Chy1G007970 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G007970
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH01: 6408883 .. 6409073 (-)
RNA-Seq Expression	Chy1G007970
Synteny	Chy1G007970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACACGGCACCAAGATCTCTGCAAGCACCGCCAAGCGCAACCCCACAAAATTGGCTCAAGTAAGGGTGTTGGTGCGATAGCAGAGGCAAAAAAAGTGGCAGGACTTTTGGGGAGGTTGACGAACAACAAGCAGATGAAGGGGAGAAGCAGGGCAGTCCAACCTGTGTGGAGGTGTTTGAAGCCGCCATGA

mRNA sequence

TAACACGGCACCAAGATCTCTGCAAGCACCGCCAAGCGCAACCCCACAAAATTGGCTCAAGTAAGGGTGTTGGTGCGATAGCAGAGGCAAAAAAAGTGGCAGGACTTTTGGGGAGGTTGACGAACAACAAGCAGATGAAGGGGAGAAGCAGGGCAGTCCAACCTGTGTGGAGGTGTTTGAAGCCGCCATGA

Coding sequence (CDS)

TAACACGGCACCAAGATCTCTGCAAGCACCGCCAAGCGCAACCCCACAAAATTGGCTCAAGTAAGGGTGTTGGTGCGATAGCAGAGGCAAAAAAAGTGGCAGGACTTTTGGGGAGGTTGACGAACAACAAGCAGATGAAGGGGAGAAGCAGGGCAGTCCAACCTGTGTGGAGGTGTTTGAAGCCGCCATGA

Protein sequence

*HGTKISASTAKRNPTKLAQVRVLVR*QRQKKWQDFWGG*RTTSR*RGEAGQSNLCGGV*SRHX

Homology

The following BLAST results are available for this feature:

BLAST of Chy1G007970 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G007970 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G007970 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G007970 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G007970.1	Chy1G007970.1	mRNA