Chy1G008510 (gene) Cucumber (hystrix) v1

Overview
NameChy1G008510
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH01: 7460744 .. 7461255 (-)
RNA-Seq ExpressionChy1G008510
SyntenyChy1G008510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCTTCAGCGCTGTACGTTGCCAACAAGAATTTGGGGCCGAGATTCTGGCACTTTCCTTAACTTCCTAAGGCTTGTGCATTTAGGTGCTCCTAAATTTTGAATATATCGCAATTTTGATATTCCTAAATTACGATCTTTTTAGGTTCATGCTTCATTTAAGCGGACTACGAACTTTTTTATTTTCTACAATCATTTTCTTGAACGGATCGGCGTTCGGAATATATGATTTTTCGATTGTTCTTCCTTTTATTTCTAGTGATTTATTAGTTCACTCTCAACCCAGGTAGAGACCACCAGCCTTGTTTTGATGGTTGAATTTTTGTTAATACATGGATTTTTAGTTATATTCCAGTGTTAAAACAAGTTAATACGTCGGTAGAGGATTAATCGATCACTTGGCCTTTATAATTTGATGTAAATAAAATCAAGTTCATTATCAATTACAATTGTTTTTTCATGACAGAAACACCGACTGGCAGAATTTGGAGGACACTTTTCCAACTACGTACA

mRNA sequence

CGTCTTCAGCGCTGTACGTTGCCAACAAGAATTTGGGGCCGAGATTCTGGCACTTTCCTTAACTTCCTAAGGCTTGTGCATTTAGGGATCGGCGTTCGGAATATATGATTTTTCGATTGTTCTTCCTTTTATTTCTAGTGATTTATTAGTTCACTCTCAACCCAGAAACACCGACTGGCAGAATTTGGAGGACACTTTTCCAACTACGTACA

Coding sequence (CDS)

CGTCTTCAGCGCTGTACGTTGCCAACAAGAATTTGGGGCCGAGATTCTGGCACTTTCCTTAACTTCCTAAGGCTTGTGCATTTAGGGATCGGCGTTCGGAATATATGATTTTTCGATTGTTCTTCCTTTTATTTCTAGTGATTTATTAGTTCACTCTCAACCCAGAAACACCGACTGGCAGAATTTGGAGGACACTTTTCCAACTACGTACA

Protein sequence

RLQRCTLPTRIWGRDSGTFLNFLRLVHLGIGVRNI*FFDCSSFYF**FISSLSTQKHRLAEFGGHFSNYVX
Homology
[Close]
BLAST of Chy1G008510 vs. ExPASy TrEMBL
Match: A0A0A0K918 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239580 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06
Identity = 26/27 (96.30%), Postives = 26/27 (96.30%), Query Frame = 0 

Query: 1  RLQRCTLPTRIWGRDSGTFLNFLRLVH 28
          RLQRCTLPTRIWGRDSGTFLN LRLVH
Sbjct: 33 RLQRCTLPTRIWGRDSGTFLNLLRLVH 59

[Close]
BLAST of Chy1G008510 vs. NCBI nr
Match: KAE8646112.1 (hypothetical protein Csa_015950, partial [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 2.56e-10
Identity = 26/27 (96.30%), Postives = 26/27 (96.30%), Query Frame = 0 

Query: 1  RLQRCTLPTRIWGRDSGTFLNFLRLVH 27
          RLQRCTLPTRIWGRDSGTFLN LRLVH
Sbjct: 1  RLQRCTLPTRIWGRDSGTFLNLLRLVH 27

The following BLAST results are available for this feature:
BLAST of Chy1G008510 vs.
Match NameE-valueIdentityDescription
BLAST of Chy1G008510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9182.6e-0696.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239580 PE=4 SV=1[more]
BLAST of Chy1G008510 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646112.12.56e-1096.30hypothetical protein Csa_015950, partial [Cucumis sativus][more]
BLAST of Chy1G008510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G008510.1Chy1G008510.1mRNA