Chy1G009490 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTACTTTCTTTCAAGTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCTCAGACTCTGCGAGACTTCCGACACCGTATTGGGAGCAGATGTTGCCTAAGAAGTTGCCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAATGGGAATCTGCCAGCAAAGGACGGTAACGTTTAGGTTTCCGGTGGTACGAGGAAGTTGATACTTTTTGCTTGTTGAGCAAATTATTCAGTCAGACCGTCGTAATGCAGGTCGCTTCCTTATGTTTAAAATGTAGTTTTTAATTTCTCTCCTGCGTCGGTCTGTTCCAGGCCTGACGAATAATTTCTCACCCGGAACGAAGGGAAAATTGAGGGACTGAAGGATGAGCGGGGCAACGTGGTGGTTTACGATCGTGCCGGAGCTGCCACAGTTCAGTGGCATGAGCTCTGA ATGTTACTTTCTTTCAAGTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCTCAGACTCTGCGAGACTTCCGACACCGTATTGGGAGCAGATGTTGCCTAAGAAGTTGCCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAATGGGAATCTGCCAGCAAAGGACGGGAAAATTGAGGGACTGAAGGATGAGCGGGGCAACGTGGTGGTTTACGATCGTGCCGGAGCTGCCACAGTTCAGTGGCATGAGCTCTGA ATGTTACTTTCTTTCAAGTTTAGATTCATTCTCTTCTTAACACTTGTTCTCGCTCTCACCTCCATTTCCTCAGACTCTGCGAGACTTCCGACACCGTATTGGGAGCAGATGTTGCCTAAGAAGTTGCCCTCTCCATCGTCTGCGCCGTCCAAAGGGACAAACACCGTCGCTCCGTCTTCTTCTAAACCTATGAAAGTTAATGGGAATCTGCCAGCAAAGGACGGGAAAATTGAGGGACTGAAGGATGAGCGGGGCAACGTGGTGGTTTACGATCGTGCCGGAGCTGCCACAGTTCAGTGGCATGAGCTCTGA MLLSFKFRFILFLTLVLALTSISSDSARLPTPYWEQMLPKKLPSPSSAPSKGTNTVAPSSSKPMKVNGNLPAKDGKIEGLKDERGNVVVYDRAGAATVQWHEL* Homology
BLAST of Chy1G009490 vs. ExPASy TrEMBL
Match: A0A5D3DI56 (Glutamate-gated kainate-type ion channel receptor subunit GluR5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003180 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 7.1e-29 Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Chy1G009490 vs. ExPASy TrEMBL
Match: A0A7N2MJW9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.1e-11 Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Chy1G009490 vs. ExPASy TrEMBL
Match: W9S9P5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012616 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.1e-10 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of Chy1G009490 vs. ExPASy TrEMBL
Match: A0A803PR73 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.5e-10 Identity = 41/77 (53.25%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Chy1G009490 vs. ExPASy TrEMBL
Match: A0A0S3RNK5 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G214100 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 5.6e-10 Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of Chy1G009490 vs. NCBI nr
Match: KAE8646070.1 (hypothetical protein Csa_015561 [Cucumis sativus]) HSP 1 Score: 137 bits (344), Expect = 8.76e-40 Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Chy1G009490 vs. NCBI nr
Match: TYK23265.1 (glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]) HSP 1 Score: 136 bits (343), Expect = 1.25e-39 Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Chy1G009490 vs. NCBI nr
Match: KAG6607702.1 (hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (256), Expect = 8.28e-26 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of Chy1G009490 vs. NCBI nr
Match: BAT82172.1 (hypothetical protein VIGAN_03214100 [Vigna angularis var. angularis]) HSP 1 Score: 75.9 bits (185), Expect = 1.26e-15 Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of Chy1G009490 vs. NCBI nr
Match: KAF9855135.1 (hypothetical protein H0E87_006638 [Populus deltoides]) HSP 1 Score: 75.9 bits (185), Expect = 1.32e-15 Identity = 42/77 (54.55%), Postives = 59/77 (76.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|