATCAAGTGATCATGATGCCTGCAGCTAGATGTCTGGTGATCACGGGGTCTACCCCCACCGTTGTGCAGACAGACCTTCGGCAACCCAAAGGATTGAGAATGATCTCGGCCATGCAACTGAGGAAGGGTCGTATTCAGGAAGACACAAGGTGTTTCGTGGAGAAATGTTGTGATGGGAAACGTGATAGTTTGCCCATGTCAGAATTGCCTACGAAGAGTAATTGTCGTATGGCGCAGTTAGAGTCAACTGGACTCCGGAGACAGTCACAGAGATTGTCGAGTGCAAGATTCACTAGACTTGCAAAAGCTCCGTATGAAGATCAAGCCATCTTACGGAAGGAAGAGAATGGACGGTTGTGTGCCGACAACCGTGTCCTAAAGCAAGCCCCGAGGAGAGGGCCAACTTTTGGGTCCGTGAGTGGGACTCAACCTGTTGAAGCATATGTTAAGGCGTCTAATCATGCGTCGGGTGGCGTCCTAGTGCAGAGTGGACACCCCGTCGCATCTGAGAGTCTGAAGCAGAGTGTGGCAGAAAGCACATATACAATGTTTGGGAAAGGTACGCTTGCCATGGTACGCAGTCAGAAGGATGTGAAACTGTATTCACAGGGATCTACCCGTGTTAGAGAGATGAACCACACAGTTACCAGTCGCCTCGGTACTTAGTTGGAACTGACTTCAAGTCAAGCTAAGTGGCAAGGAGGCCTATTTGATCTTGATTTTGGGTCAGAACGTAGGAAAGGAGTGAGAAATCGGTCAACTGATGCCCTTAATCGGAGTAATGACCATGCGGTTCCGTGCATGTTGGCCCGTATACAGGCGTGTCAAGTGGACGGCCTAATGCTGGACGCGTTAAAGGAATCCTTGAAAAATTACTCTGTGGCTCCGGATGGTGTGAGTTTGGCGAGGGTCAGTGGAACAAGACAAAAGAAGGGGATCCAGTTGTGGAAGGAGACCAGATGTTGTGTCAGTGGCGTGTTGAGTTCTACAGCAGGTGGAAGACGGGTCGAGATTGTGGGTGGCAAACAACCTGTACTGTCGCGCCTTATTGACCCCTTTGGTGTCGATAAGAGTCCTCAGACTCGCGAGATTAATAAGAGATGGAGGCAAGAACCAGACATTGCTCGAATCGGTCTATAGAGAGTCTTGAAGCGACCGAAAAGATGCGCAGATGGGAAGCATCAACCTTTGGACCTTCGCATGGAAGGTCAAGTCATCGCGAAGTTGCGACCTGAACAAACTCGGTTACGAAGATGCAAGGATCATCACCTCCTGAGAGGACACGAGGAACTAACCGAAGTTGAAGAAGTCCTTGCGAAGGAAGTGAGGAAAAAGAAGAAGACCCACAGAGAGGATACACAGTTCTTGGCGAACCGAAAGAGCCTCCTCGTGGAAGAAGCATGCAGAAGACGTACCAATGACCGTGAAGTGTGGAAGCAGAAGATTGAAGGATTCCAGCTTTGAGGGAGTGTGTCACGGAAATATTTTTCCAAAGTGTGTTTACCTTTGGTTATATGCTCCGATTAGCTCACATTTATCTTATCTTTAAGCACCATATTTAGTTTAGGCATTTGCATTTCATTTTAAGTCATAAAGCTTGGGTGTGACGTTTCGGCATTTTCATATGCAAGCCTACCAGAGCTGAAAATGTTCAAAATGTACTATAGGGGAGGCATACCAGTTGAATCCCCGCCCAAGCATTAGTTGTACTCTTTGCAAACAACCCTTTTTCCTTGCAATTGACAGTCTTTAATGCTTATTGTAACGTCTATTTCAATGTATTTCTTTCTTTCCAGCGTTTTATAAATAAATTTCCCAAGAATGCTAAGGAAGGTTACGACATACGTCGACATTACCCACAACTTTCGGATTTTGATCGGCTGACTTGTTCATCGAATTAGAATAAGTGTCGCATAATCGTCCGTCTCAAGGTTGGAACGCTACGATTGTGACACATGGCAATCACTGCACATTTTATTGATGATTCTTGGGTCCTACAAAGTAGACTTTTGAGGTAATTTAATTTAAATATTTCATCTTATAATCTATTTTTTATTCAACATTTAGTAGTTTCCATTTTAACATATTATTACGTAATAATAGGTTTGTACATGTGCCACATCCACATACTAGACATTTACTTGTTGAAGCATTAATAGAGTGTATATTCAATTGGAAAATAGATTGTAAATTGTCCACTTTAACAGTAGATAATTGTTCTACAAATGATGCAATGGTTGACATTTTATTAAGAAAGTTAGATTTAAGGACACTTCAGTTGTGTAGAAGTTTGTTTCATATTCGTTGTTGTGCACACATTTTGAATTTGATAGTGAAAGAAGGTTTGACTGTAATTTCTGATGGTATAGAGAAGATTACAGGTATGGTTCAAAAAGGAAAGAAAAATTTGAGGAAGGAGTTCGTCAATTACAAATTTCATGCACTAAAAAACTATGTCTTGGTTGTGTTACAAGATGGAATTCAACATATGTGATGCTCAAAATTGCTTTGGAATACAAAGATGTGTTTCCTCGTCTAAAACAACGTGAACCACTATACACTTGTCTTCCTTCAAAGTCATATTGGGATTTTGCAAAAGAAATGTGTAATAGATTAGAACAATTCTACTTGATGACTGAATTATTTTTTGGATCGAATTATCCAACCTCTAATGTTTTTTTGAAGAAGTTTGTGAAATTAGGTTGAAACTTTCTAATTGGCTTAATTCTGATGTTAAGGAGATACAAGTAATGGCATTAAGAATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTTATGGTTTGTTGGCAATAGCTACAGTATTAGATCCTAGATTCAAGATGAGATTGATCGAGTTTTATTTTTCTCAAATCTATGGATCTCATTATACTGCAGAAATTGAACATGTTAGAGAATTGTGTTGTGATTTGATGAAGTTTTATACTTCAAAATCAAGTATAATAGAAGAACCTCAACGTTCTACATCTACATCTTATTCAACTTCAAAGCAAGATGGAAGTAGTAGTAAAACTTCTCTTGCTAATAGGAAAGATCGCCACCTCAAG

mRNA sequence

ATGACTCTATCTAATGATAATGAGTTAGAACAAGGTGGTTCAACTCCAACATCTATGAACATGAGTGAATCAACTCCAATGAATAGTGCTTCAAGTGGTTATGATCAATTTACACCAATTACATCAGATATTAATGATAATGAGAAAATACTAAAAAGTAAAGTTTGTGAAATTAGGTTGAAACTTTCTAATTGGCTTAATTCTGATGTTAAGGAGATACAAGTAATGGCATTAAGAATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTTATGGTTTGTTGGCAATAGCTACAGTATTAGATCCTAGATTCAAGATGAGATTGATCGAGTTTTATTTTTCTCAAATCTATGGATCTCATTATACTGCAGAAATTGAACATGTTAGAGAATTGTGTTGTGATTTGATGAAGTTTTATACTTCAAAATCAAGTATAATAGAAGAACCTCAACGTTCTACATCTACATCTTATTCAACTTCAAAGCAAGATGGAAGTAGTAGTAAAACTTCTCTTGCTAATAGGAAAGATCGCCACCTCAAG

Coding sequence (CDS)

ATGACTCTATCTAATGATAATGAGTTAGAACAAGGTGGTTCAACTCCAACATCTATGAACATGAGTGAATCAACTCCAATGAATAGTGCTTCAAGTGGTTATGATCAATTTACACCAATTACATCAGATATTAATGATAATGAGAAAATACTAAAAAGTAAAGTTTGTGAAATTAGGTTGAAACTTTCTAATTGGCTTAATTCTGATGTTAAGGAGATACAAGTAATGGCATTAAGAATGATTTCCAAGTTTGAAAAGTATTGGAGTGTGATTTATGGTTTGTTGGCAATAGCTACAGTATTAGATCCTAGATTCAAGATGAGATTGATCGAGTTTTATTTTTCTCAAATCTATGGATCTCATTATACTGCAGAAATTGAACATGTTAGAGAATTGTGTTGTGATTTGATGAAGTTTTATACTTCAAAATCAAGTATAATAGAAGAACCTCAACGTTCTACATCTACATCTTATTCAACTTCAAAGCAAGATGGAAGTAGTAGTAAAACTTCTCTTGCTAATAGGAAAGATCGCCACCTCAAG

Protein sequence

MTLSNDNELEQGGSTPTSMNMSESTPMNSASSGYDQFTPITSDINDNEKILKSKVCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCDLMKFYTSKSSIIEEPQRSTSTSYSTSKQDGSSSKTSLANRKDRHLK
Homology
[Close]
BLAST of Chy1G012290 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-10
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = 0 

Query: 56  CEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFS 115
           CEI+  +  W   +   I+ MA+ M  KFEKYW V    LA+A  LDPR+K  LIEFY  
Sbjct: 538 CEIKDLIDQWCVHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMK 597

Query: 116 QIYGSHYTAEIEHVRELCCDLMKFYTSKSSIIEEPQRSTSTS 158
           + +G  Y   ++    +   L +FY+S S    + + +T+ S
Sbjct: 598 KFHGDSYKVHVDDFVRVIRKLYQFYSSCSPSAPKTKTTTNDS 639

[Close]
BLAST of Chy1G012290 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-10
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = 0 

Query: 56  CEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFS 115
           CEI+  +  W   +   I+ MA+ M  KFEKYW V    LA+A  LDPR+K  LIEFY  
Sbjct: 507 CEIKDLIDQWCCHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMK 566

Query: 116 QIYGSHYTAEIEHVRELCCDLMKFYTSKSSIIEEPQRSTSTS 158
           + +G  Y   ++    +   L +FY+S S    + + +T+ S
Sbjct: 567 KFHGDSYKVHVDDFVRVIRKLYQFYSSCSPSAPKTKTTTNDS 608

[Close]
BLAST of Chy1G012290 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09
Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 0 

Query: 34  YDQFTPITSDINDNEKILKSKVCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYG 93
           YD    I +  N    +   +  +++L+LSN    +      +A  M  +F+KYW     
Sbjct: 454 YDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGHEDPVFSSIAKDMHERFDKYWKDCNL 513

Query: 94  LLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCDLMKFYTSK 144
           +LAIA V+DPRFKM+L+EF +S+IYG      ++ V +   +L K Y ++
Sbjct: 514 VLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYKEYVAQ 563

[Close]
BLAST of Chy1G012290 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.0e-09
Identity = 35/110 (31.82%), Postives = 58/110 (52.73%), Query Frame = 0 

Query: 34  YDQFTPITSDINDNEKILKSKVCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYG 93
           YD    I +  N    +   +  +++L+LSN    +      +A  M  +F+KYW     
Sbjct: 454 YDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGREDPVFSSIAKDMHERFDKYWKDCNL 513

Query: 94  LLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCDLMKFYTSK 144
           +LAIA V+DPRFKM+L+EF +S+IYG      ++ V +   +L   Y ++
Sbjct: 514 VLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYNEYVAQ 563

[Close]
BLAST of Chy1G012290 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 31/91 (34.07%), Postives = 55/91 (60.44%), Query Frame = 0 

Query: 58  IRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFSQI 117
           ++L+L N +      I+ + + +  KF+KYW     +LAIA  +DPRFKM+++EF +S+I
Sbjct: 447 LQLELQNGMAHGDDVIRGIVIGIHEKFDKYWKDCNVVLAIAVAMDPRFKMKMVEFAYSKI 506

Query: 118 YGSHYTAE-IEHVRELCCDLMKFYTSKSSII 148
           YG    A+ ++ V +   DL K Y ++  ++
Sbjct: 507 YGPTDAAKYVKLVDDAILDLYKEYAAQPELL 537

[Close]
BLAST of Chy1G012290 vs. ExPASy TrEMBL
Match: A0A5D3DHK7 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001630 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.9e-39
Identity = 88/106 (83.02%), Postives = 93/106 (87.74%), Query Frame = 0 

Query: 76  MALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCD 135
           MA RMISKFEKYWSVI+  LAIAT LDP+FKMRLIEFYF QIY SHY AEI+ VRELCCD
Sbjct: 1   MASRMISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCD 60

Query: 136 LMKFYTSKSSIIEEPQRSTSTSYSTSKQDGSSSKTSLANRKDRHLK 182
           LM FY+SKS  IEEPQRSTST YSTSK+DGSSSKTSL NRKDRHLK
Sbjct: 61  LMTFYSSKSRTIEEPQRSTSTPYSTSKRDGSSSKTSLVNRKDRHLK 106

[Close]
BLAST of Chy1G012290 vs. ExPASy TrEMBL
Match: A0A0A0K403 (DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 0 

Query: 83  KFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCDLMKFYTS 142
           ++EKYWSVI+G+LAIATVLDPRFKMRLIEFYF QIYGSHY  EIE VRELCCDLMK Y+S
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 143 KSSIIEEPQRSTSTSYSTSKQDGSSSKTSLANR 176
           KSSIIEEP    STSYSTSK+DGSSSKTSLAN+
Sbjct: 66  KSSIIEEP---PSTSYSTSKRDGSSSKTSLANK 95

[Close]
BLAST of Chy1G012290 vs. ExPASy TrEMBL
Match: A0A5C7IUL5 (BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20
Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = 0 

Query: 56  CEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFS 115
           C IRL LS+WL S+ + I+ MA++MI  FEKYW VI+G++A+AT+LDPR+KMRLIEFYF 
Sbjct: 419 CVIRLSLSDWLKSENEVIKEMAVKMIENFEKYWDVIHGVMAMATMLDPRYKMRLIEFYFP 478

Query: 116 QIYGSHYTAEIEHVRELCCDLMKFYTSK-SSIIEEPQRSTSTSYSTSKQDGSSSK 170
            I+G++Y   +E +R+LC DL+K Y  K  S  E    S S+  S  +   +SSK
Sbjct: 479 SIFGANYMTHLESIRKLCLDLVKEYELKFKSGDENSIHSNSSLASHLEMPDNSSK 533

[Close]
BLAST of Chy1G012290 vs. ExPASy TrEMBL
Match: A0A5C7H408 (DUF4413 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024185 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-19
Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 0 

Query: 54  KVCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFY 113
           KVCE+RL L   L S+V+EI VMA  M+ KF+KYW VI+GLLAIAT+LDPRFK++LIE+Y
Sbjct: 65  KVCEMRLLLDECLLSNVEEINVMAANMVGKFDKYWMVIHGLLAIATILDPRFKLKLIEYY 124

Query: 114 FSQIYGSHYTAEIEHVRELCCDLMKFYTSKSS 146
           F +IY +     I+ VR++C DL+  Y  K+S
Sbjct: 125 FPKIYVNDSEKHIDRVRKMCYDLVNEYQVKNS 156

[Close]
BLAST of Chy1G012290 vs. ExPASy TrEMBL
Match: A0A5C7HKE4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018687 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-19
Identity = 57/115 (49.57%), Postives = 75/115 (65.22%), Query Frame = 0 

Query: 55  VCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYF 114
           +CEIRL +S WL S   EI+ +A   I+KFEKYW+VI G++A+ATVLDPRFKM+++EFYF
Sbjct: 273 LCEIRLLMSKWLTSRYDEIKSIASNAIAKFEKYWNVINGMMAVATVLDPRFKMKVLEFYF 332

Query: 115 SQIYGSHYTAEIEHVRELCCDLMKFYTSKSSIIEEPQRSTSTSYSTSKQDGSSSK 170
             IYG + + E+E VR LC  L+K Y   S   +EP     +S S S    S  K
Sbjct: 333 PHIYGDNSSFEMEKVRRLCYGLVKEYQLNSKTGKEPCDRIDSSCSPSSMSISKDK 387

[Close]
BLAST of Chy1G012290 vs. NCBI nr
Match: TYK23151.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 169 bits (427), Expect = 1.44e-49
Identity = 88/106 (83.02%), Postives = 93/106 (87.74%), Query Frame = 0 

Query: 76  MALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCD 135
           MA RMISKFEKYWSVI+  LAIAT LDP+FKMRLIEFYF QIY SHY AEI+ VRELCCD
Sbjct: 1   MASRMISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCD 60

Query: 136 LMKFYTSKSSIIEEPQRSTSTSYSTSKQDGSSSKTSLANRKDRHLK 181
           LM FY+SKS  IEEPQRSTST YSTSK+DGSSSKTSL NRKDRHLK
Sbjct: 61  LMTFYSSKSRTIEEPQRSTSTPYSTSKRDGSSSKTSLVNRKDRHLK 106

[Close]
BLAST of Chy1G012290 vs. NCBI nr
Match: XP_038884881.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 161 bits (407), Expect = 1.36e-45
Identity = 76/97 (78.35%), Postives = 88/97 (90.72%), Query Frame = 0 

Query: 54  KVCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFY 113
           +VCEIRL+LS WLNSDV+E+QVMA RMI+KFEKYWSVI+G+LAIATVLDPRFKMRLI+FY
Sbjct: 174 EVCEIRLELSKWLNSDVEEVQVMASRMIAKFEKYWSVIHGVLAIATVLDPRFKMRLIQFY 233

Query: 114 FSQIYGSHYTAEIEHVRELCCDLMKFYTSKSSIIEEP 150
           F QIYG H+T EI+ VR+LCCDLMKFY+S S  IEEP
Sbjct: 234 FPQIYGFHHTVEIKRVRDLCCDLMKFYSSNSRTIEEP 270

[Close]
BLAST of Chy1G012290 vs. NCBI nr
Match: KGN44253.1 (hypothetical protein Csa_016011 [Cucumis sativus])

HSP 1 Score: 148 bits (373), Expect = 2.77e-42
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 0 

Query: 83  KFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCDLMKFYTS 142
           ++EKYWSVI+G+LAIATVLDPRFKMRLIEFYF QIYGSHY  EIE VRELCCDLMK Y+S
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 143 KSSIIEEPQRSTSTSYSTSKQDGSSSKTSLANR 175
           KSSIIEEP    STSYSTSK+DGSSSKTSLAN+
Sbjct: 66  KSSIIEEPP---STSYSTSKRDGSSSKTSLANK 95

[Close]
BLAST of Chy1G012290 vs. NCBI nr
Match: TXG51661.1 (hypothetical protein EZV62_024185 [Acer yangbiense])

HSP 1 Score: 106 bits (265), Expect = 7.28e-25
Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 0 

Query: 54  KVCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFY 113
           KVCE+RL L   L S+V+EI VMA  M+ KF+KYW VI+GLLAIAT+LDPRFK++LIE+Y
Sbjct: 65  KVCEMRLLLDECLLSNVEEINVMAANMVGKFDKYWMVIHGLLAIATILDPRFKLKLIEYY 124

Query: 114 FSQIYGSHYTAEIEHVRELCCDLMKFYTSKSS 145
           F +IY +     I+ VR++C DL+  Y  K+S
Sbjct: 125 FPKIYVNDSEKHIDRVRKMCYDLVNEYQVKNS 156

[Close]
BLAST of Chy1G012290 vs. NCBI nr
Match: TXG73027.1 (hypothetical protein EZV62_001606 [Acer yangbiense])

HSP 1 Score: 110 bits (275), Expect = 2.42e-24
Identity = 50/88 (56.82%), Postives = 69/88 (78.41%), Query Frame = 0 

Query: 56  CEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYGLLAIATVLDPRFKMRLIEFYFS 115
           C IRL LS+WL S+ + I+ MA++MI  FEKYW VI+G++A+AT+LDPR+KMRLIEFYF 
Sbjct: 419 CVIRLSLSDWLKSENEVIKEMAVKMIENFEKYWDVIHGVMAMATMLDPRYKMRLIEFYFP 478

Query: 116 QIYGSHYTAEIEHVRELCCDLMKFYTSK 143
            I+G++Y   +E +R+LC DL+K Y  K
Sbjct: 479 SIFGANYMTHLESIRKLCLDLVKEYELK 506

[Close]
BLAST of Chy1G012290 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 40/134 (29.85%), Postives = 66/134 (49.25%), Query Frame = 0 

Query: 34  YDQFTPITSDINDNEKILKSKVCEIRLKLSNWLNSDVKEIQVMALRMISKFEKYWSVIYG 93
           ++  + + S  N +      +V + +  LS  +  +   +  +A  M  K +KYW     
Sbjct: 449 FEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSL 508

Query: 94  LLAIATVLDPRFKMRLIEFYFSQIYGSHYTAEIEHVRELCCDLMKFYTSKSSIIEEPQRS 153
           +LA+A V+DPRFKM+L+EF FS+I+G      I+ V +   +L   Y +    +  PQ +
Sbjct: 509 VLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHELFTEYMA----LPSPQNT 568

Query: 154 TSTSYSTSKQDGSS 168
           TS      K DG S
Sbjct: 569 TSEG---GKADGLS 575

The following BLAST results are available for this feature:
BLAST of Chy1G012290 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P087704.2e-1036.27Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
P030104.2e-1036.27Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1[more]
Q6AVI02.1e-0932.73Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
B9FJG38.0e-0931.82Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j... [more]
Q0JMB21.2e-0734.07Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j... [more]
BLAST of Chy1G012290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DHK75.9e-3983.02Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. m... [more]
A0A0A0K4031.8e-3282.80DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=... [more]
A0A5C7IUL56.1e-2050.43BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606... [more]
A0A5C7H4081.0e-1956.52DUF4413 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024185 ... [more]
A0A5C7HKE41.8e-1949.57Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018687 PE=3 SV=1[more]
BLAST of Chy1G012290 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK23151.11.44e-4983.02zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. mak... [more]
XP_038884881.11.36e-4578.35zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida][more]
KGN44253.12.77e-4282.80hypothetical protein Csa_016011 [Cucumis sativus][more]
TXG51661.17.28e-2556.52hypothetical protein EZV62_024185 [Acer yangbiense][more]
TXG73027.12.42e-2456.82hypothetical protein EZV62_001606 [Acer yangbiense][more]
BLAST of Chy1G012290 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G42170.12.2e-0629.85BED zinc finger ;hAT family dimerisation domain [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025525hAT-like transposase, RNase-H foldPFAMPF14372DUF4413coord: 53..140
e-value: 1.2E-23
score: 83.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 45..160
NoneNo IPR availablePANTHERPTHR23272:SF141ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 2-LIKEcoord: 45..160
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 55..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G012290.1Chy1G012290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005622 intracellular anatomical structure
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0043167 ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0046983 protein dimerization activity