Chy1G011630 (gene) Cucumber (hystrix) v1

Overview
NameChy1G011630
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionmeiotic recombination protein SPO11-1
LocationchrH01: 13532534 .. 13535941 (-)
RNA-Seq ExpressionChy1G011630
SyntenyChy1G011630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTACGATGCAAAGTATCTCAAAATCCCACAACTACGATGGCTTGGAGCTTTTGCTTCAGATTTTGAGAAATACAATCTGCCAGAACAATGTCTCATCCCATTGACTTTCAAGGGTGCGGGATCTCTCATGCAGGCACACCCGCGCACACACACGCACACTGTGCATTTTTCAACTGTTATTTTCTGTATTTCTGATATGTTGAAGGTATTGTTTAACCTGTCAGACAAGAGTAGAACTGAAGCCTTGTTACAAAGATGCTACTTGCGGAGAGAGGTACAACATTGGAGGTAAAATTTACTACCATACAGCTCTAGTTTTCTTTATCATTGTTTCATGCATTGCCATTTTCTACAAAGAGTACTTCCTCCCTTAGGTTGGAATTGGAGTCAATGCTGGAAAGAGGGGTGAAATTTGAGATAGAAGCACTGTCTGTGCACAGTATTTCATTTTTGTCAGACGAGTATTTACCATCCAAAATTGAAAGTGAACTAACAACTGTTAAACTCATAGGTGATTACCAGTCCATACACTCTACCAACATGGGATTGGTTTGGAACCGTAATGGAATGAGTTAGTATAAAAAACTCATATTTGGATCAAATGTTTTTAGCCCAATTTATAATACTAAACCCAGCTTTCGACTTAACCATATTTTTCATCGGTTTCATATTTTTCACCATCCAATTTTCATTCAAGTAATTCTTCGTAATCTCGATTACATTTCAAGTTTTATGATCCCATATCATAGATCTTTCAAACTAATGATATATTAGGTGTTTGTTTAAGTCAAGTTGGTGAAACTTTGAGTAGGATAAATTCCCTGAATTTTTCAAGCAAAGCAAGATGTCAGGGGAGGTTTGAATTCATAAATTTGACAATTTTGTTGGAAGGGTGTAAGTAGAGATATGACAAAAGAGATCAAAATGATCAAAGCCAACAAAAATGATCAAATCCATCTCAATAGAAATGTTTGGCCGTTTCGGAGACTATAGTCTGTGTCCACGAGCTTCTAAAAAGTTTCAAATCTAATAGGTGTATGAAGTTTTAATTTTATGTTTAAGACGTGTCTTGACTTGAAAACATGTTTGATAAATTATTAATTATTATTTTGTGTGTAATAGGATTTGAAATATTTGAAATGTTTTTAATTTTTTTTTAAGATGAGACAATTTATTTGACATAAAATCATATTTTGTCTCTTACGTGATTTTAAAATTAACCATGTTGATAGTATCCAAGTACTATAAGCAAACTCACTAGTCACTTCCAAAACAATTAAACAACATTACTCCAATACATCACCAATTAATTACTAAGGAATCAACTCTTAATAGACCGTAGTAAATCATGAAAATTTGGAAGACTAAAAGAAAATAACACACGAATTATACGTGGAAAACTCATTCAATGTGCAGAGTGAAAACTACGATACTTGTGTGAAGTTCACCCTTGTCACATTCTCTCAATTTCGATAAATTGAAAGAACACAAATCAATCATACGAATATTTATGACCTGCCAACATTTTCATGCATTAGAGATCAACCGCTAACCGTTGAGAGGATTGAATGAAAATCACCTAGTTTTACAAATTATGTTTAATAGTTACCATAAACAAACCATAGTTCAAAACAATGATCCAATCGCTCAAAATGAGAAAATGTATTTCCAACGAGCTAACCAAAATTTAGCATGATCCAACCGTTGAGACTACAACAATTGACAATCTTGTGGAAGATATCCTTCAAATAAAGCCAACATCACACAAAGTTGCTGAATGGCAATAGTTCCACGTTATGTACTAAAACAAATTAGGCTAAATTATAAAAAAAATATGTCTTTTGAATTTTACACTTTGGGTTAAAAATGTTCATAAAGTTTCAAAATTTTAAAAAATATCCTTAAACTTTCAAAATGTGTTAAAAAAATATATTTATTAGTATTTCGTGGAAAAATCCACGAAGTTTTAAAAGTTTAAAAAATACCCTTGAATTTAACAAAAAAAAATCTTATTGTTACAAATCATTAATATCATCTTACCTCTCTCTGTTTTCCATTTTTTTTCCTTCTCTTCTTCAAACCATCCTACTCCCATATTTGTTAACTACATAGCTAAATATCACAATTTATTCTTGAAAAATCATGATAGACCAAGGCAAACTATTATTTATACATATCATGATACAAATATACATGAATAGTAATCTATCTTGGTCTATTGTGATCTATTATAGATATATTGTGATATTTTATTATATTTTATAAATATTTTGGTTTTTTTTGTTATATTTGAAAATAACCCTAATAATAACATATAACATTTGTTATTATAAAAAAAAAAAAAAGAGGCAAACGCGACTGGGTGAGTTAAAGAATGAATTTCATGAGAGGGAATTTTATTTTGCATGGGCACAATTTATAAATTTTCGTAGTCCCTTCATGAAAAATGAACACTTACTACATTTATTTTTTAAGAAACCACATCATCGTGTAATCATTTTAAACATCTAATTTTGTAAATTATAATCATGAGAACAATAGCCACAATTTATGAAATAAAAATAGTTTAAAATAAGATTTGGTGTTATACATTTAATAACTTATTAATTACAAAGCTAGAAGTTGGTTGGTGATATGTGGGACAAAGATTGCAACCACTAGATTGCACCAACTGAAAGCAAAATGAACAATAAAGAAAAACCACATATATATAAATTGAATTATGTGAGTAATAATGAAAGATTTTATTTTCCCTAACAAAGGGGGATTTCACTTCCTTCTCATCATTTAAAATTCTAAACTCTAGATTTCTCTTGTACAAAGACAACCATTATAATTATTAGAGGTGAAGCTGTGTCTATTACTTTGCTTATATGATGTTAACACCATGCAATAGGAACTTAGAGCATTCAATTAAGTCTATGACTCATTCCCCTTACAACAATCATTTTTTTTTTTGTAAAAGAAATGTTTCGATTATAATAAAGACAAATTTAATATAACATTTAACACTTTCTCTCATTTGTGGGCTTAAAATATGTGAAAGGTCCAACAAATACCATAAATAAATATTAATTAGGAAATAACAACATAGAGGGCTTGAACATAATATCTCCTCGAACCACATGCTTTGAAACTAGATTAAATCATCGATTGACATAGAAGCTTAAGTTGATGGGATGAGACAAATTTAATATAATTATTCAACATATACTAGAAAATTTCTCTTCTTTGAATAAAATTAGCTTAGCTTGACAACAATTGATGTGATCTTCTTTCTACCTCCCTAAAAGTCGAAGGCTCGATCTTTCGTCCATGAGTTATTGTACAAAAAAAAAAAAATGTACTTTTTGTAGATAAGCGTGGGTTCAATGGGCACATTTCTGCTATGGAAGTATTGTAA

mRNA sequence

ATGGCCTACGATGCAAAGTATCTCAAAATCCCACAACTACGATGGCTTGGAGCTTTTGCTTCAGATTTTGAGAAATACAATCTGCCAGAACAATGTCTCATCCCATTGACTTTCAAGGGTGCGGGATCTCTCATGCAGGCACACCCGCGCACACACACGCACACTGTGCATTTTTCAACTGTATTGTTTAACCTGTCAGACAAGAGTAGAACTGAAGCCTTGTTACAAAGATGCTACTTGCGGAGAGAGAGTACTTCCTCCCTTAGGTTGGAATTGGAGTCAATGCTGGAAAGAGGGGTGAAATTTGAGATAGAAGCACTGTCTGTGCACAGTATTTCATTTTTGTCAGACGAGTATTTACCATCCAAAATTGAAAGTGAACTAACAACTGTTAAACTCATAGATAAGCGTGGGTTCAATGGGCACATTTCTGCTATGGAAGTATTGTAA

Coding sequence (CDS)

ATGGCCTACGATGCAAAGTATCTCAAAATCCCACAACTACGATGGCTTGGAGCTTTTGCTTCAGATTTTGAGAAATACAATCTGCCAGAACAATGTCTCATCCCATTGACTTTCAAGGGTGCGGGATCTCTCATGCAGGCACACCCGCGCACACACACGCACACTGTGCATTTTTCAACTGTATTGTTTAACCTGTCAGACAAGAGTAGAACTGAAGCCTTGTTACAAAGATGCTACTTGCGGAGAGAGAGTACTTCCTCCCTTAGGTTGGAATTGGAGTCAATGCTGGAAAGAGGGGTGAAATTTGAGATAGAAGCACTGTCTGTGCACAGTATTTCATTTTTGTCAGACGAGTATTTACCATCCAAAATTGAAAGTGAACTAACAACTGTTAAACTCATAGATAAGCGTGGGTTCAATGGGCACATTTCTGCTATGGAAGTATTGTAA

Protein sequence

MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFSTVLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYLPSKIESELTTVKLIDKRGFNGHISAMEVL*
Homology
[Close]
BLAST of Chy1G011630 vs. ExPASy Swiss-Prot
Match: Q9M4A2 (Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana OX=3702 GN=SPO11-1 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-26
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           MAYD + L+ P ++WLGAF SD E Y++P+QCL+PLT +                     
Sbjct: 260 MAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEE--------------------- 319

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 DK RTEA+L RCYL+RE     RLELE+ML+RGVKFEIEALSVHS+SFLS+ Y+
Sbjct: 320 ------DKKRTEAMLLRCYLKRE-MPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYI 361

Query: 121 PSKIESELTT 131
           PSKI  E+++
Sbjct: 380 PSKIRREVSS 361

[Close]
BLAST of Chy1G011630 vs. ExPASy Swiss-Prot
Match: Q5ZPV8 (Meiotic recombination protein SPO11-1 OS=Oryza sativa subsp. indica OX=39946 GN=SPO11-1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.1e-23
Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           +AYDA +L++P +RWLG F SDFE Y LP+ CL+                      H S+
Sbjct: 280 LAYDANFLRVPDIRWLGVFTSDFEDYRLPDCCLL----------------------HLSS 339

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 D+ + E +L RCYL RE+    RLELE+ML++GVKFEIEALS  SISFLS+EY+
Sbjct: 340 -----EDRRKAEGILSRCYLHREA-PQWRLELEAMLQKGVKFEIEALSACSISFLSEEYI 376

Query: 121 PSKIE 126
           P KI+
Sbjct: 400 PKKIK 376

[Close]
BLAST of Chy1G011630 vs. ExPASy Swiss-Prot
Match: Q7Y021 (Meiotic recombination protein SPO11-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPO11-1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.1e-23
Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           +AYDA +L++P +RWLG F SDFE Y LP+ CL+                      H S+
Sbjct: 280 LAYDANFLRVPDIRWLGVFTSDFEDYRLPDCCLL----------------------HLSS 339

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 D+ + E +L RCYL RE+    RLELE+ML++GVKFEIEALS  SISFLS+EY+
Sbjct: 340 -----EDRRKAEGILSRCYLHREA-PQWRLELEAMLQKGVKFEIEALSACSISFLSEEYI 376

Query: 121 PSKIE 126
           P KI+
Sbjct: 400 PKKIK 376

[Close]
BLAST of Chy1G011630 vs. ExPASy Swiss-Prot
Match: Q9WTK8 (Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-08
Identity = 38/124 (30.65%), Postives = 63/124 (50.81%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           M+++A  L IP +RWLG   SD ++ N+P+  LIPLT                       
Sbjct: 296 MSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLT----------------------- 355

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 D+ + +++L+R Y+  +     + ELE M +  +K EI+AL++ S  +LS  YL
Sbjct: 356 ----KHDQMKLDSILKRPYITYQPL--WKKELEMMADSKMKAEIQALTLLSSDYLSRVYL 390

Query: 121 PSKI 125
           P+K+
Sbjct: 416 PNKL 390

[Close]
BLAST of Chy1G011630 vs. ExPASy Swiss-Prot
Match: Q9Y5K1 (Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-08
Identity = 37/125 (29.60%), Postives = 65/125 (52.00%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           M+++A +L +P +RWLG   SD ++ N+P+  LIPLT +                     
Sbjct: 296 MSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKR--------------------- 355

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 D+ + +++L+R Y+  +     R E+E M +  +K EI+AL+  S  +LS  YL
Sbjct: 356 ------DQMKLDSILRRPYVTCQ--PFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 391

Query: 121 PSKIE 126
           P+K++
Sbjct: 416 PNKLK 391

[Close]
BLAST of Chy1G011630 vs. ExPASy TrEMBL
Match: A0A1S3CI64 (meiotic recombination protein SPO11-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501238 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.5e-35
Identity = 89/134 (66.42%), Postives = 96/134 (71.64%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           MAYDAK L+IPQL+W+GAFASD EKY+LPEQCLIPLT K                     
Sbjct: 257 MAYDAKNLRIPQLQWIGAFASDSEKYDLPEQCLIPLTSK--------------------- 316

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 DK RTEALLQRCYLRRE     RLEL+SML+RGVKFEIEALSVH+ISFLSD YL
Sbjct: 317 ------DKRRTEALLQRCYLRRE-VPHWRLELDSMLQRGVKFEIEALSVHNISFLSDHYL 362

Query: 121 PSKIESELTTVKLI 135
           PSKIESELTT KLI
Sbjct: 377 PSKIESELTTGKLI 362

[Close]
BLAST of Chy1G011630 vs. ExPASy TrEMBL
Match: A0A1S4E3Z9 (meiotic recombination protein SPO11-1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501238 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.5e-35
Identity = 89/134 (66.42%), Postives = 96/134 (71.64%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           MAYDAK L+IPQL+W+GAFASD EKY+LPEQCLIPLT K                     
Sbjct: 226 MAYDAKNLRIPQLQWIGAFASDSEKYDLPEQCLIPLTSK--------------------- 285

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 DK RTEALLQRCYLRRE     RLEL+SML+RGVKFEIEALSVH+ISFLSD YL
Sbjct: 286 ------DKRRTEALLQRCYLRRE-VPHWRLELDSMLQRGVKFEIEALSVHNISFLSDHYL 331

Query: 121 PSKIESELTTVKLI 135
           PSKIESELTT KLI
Sbjct: 346 PSKIESELTTGKLI 331

[Close]
BLAST of Chy1G011630 vs. ExPASy TrEMBL
Match: A0A1S3CJR6 (meiotic recombination protein SPO11-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501238 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.5e-35
Identity = 89/134 (66.42%), Postives = 96/134 (71.64%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           MAYDAK L+IPQL+W+GAFASD EKY+LPEQCLIPLT K                     
Sbjct: 260 MAYDAKNLRIPQLQWIGAFASDSEKYDLPEQCLIPLTSK--------------------- 319

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 DK RTEALLQRCYLRRE     RLEL+SML+RGVKFEIEALSVH+ISFLSD YL
Sbjct: 320 ------DKRRTEALLQRCYLRRE-VPHWRLELDSMLQRGVKFEIEALSVHNISFLSDHYL 365

Query: 121 PSKIESELTTVKLI 135
           PSKIESELTT KLI
Sbjct: 380 PSKIESELTTGKLI 365

[Close]
BLAST of Chy1G011630 vs. ExPASy TrEMBL
Match: A0A1S4E415 (meiotic recombination protein SPO11-1 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103501238 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.5e-35
Identity = 89/134 (66.42%), Postives = 96/134 (71.64%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           MAYDAK L+IPQL+W+GAFASD EKY+LPEQCLIPLT K                     
Sbjct: 223 MAYDAKNLRIPQLQWIGAFASDSEKYDLPEQCLIPLTSK--------------------- 282

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 DK RTEALLQRCYLRRE     RLEL+SML+RGVKFEIEALSVH+ISFLSD YL
Sbjct: 283 ------DKRRTEALLQRCYLRRE-VPHWRLELDSMLQRGVKFEIEALSVHNISFLSDHYL 328

Query: 121 PSKIESELTTVKLI 135
           PSKIESELTT KLI
Sbjct: 343 PSKIESELTTGKLI 328

[Close]
BLAST of Chy1G011630 vs. ExPASy TrEMBL
Match: A0A6J1IGM0 (meiotic recombination protein SPO11-1 OS=Cucurbita maxima OX=3661 GN=LOC111476764 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-33
Identity = 86/132 (65.15%), Postives = 92/132 (69.70%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           MAYDAKYL+IPQL WLGAFASD + YNLP+QCLIPLT                       
Sbjct: 260 MAYDAKYLRIPQLHWLGAFASDSDTYNLPQQCLIPLT----------------------- 319

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
               L DK RTEALL RCYLRRE     RLELESML+RGVKFEIEALSVH+ISFLS+EYL
Sbjct: 320 ----LEDKRRTEALLLRCYLRRE-VPHWRLELESMLQRGVKFEIEALSVHNISFLSEEYL 363

Query: 121 PSKIESELTTVK 133
           PSKIESELT  K
Sbjct: 380 PSKIESELTKGK 363

[Close]
BLAST of Chy1G011630 vs. NCBI nr
Match: XP_031744448.1 (meiotic recombination protein SPO11-1-like isoform X8 [Cucumis sativus] >XP_031744456.1 meiotic recombination protein SPO11-1-like isoform X8 [Cucumis sativus] >XP_031745632.1 meiotic recombination protein SPO11-1 isoform X8 [Cucumis sativus])

HSP 1 Score: 215 bits (547), Expect = 2.47e-67
Identity = 116/141 (82.27%), Postives = 119/141 (84.40%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH---PRTHTHTVH 60
           MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH    RTHTHT  
Sbjct: 121 MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHRAHTRTHTHTAF 180

Query: 61  FST---------VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALS 120
            +          V+FNLSDKSRTEALLQRCYLRRE     RLELESMLERGVKFEIEALS
Sbjct: 181 SNVIFCISDMLKVMFNLSDKSRTEALLQRCYLRRE-VQHWRLELESMLERGVKFEIEALS 240

Query: 121 VHSISFLSDEYLPSKIESELT 129
           VH+ISFLSDEYLPSKIESELT
Sbjct: 241 VHNISFLSDEYLPSKIESELT 260

[Close]
BLAST of Chy1G011630 vs. NCBI nr
Match: XP_031744442.1 (meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus] >XP_031744450.1 meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus] >XP_031745626.1 meiotic recombination protein SPO11-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 215 bits (547), Expect = 1.23e-65
Identity = 116/141 (82.27%), Postives = 119/141 (84.40%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH---PRTHTHTVH 60
           MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH    RTHTHT  
Sbjct: 257 MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHRAHTRTHTHTAF 316

Query: 61  FST---------VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALS 120
            +          V+FNLSDKSRTEALLQRCYLRRE     RLELESMLERGVKFEIEALS
Sbjct: 317 SNVIFCISDMLKVMFNLSDKSRTEALLQRCYLRRE-VQHWRLELESMLERGVKFEIEALS 376

Query: 121 VHSISFLSDEYLPSKIESELT 129
           VH+ISFLSDEYLPSKIESELT
Sbjct: 377 VHNISFLSDEYLPSKIESELT 396

[Close]
BLAST of Chy1G011630 vs. NCBI nr
Match: XP_031744438.1 (meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus] >XP_031744439.1 meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus] >XP_031744440.1 meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus] >XP_031744441.1 meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus] >XP_031744449.1 meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus] >XP_031745625.1 meiotic recombination protein SPO11-1 isoform X1 [Cucumis sativus] >XP_031745986.1 meiotic recombination protein SPO11-1-like isoform X4 [Cucumis sativus])

HSP 1 Score: 215 bits (547), Expect = 1.33e-65
Identity = 116/141 (82.27%), Postives = 119/141 (84.40%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH---PRTHTHTVH 60
           MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH    RTHTHT  
Sbjct: 260 MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHRAHTRTHTHTAF 319

Query: 61  FST---------VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALS 120
            +          V+FNLSDKSRTEALLQRCYLRRE     RLELESMLERGVKFEIEALS
Sbjct: 320 SNVIFCISDMLKVMFNLSDKSRTEALLQRCYLRRE-VQHWRLELESMLERGVKFEIEALS 379

Query: 121 VHSISFLSDEYLPSKIESELT 129
           VH+ISFLSDEYLPSKIESELT
Sbjct: 380 VHNISFLSDEYLPSKIESELT 399

[Close]
BLAST of Chy1G011630 vs. NCBI nr
Match: XP_031744432.1 (meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 215 bits (547), Expect = 1.64e-65
Identity = 116/141 (82.27%), Postives = 119/141 (84.40%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH---PRTHTHTVH 60
           MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH    RTHTHT  
Sbjct: 268 MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHRAHTRTHTHTAF 327

Query: 61  FST---------VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALS 120
            +          V+FNLSDKSRTEALLQRCYLRRE     RLELESMLERGVKFEIEALS
Sbjct: 328 SNVIFCISDMLKVMFNLSDKSRTEALLQRCYLRRE-VQHWRLELESMLERGVKFEIEALS 387

Query: 121 VHSISFLSDEYLPSKIESELT 129
           VH+ISFLSDEYLPSKIESELT
Sbjct: 388 VHNISFLSDEYLPSKIESELT 407

[Close]
BLAST of Chy1G011630 vs. NCBI nr
Match: XP_031744431.1 (meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 215 bits (547), Expect = 1.77e-65
Identity = 116/141 (82.27%), Postives = 119/141 (84.40%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH---PRTHTHTVH 60
           MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAH    RTHTHT  
Sbjct: 271 MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHRAHTRTHTHTAF 330

Query: 61  FST---------VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALS 120
            +          V+FNLSDKSRTEALLQRCYLRRE     RLELESMLERGVKFEIEALS
Sbjct: 331 SNVIFCISDMLKVMFNLSDKSRTEALLQRCYLRRE-VQHWRLELESMLERGVKFEIEALS 390

Query: 121 VHSISFLSDEYLPSKIESELT 129
           VH+ISFLSDEYLPSKIESELT
Sbjct: 391 VHNISFLSDEYLPSKIESELT 410

[Close]
BLAST of Chy1G011630 vs. TAIR 10
Match: AT3G13170.1 (Spo11/DNA topoisomerase VI, subunit A protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           MAYD + L+ P ++WLGAF SD E Y++P+QCL+PLT +                     
Sbjct: 260 MAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEE--------------------- 319

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 DK RTEA+L RCYL+RE     RLELE+ML+RGVKFEIEALSVHS+SFLS+ Y+
Sbjct: 320 ------DKKRTEAMLLRCYLKRE-MPQWRLELETMLKRGVKFEIEALSVHSLSFLSEVYI 361

Query: 121 PSKIESELTT 131
           PSKI  E+++
Sbjct: 380 PSKIRREVSS 361

[Close]
BLAST of Chy1G011630 vs. TAIR 10
Match: AT5G02820.1 (Spo11/DNA topoisomerase VI, subunit A protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.8e-08
Identity = 35/127 (27.56%), Postives = 59/127 (46.46%), Query Frame = 0 

Query: 1   MAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKGAGSLMQAHPRTHTHTVHFST 60
           M+YD+  L  P ++WLG   SD +KY +PEQC +P+T +                     
Sbjct: 327 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQ--------------------- 386

Query: 61  VLFNLSDKSRTEALLQRCYLRRESTSSLRLELESMLERGVKFEIEALSVHSISFLSDEYL 120
                 D    + +L+  ++++        EL  M++   K EI+ALS     +LS+ YL
Sbjct: 387 ------DIKTGKDMLEEDFVKK--NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 424

Query: 121 PSKIESE 128
           P K++ +
Sbjct: 447 PLKLQQQ 424

The following BLAST results are available for this feature:
BLAST of Chy1G011630 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M4A22.0e-2650.77Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana OX=3702 GN=SPO11-1... [more]
Q5ZPV88.1e-2347.20Meiotic recombination protein SPO11-1 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
Q7Y0218.1e-2347.20Meiotic recombination protein SPO11-1 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q9WTK84.3e-0830.65Meiotic recombination protein SPO11 OS=Mus musculus OX=10090 GN=Spo11 PE=1 SV=2[more]
Q9Y5K15.6e-0829.60Meiotic recombination protein SPO11 OS=Homo sapiens OX=9606 GN=SPO11 PE=1 SV=1[more]
BLAST of Chy1G011630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CI649.5e-3566.42meiotic recombination protein SPO11-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A1S4E3Z99.5e-3566.42meiotic recombination protein SPO11-1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A1S3CJR69.5e-3566.42meiotic recombination protein SPO11-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A1S4E4159.5e-3566.42meiotic recombination protein SPO11-1 isoform X4 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1IGM03.1e-3365.15meiotic recombination protein SPO11-1 OS=Cucurbita maxima OX=3661 GN=LOC11147676... [more]
BLAST of Chy1G011630 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031744448.12.47e-6782.27meiotic recombination protein SPO11-1-like isoform X8 [Cucumis sativus] >XP_0317... [more]
XP_031744442.11.23e-6582.27meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus] >XP_0317... [more]
XP_031744438.11.33e-6582.27meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus] >XP_0317... [more]
XP_031744432.11.64e-6582.27meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus][more]
XP_031744431.11.77e-6582.27meiotic recombination protein SPO11-1-like isoform X1 [Cucumis sativus][more]
BLAST of Chy1G011630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13170.11.5e-2750.77Spo11/DNA topoisomerase VI, subunit A protein [more]
AT5G02820.19.8e-0827.56Spo11/DNA topoisomerase VI, subunit A protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1360.10coord: 1..129
e-value: 1.2E-21
score: 79.3
NoneNo IPR availablePANTHERPTHR10848:SF3MEIOTIC RECOMBINATION PROTEIN SPO11-1coord: 1..39
NoneNo IPR availablePANTHERPTHR10848:SF3MEIOTIC RECOMBINATION PROTEIN SPO11-1coord: 66..126
IPR002815Spo11/DNA topoisomerase VI subunit APANTHERPTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11coord: 1..39
IPR002815Spo11/DNA topoisomerase VI subunit APANTHERPTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11coord: 66..126
IPR036078Spo11/DNA topoisomerase VI subunit A superfamilySUPERFAMILY56726DNA topoisomerase IV, alpha subunitcoord: 2..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G011630.1Chy1G011630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007129 homologous chromosome pairing at meiosis
biological_process GO:0042138 meiotic DNA double-strand break formation
biological_process GO:0032259 methylation
biological_process GO:0007131 reciprocal meiotic recombination
cellular_component GO:0005694 chromosome
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003677 DNA binding
molecular_function GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
molecular_function GO:0043167 ion binding
molecular_function GO:0004809 tRNA (guanine-N2-)-methyltransferase activity