Chy1G005550 (gene) Cucumber (hystrix) v1

Overview
NameChy1G005550
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationchrH01: 3983000 .. 3986785 (-)
RNA-Seq ExpressionChy1G005550
SyntenyChy1G005550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCCACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCACTCTCCCCTGCGCAATCTCGTCGTTTTGCCTCCAATTCTATGGATGACGATCGTGCCTTCTCGGAGTCCGAGTCGATAAACACCCCGCCGCAACGTCGTTCTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGAATCACTAATGAAAGGTCGACTTCGCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAGACTGAGGAGAACGCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAGTCGCAACCGCAGCGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGCACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAATTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGTATTCCTCCAAATGCCTTCAGTTTTGGTGTCTTGATTCAGGGATTGTGCAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGCGTTATGCAATGAGAGGGGTGTGGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATGTGGAAAGTGTTCCTTGGTAATAAAAAACCCCCATTTTTCTGAGATTGCTGTCGTAGTGTTGTAAGTCTTCTCTCTTTTCCCTTTTATGTAATTTCTTAGATAATTCAAGTTATGTTTACTATAGATTATATGGAGTAATTTGAGTAGTTAACCGATATGTTTGCAACACAAATTGCCTTCAATCTTTTGATAGCTTCTATAAGTTTTCACGAATGGGTACAAATATTATAAGATACGAAACAAGGAAAAGGAGAATAGCCCGTATGTTACCTTGGTATTTACAATCTTTACAATTTATCATATACTATTTAGTTTCATCAATATATATATATTTTTTAATATTTTCATTAGCATTCTGGGATGGTTGTGAATTATAAAAGAGGAAAAACAACCTTTCATTAGAAAAAAAAATGAAGAAATACACGGAAATCCAAAAAAACCATGCACACAAAAAGGAGTGCCACTAGAGAAACGGTGTCTAGTTGTAAAATGGTCCCTAACGAATAATTACACACAACCTACTTATGCTTGTGTATTTTTTTGAATGAGAAACACAACTTTCATTGAGAAAGAATGAAAGAATGCATGGGTACAAAAAAACCAAACCCACAAAACGAAGGAATCTCATTATGAGAAGGGACACCAACTGTACAAAATTATGTTCATAGAATAATTACAAAAGATCTTTGATATTGAAGGCAAGCGAACAAGAGAACATAAGCCTTCGCTTCCCATCTGAACACCCTACTATTTCTCTTGTCCCCAAGCACCACAGAATAGCACAAACGCTGGCACATCAGAGAAACCGGCCTTTCTTCCCAAACGGAGGAACTCCTTGATCATATCTTTATCAACTCTGGGACAAACACTGCTCAAGCCAAAAGTCTGGAAGAAAGAGTCCCAAACACTCGTTCTCATTGTTATCTTCATTCAGGAATATCGTTACCTAAGCTTATTTTGATTTCTTCCCATCAAGCTTACTGCACAAGTTTACAAGTTTTAGAATCACTCAACAAAAAGCTAGCCCAACCTATAACCTGTCATACGATAAGTGCACACTTTAAGTTAAGTTAAAAGCTTCCGAAATCTTACTTAGCATAAACGTACAAGAACATACAAGAAGTCACATAAGCATAAACATACAAGAACTTAGGTGTAAATCTTACTTAACGTTGCTGCTTTCCCCCTCCCTCTCTTTCTGCTCCTTCCTCATCTTCTTCTTATCAACACCAGCTGGAAGTGCAAAAGTTTACATATGGATAAATACCATTTTGGGCTTAACCAGTTGAAAAGATTCAATTTGCCTTTCAAAAATGATACACAAAATTTCACAAACTAAGCATTATGTGTGCATTTCTCACTACATCATTAATTACATTTCAATCCAGACAATGTTTTATATTGAACTCATGGGACCACCCGCCTTAAAGAAACTCGTAAGAAATTAATTCCTGGATAGATGATCACCATGGTTTGAACTCATGGCCTCTTAGTTAGATATTGAGACTCTTTTTTATCACTAGACCAATTAATTCCTTGAGGTTTTTCCTCTTGAAGAGGCGAGGCTTAAGCATCAAATAATGAATTAAAAATGTTTTATAAAACCTAAAGTCGCTAAACATGATAGGCGTATAAAAGTCTGAAAAAAGAAACTTCCCCACAATTTTCACTTAATAAAAAATTCTAAACGGACATCTTTATCATCATTACTGCAACTATTATCAGTAATAGGATTGATTTATGTTATATTTGTTTGCTTTCAACATTCTTAAGTTCGCAATAGTAGAAATAATTCTAGTTGTAATTGTCACAACTCAAACCTTAATATTTTTTAAGAATTAGGCAAATCACTGTTATTTTTCTAATCACTAGGTGAGGACCGTGAGGTATAGAGATTTTAAGCCTTGATGCGTTTTCACAGAAGGCACAAGCCTCATTTGTGGGAGGTGTAAGCCTCTTAATGTTCAATAAAGGCATAAGTCTCGAGGCTAAAACCTAGAGCCTTGCCTCGAGGCGGGCCTCAAGGCGTAAGCCTCAATAACTTTTTAAAACATGGAATCCAAAATAATAACCGATTGTGAAGATTTTGACTTGGATGCTCAACAAGGAATCGCAACTCAATTTTTAGGCTTCCTAAATATTTGCAGGCAAAGTTGCATCTTATGGGAGAATCGACTCACTAGTGAATGGAACTCAACTAGAGACTTTTAGGTCATTACAATTTGGAATTTGACGAGTGGAAGTTCATACTCAATATTGTGTGCAGATTTTTTGGCTATTATTAGAAAAATACTTAAATGCATCCCAAATTTGCCACATGACAGATTCCTCTTATATCTTTCTTAAAATATTTTAATTCTTTTTTGTGTGTGTAATGTGAGTGGGGTGCATGGAGATAGAATGCATCTAAGCATGCTTTCTTAATTATTATTAAGATGATGTGGGGATGCCCAATTGCGCCACCTGATCCTTAGATTCTAGTTTTTTTTTTTGCTTTTGTACAATCCTCTTGCTCTTAGAGCTCTTGTATCTCTTTTTTGTACTATTATTAATTAAGAGATCTGTTTCCTTAATATGATATTAAGATGATGTTTTCATTTAATAAGGTGGTATAATTTGCATTCTTGTTAGTTATGGCTAAGCAGCTCCTTAAGTGTTGATGCTTATCTGTTTGATTATGTAGGTGAAGAGACCAATCATATTACTGAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAG

mRNA sequence

ATGGGGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCCACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCACTCTCCCCTGCGCAATCTCGTCGTTTTGCCTCCAATTCTATGGATGACGATCGTGCCTTCTCGGAGTCCGAGTCGATAAACACCCCGCCGCAACGTCGTTCTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGAATCACTAATGAAAGGTCGACTTCGCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAGACTGAGGAGAACGCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAGTCGCAACCGCAGCGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGCACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAATTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGTATTCCTCCAAATGCCTTCAGTTTTGGTGTCTTGATTCAGGGATTGTGCAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGCGTTATGCAATGAGAGGGGTGTGGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATGTGGAAAGTGTTCCTTGGTGAAGAGACCAATCATATTACTGAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAG

Coding sequence (CDS)

ATGGGGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCCACTATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCACTCTCCCCTGCGCAATCTCGTCGTTTTGCCTCCAATTCTATGGATGACGATCGTGCCTTCTCGGAGTCCGAGTCGATAAACACCCCGCCGCAACGTCGTTCTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGCTTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGAATCACTAATGAAAGGTCGACTTCGCCACAAAGGAGTGAGTCTTTATCTCAGAAAGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAAAGAGAAGACTGAGGAGAACGCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAGTCGCAACCGCAGCGTCCTCCAGAAGCTGATGAGATATTCAGGAAAATGAAGGAGACTGGTTTAATTCCCAATGCTGTTGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGGTTTGATTCGTGAGAAAGGCACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAATTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGTATTCCTCCAAATGCCTTCAGTTTTGGTGTCTTGATTCAGGGATTGTGCAAATGCAAAAAGTTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGCGTTATGCAATGAGAGGGGTGTGGATGAAGCTCATAGTGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATGTGGAAAGTGTTCCTTGGTGAAGAGACCAATCATATTACTGAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAG

Protein sequence

MGAFQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDRAFSESESINTPPQRRSPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRITNERSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGEETNHITEKKPQVEIIVTQ*
Homology
BLAST of Chy1G005550 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.6e-70
Identity = 149/271 (54.98%), Postives = 181/271 (66.79%), Query Frame = 0

Query: 95  NRNQRFNRHSEGSSSRITNERSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENA 154
           NR  R  R S  +S R    R          +  D  FLE+FKL  +  S    K E+  
Sbjct: 51  NRPLRGERSS--NSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQ-- 110

Query: 155 SSAPVSESMQEKQQSQPQRPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLF 214
                          +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLF
Sbjct: 111 ------------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLF 170

Query: 215 GLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKC 274
           GL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQNNGI PNAFS+GVL+QGL  C
Sbjct: 171 GLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNC 230

Query: 275 KKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKAL 334
             LDDAVAFC+EMLESGH PN+ TFV L+DALC  +GV++A S ++T  QKGF ++ KA+
Sbjct: 231 NMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAV 290

Query: 335 REFLNKRAPFSPDMWKVFLGEETNHITEKKP 365
           +EF++KRAPF    W+         I +KKP
Sbjct: 291 KEFMDKRAPFPSLAWEA--------IFKKKP 297

BLAST of Chy1G005550 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-23
Identity = 53/146 (36.30%), Postives = 85/146 (58.22%), Query Frame = 0

Query: 176 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 236 DGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHL 295
            GFC+     EA ++F +M   G+ P++ +F  LI G CK   + DA    N M+++G  
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 296 PNLTTFVGLIDALCNERGVDEAHSVV 319
           PN+ T+  LID LC E  +D A+ ++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELL 479

BLAST of Chy1G005550 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.1e-23
Identity = 46/151 (30.46%), Postives = 93/151 (61.59%), Query Frame = 0

Query: 176 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392

Query: 236 DGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHL 295
           + +CKA++ D+ +R+FR++ + G+ PN  ++  L+ G C+  KL+ A     EM+  G  
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452

Query: 296 PNLTTFVGLIDALCNERGVDEAHSVVETFKQ 324
           P++ T+  L+D LC+   +++A  + E  ++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQK 483

BLAST of Chy1G005550 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 54/157 (34.39%), Postives = 91/157 (57.96%), Query Frame = 0

Query: 176 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA  + R+M + G  P+ V   A+++G C  G +++A+ +   ++EKG  P+VV Y+ V+
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 236 DGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHL 295
            GFC++   DEA+R+ R+M   GI P+  ++  LIQG C+ ++  +A     EML  G  
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 296 PNLTTFVGLIDALCNERGVDEAHSVVETFKQKGFLID 330
           P+  T+  LI+A C E  +++A  +     +KG L D
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

BLAST of Chy1G005550 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 179 EIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGF 238
           +IF +M + G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT++++G 
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237

Query: 239 CKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNL 298
           C ++  DEA+R   +M++ GI PN F++  L+ GLCK  +   A+     M+  G  PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297

Query: 299 TTFVGLIDALCNERGVDEAHSVVETFKQKGFLID 330
            T+  LI  LC E+ + EA  +++    +G   D
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331

BLAST of Chy1G005550 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 7.3e-185
Identity = 335/353 (94.90%), Postives = 341/353 (96.60%), Query Frame = 0

Query: 1   MGAFQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDRAF 60
           MGAFQ QSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSL PAQSRRFASNSMDDD AF
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 61  SESESINTPPQRRSPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRITNERSTSPQ 120
           S+SE INTPPQRR PPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSR TNE STSPQ
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEEN+SSAPVSESM EKQQS+PQRPPEADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQ+NGIPPNAFSFGVLIQGL KCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLG 354
           LIDALCNE+GVDEAHSVVETFKQKGFLIDEKALRE LNKRAPFSPD+WKVF G
Sbjct: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFG 353

BLAST of Chy1G005550 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.7e-179
Identity = 327/355 (92.11%), Postives = 336/355 (94.65%), Query Frame = 0

Query: 1   MGAFQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDRAF 60
           M AFQFQSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSLSPA SRRF+SNSMDDDRAF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SESESINTPPQRRSPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRITNERSTSPQ 120
           SESE  NTPPQRR PPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSR TNE STS Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSG EKTEEN+SSAPVSESMQEKQQSQ QRPP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQN GI PNAFSFGVLIQGL KCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGEE 356
           LID LC+E+GVDEAH+VVETFKQKGFLIDEKALREFLNKRAPFSPD+WKVF G +
Sbjct: 301 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNK 355

BLAST of Chy1G005550 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.7e-179
Identity = 327/355 (92.11%), Postives = 336/355 (94.65%), Query Frame = 0

Query: 1   MGAFQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDRAF 60
           M AFQFQSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSLSPA SRRF+SNSMDDDRAF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SESESINTPPQRRSPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRITNERSTSPQ 120
           SESE  NTPPQRR PPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSR TNE STS Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSG EKTEEN+SSAPVSESMQEKQQSQ QRPP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQN GI PNAFSFGVLIQGL KCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGEE 356
           LID LC+E+GVDEAH+VVETFKQKGFLIDEKALREFLNKRAPFSPD+WKVF G +
Sbjct: 301 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNK 355

BLAST of Chy1G005550 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 2.3e-146
Identity = 285/362 (78.73%), Postives = 309/362 (85.36%), Query Frame = 0

Query: 1   MGA--FQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDR 60
           MGA   Q QSRL+VSKIL STIR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSESESINTPPQRRSPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRITNE 120
            FS SE  ++PPQRRSPPD REARRVP+  G V+A Y  DNRNQRFNRH EGS SR  NE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 RSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRP 180
              S +RSESLSQKDFSFLEKFKLNTDN S+  EKTE  +SSA  SESMQ K QSQPQ P
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESMQGK-QSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAE  DEAIRIFRKMQNNGI PNAFS+GVLIQGL KCKKL+DAV+FC EMLESGH PN
Sbjct: 241 FCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGE 357
           LTTFVGLID LC E+GVDEAH+V+ET KQKGFLI+EKALREFLNKRAPFSP +W++  G+
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGK 360

BLAST of Chy1G005550 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 8.7e-146
Identity = 282/362 (77.90%), Postives = 311/362 (85.91%), Query Frame = 0

Query: 1   MGA--FQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDR 60
           MGA   Q QSRL+VSKILSSTIR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSESESINTPPQRRSPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRITNE 120
            FS SE  ++PPQRRSPPD REARRVP+  G V+A Y  DNRNQRFNRHSEGSSSR  N+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 RSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRP 180
              S  R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  +SSA +SESMQ K QSQPQ P
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQISESMQGK-QSQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAEK DEAIRIFRKMQNNGI PNAFS+G+LIQGL K K+L+DAV+FC EMLESGH PN
Sbjct: 241 FCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGE 357
           LTTFVGLID LC E+GVDEAH+V+ET KQKGFLI+EK LR+FLNKRAPFSP +W++  G+
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGK 360

BLAST of Chy1G005550 vs. NCBI nr
Match: XP_004144563.1 (pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN43381.1 hypothetical protein Csa_020248 [Cucumis sativus])

HSP 1 Score: 648 bits (1672), Expect = 3.39e-233
Identity = 335/353 (94.90%), Postives = 341/353 (96.60%), Query Frame = 0

Query: 1   MGAFQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDRAF 60
           MGAFQ QSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSL PAQSRRFASNSMDDD AF
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 61  SESESINTPPQRRSPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRITNERSTSPQ 120
           S+SE INTPPQRR PPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSR TNE STSPQ
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEEN+SSAPVSESM EKQQS+PQRPPEADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           F KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQ+NGIPPNAFSFGVLIQGL KCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLG 353
           LIDALCNE+GVDEAHSVVETFKQKGFLIDEKALRE LNKRAPFSPD+WKVF G
Sbjct: 301 LIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREVLNKRAPFSPDIWKVFFG 353

BLAST of Chy1G005550 vs. NCBI nr
Match: XP_008462006.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >XP_008462007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >KAA0050550.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18790.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 630 bits (1625), Expect = 4.90e-226
Identity = 327/355 (92.11%), Postives = 336/355 (94.65%), Query Frame = 0

Query: 1   MGAFQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDRAF 60
           M AFQFQSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSLSPA SRRF+SNSMDDDRAF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SESESINTPPQRRSPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRITNERSTSPQ 120
           SESE  NTPPQRR PPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSR TNE STS Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEADEI 180
           RSESLSQKDFSFLEKFKLNTDNQSSG EKTEEN+SSAPVSESMQEKQQSQ QRPP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 180

Query: 181 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 240
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 240

Query: 241 FDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300
           FDEAIRIFRKMQN GI PNAFSFGVLIQGL KCKKLDDAVAFCNEMLESGHLPNLTTFVG
Sbjct: 241 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 300

Query: 301 LIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGEE 355
           LID LC+E+GVDEAH+VVETFKQKGFLIDEKALREFLNKRAPFSPD+WKVF G +
Sbjct: 301 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNK 355

BLAST of Chy1G005550 vs. NCBI nr
Match: XP_038888880.1 (pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hispida])

HSP 1 Score: 540 bits (1392), Expect = 1.64e-190
Identity = 297/358 (82.96%), Postives = 317/358 (88.55%), Query Frame = 0

Query: 3   AFQFQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDRAFSE 62
           AFQFQSRL+V KILSSTIRKWE DFPLLH+ LR P+FSLSPAQSR FASNS+DDD AFS+
Sbjct: 2   AFQFQSRLRVWKILSSTIRKWERDFPLLHDSLRMPNFSLSPAQSRCFASNSIDDDWAFSK 61

Query: 63  SESINTPPQRRSPP-DHREARRVPRGG--VTASY--DNRNQRFNRHSEGSSSRITNERST 122
           SE   +PPQRRSPP DHREARRVP     V+A +  DNRNQRFNR SEGSSSR  NE S 
Sbjct: 62  SEPRTSPPQRRSPPPDHREARRVPNFNKEVSAPFPDDNRNQRFNRRSEGSSSRFANEASI 121

Query: 123 SPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEA 182
           S QR+ESL+QKDFSFLE+FKLNTDNQSS  EKTEE +SSA +SESMQEKQ SQPQRPPEA
Sbjct: 122 SRQRNESLTQKDFSFLERFKLNTDNQSSSIEKTEE-SSSARLSESMQEKQ-SQPQRPPEA 181

Query: 183 DEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCK 242
           DEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCK
Sbjct: 182 DEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCK 241

Query: 243 AEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPNLTT 302
           AEK DEAIRIFRKMQNNGIPPNAFSFGVLIQGL KCKKL+DAVAFC EMLESGH PNL T
Sbjct: 242 AEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKKLEDAVAFCIEMLESGHSPNLNT 301

Query: 303 FVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGEE 355
           FVGLID LCNE+GVDEAHSVVET KQKGFLI+EKALRE LNKRAPFSP +W+V  G++
Sbjct: 302 FVGLIDELCNEKGVDEAHSVVETLKQKGFLINEKALRELLNKRAPFSPHIWEVVFGKK 357

BLAST of Chy1G005550 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522 bits (1344), Expect = 3.41e-183
Identity = 285/362 (78.73%), Postives = 312/362 (86.19%), Query Frame = 0

Query: 1   MGAFQFQ--SRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDR 60
           MGA Q Q  SRL+VSKILSSTIR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSESESINTPPQRRSPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRITNE 120
            FS+SE  ++PPQRRSPPD REARRVP+  G V+A Y  DNRNQRFNRHSEGSSSR  NE
Sbjct: 61  NFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 RSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRP 180
              S  R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  +SSA  SESMQ KQ SQPQ P
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQFSESMQGKQ-SQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAEKFDEAIRIFRKMQNNGI PNAFS+G+LIQGL K K+L+DAV+FC EMLESGH PN
Sbjct: 241 FCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGE 356
           LTTFVGLID LC E+GVDEAH+V+ET KQKGFLI+EK LREFLNKRAPFSP +W++  G+
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGK 360

BLAST of Chy1G005550 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 520 bits (1340), Expect = 1.38e-182
Identity = 285/362 (78.73%), Postives = 309/362 (85.36%), Query Frame = 0

Query: 1   MGAFQFQ--SRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLSPAQSRRFASNSMDDDR 60
           MGA Q Q  SRL+VSKIL STIR WE  FPLLH+PLRTPD SLSP +SR F+SNSMDDD 
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSESESINTPPQRRSPPDHREARRVPR--GGVTASY--DNRNQRFNRHSEGSSSRITNE 120
            FS SE  ++PPQRRSPPD REARRVP+  G V+A Y  DNRNQRFNRH EGS SR  NE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 RSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRP 180
              S +RSESLSQKDFSFLEKFKLNTDN S+  EKTE  +SSA  SESMQ KQ SQPQ P
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEP-SSSAQFSESMQGKQ-SQPQCP 180

Query: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDG 240
           PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDG
Sbjct: 181 PEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDG 240

Query: 241 FCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHLPN 300
           FCKAE  DEAIRIFRKMQNNGI PNAFS+GVLIQGL KCKKL+DAV+FC EMLESGH PN
Sbjct: 241 FCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPN 300

Query: 301 LTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKALREFLNKRAPFSPDMWKVFLGE 356
           LTTFVGLID LC E+GVDEAH+V+ET KQKGFLI+EKALREFLNKRAPFSP +W++  G+
Sbjct: 301 LTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGK 360

BLAST of Chy1G005550 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 267.3 bits (682), Expect = 1.8e-71
Identity = 149/271 (54.98%), Postives = 181/271 (66.79%), Query Frame = 0

Query: 95  NRNQRFNRHSEGSSSRITNERSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENA 154
           NR  R  R S  +S R    R          +  D  FLE+FKL  +  S    K E+  
Sbjct: 51  NRPLRGERSS--NSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQ-- 110

Query: 155 SSAPVSESMQEKQQSQPQRPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLF 214
                          +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLF
Sbjct: 111 ------------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLF 170

Query: 215 GLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKC 274
           GL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQNNGI PNAFS+GVL+QGL  C
Sbjct: 171 GLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNC 230

Query: 275 KKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKAL 334
             LDDAVAFC+EMLESGH PN+ TFV L+DALC  +GV++A S ++T  QKGF ++ KA+
Sbjct: 231 NMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAV 290

Query: 335 REFLNKRAPFSPDMWKVFLGEETNHITEKKP 365
           +EF++KRAPF    W+         I +KKP
Sbjct: 291 KEFMDKRAPFPSLAWEA--------IFKKKP 297

BLAST of Chy1G005550 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 267.3 bits (682), Expect = 1.8e-71
Identity = 149/271 (54.98%), Postives = 181/271 (66.79%), Query Frame = 0

Query: 95  NRNQRFNRHSEGSSSRITNERSTSPQRSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENA 154
           NR  R  R S  +S R    R          +  D  FLE+FKL  +  S    K E+  
Sbjct: 51  NRPLRGERSS--NSHREPPARQAHNLGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQ-- 110

Query: 155 SSAPVSESMQEKQQSQPQRPPE-ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLF 214
                          +P  PPE +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLF
Sbjct: 111 ------------YPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLF 170

Query: 215 GLIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKC 274
           GL+R+KGTIPEVVIYTAVV+ FCKA K ++A RIFRKMQNNGI PNAFS+GVL+QGL  C
Sbjct: 171 GLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNC 230

Query: 275 KKLDDAVAFCNEMLESGHLPNLTTFVGLIDALCNERGVDEAHSVVETFKQKGFLIDEKAL 334
             LDDAVAFC+EMLESGH PN+ TFV L+DALC  +GV++A S ++T  QKGF ++ KA+
Sbjct: 231 NMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAV 290

Query: 335 REFLNKRAPFSPDMWKVFLGEETNHITEKKP 365
           +EF++KRAPF    W+         I +KKP
Sbjct: 291 KEFMDKRAPFPSLAWEA--------IFKKKP 297

BLAST of Chy1G005550 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 2.6e-25
Identity = 86/276 (31.16%), Postives = 135/276 (48.91%), Query Frame = 0

Query: 63  SESINTPPQRRSPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRITNERSTSPQRS 122
           S  I+    R+ PP+ R  R   R     S  N N  F     G  +R  +  +      
Sbjct: 80  SAVIDAVHDRKLPPELRGRRDFVR-----SKRNSNSLFPWFCGGVFARQFSSETKRVNTK 139

Query: 123 ESLSQKDFSFLEKFKLNTDNQSSGKEKTEENASSAPVSESMQEKQQSQPQRPPEADEIFR 182
            + S  D    E+    T+ Q +   K +E     P     ++    +P+ P    EIF 
Sbjct: 140 VNFSLSDDDSDEE----TETQVTEDSKKQE-PPPPPYDPFSKKPAIEEPEDPKNLQEIFH 199

Query: 183 KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKFD 242
           KM+  G    AV M D L KDG   EA++LF  I++K  +P+VV +TA+V+ +  A +  
Sbjct: 200 KMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAK 259

Query: 243 EAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKL-DDAVAFCNEMLESGHLPNLTTFVGL 302
           E +++F +M  +G+ PNA+++ VLI+GL    K   DA  +  EM+ +G  PN  T+  +
Sbjct: 260 ETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAV 319

Query: 303 IDALCNERGVDEAHSVVETFKQKGFLIDEKALREFL 338
            +A   E   + A  +++  K KGF+ DEKA+RE L
Sbjct: 320 FEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 345

BLAST of Chy1G005550 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-24
Identity = 53/146 (36.30%), Postives = 85/146 (58.22%), Query Frame = 0

Query: 176 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 236 DGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHL 295
            GFC+     EA ++F +M   G+ P++ +F  LI G CK   + DA    N M+++G  
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 296 PNLTTFVGLIDALCNERGVDEAHSVV 319
           PN+ T+  LID LC E  +D A+ ++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELL 479

BLAST of Chy1G005550 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-24
Identity = 53/146 (36.30%), Postives = 85/146 (58.22%), Query Frame = 0

Query: 176 EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 235
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 236 DGFCKAEKFDEAIRIFRKMQNNGIPPNAFSFGVLIQGLCKCKKLDDAVAFCNEMLESGHL 295
            GFC+     EA ++F +M   G+ P++ +F  LI G CK   + DA    N M+++G  
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 296 PNLTTFVGLIDALCNERGVDEAHSVV 319
           PN+ T+  LID LC E  +D A+ ++
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELL 479

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SZL52.6e-7054.98Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX... [more]
Q0WVK71.8e-2336.30Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q6NQ833.1e-2330.46Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
Q9FIX31.2e-2234.39Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q9FNL21.2e-2235.06Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0K6C07.3e-18594.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1[more]
A0A1S3CFW02.7e-17992.11pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3D5J52.7e-17992.11Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1I1Q22.3e-14678.73pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O... [more]
A0A6J1GKZ08.7e-14677.90pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata... [more]
Match NameE-valueIdentityDescription
XP_004144563.13.39e-23394.90pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN4338... [more]
XP_008462006.14.90e-22692.11PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] ... [more]
XP_038888880.11.64e-19082.96pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hisp... [more]
KAG7011839.13.41e-18378.73Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022969144.11.38e-18278.73pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X... [more]
Match NameE-valueIdentityDescription
AT4G38150.11.8e-7154.98Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G38150.21.8e-7154.98Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G03560.22.6e-2531.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.11.3e-2436.30Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.21.3e-2436.30Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 223..272
e-value: 5.8E-17
score: 61.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 195..223
e-value: 8.0E-5
score: 20.6
coord: 262..294
e-value: 2.6E-7
score: 28.4
coord: 226..260
e-value: 1.4E-10
score: 38.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 195..220
e-value: 6.0E-5
score: 23.0
coord: 297..326
e-value: 0.37
score: 11.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 8.582755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..258
score: 13.241308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 259..293
score: 11.586152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 294..328
score: 8.681407
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 153..351
e-value: 6.4E-38
score: 132.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..129
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 5..357
NoneNo IPR availablePANTHERPTHR45613:SF39PPR CONTAINING PLANT-LIKE PROTEINcoord: 5..357

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G005550.1Chy1G005550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding