Chy1G004290 (gene) Cucumber (hystrix) v1

Overview
NameChy1G004290
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH01: 3051858 .. 3052038 (+)
RNA-Seq ExpressionChy1G004290
SyntenyChy1G004290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGACGATCAGGATGAGGATAAGGAGAAAGTTATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGAGGAAGGAAGGGGCGTGTGGAGATTGGAAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGG

mRNA sequence

ATGAATGACGATCAGGATGAGGATAAGGAGAAAGTTATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGAGGAAGGAAGGGGCGTGTGGAGATTGGAAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGG

Coding sequence (CDS)

ATGAATGACGATCAGGATGAGGATAAGGAGAAAGTTATGGGGAGCCTGGAAGTGGGAGAAGAAATGGAGATGGTGGAGGTCGTCGTTCTCAGGGAGAGGAAGGAAGGGGCGTGTGGAGATTGGAAAGGGAATGAGAGACTTAGGGCTGCGTGCCACTTTGTTCTTGGAACTGATCTGGCGG

Protein sequence

MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLRERKEGACGDWKGNERLRAACHFVLGTDLAX
Homology
[Close]
BLAST of Chy1G004290 vs. ExPASy TrEMBL
Match: A0A0A0K1L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043620 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.1e-17
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 13 MGSLEVGEEMEMVEVVVLRERKEGACGDWKGNERLRAACHFVLGTDLA 61
          MGSLEVGEEMEMVEVVVLRE K+GACGDW+GNERLRAACHFVLGTDLA
Sbjct: 1  MGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA 48

[Close]
BLAST of Chy1G004290 vs. NCBI nr
Match: KGN43560.2 (hypothetical protein Csa_020214, partial [Cucumis sativus])

HSP 1 Score: 116 bits (291), Expect = 1.15e-32
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 1  MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLRERKEGACGDWKGNERLRAACHFVLGTDLA 60
          MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLRE K+GACGDW+GNERLRAACHFVLGTDLA
Sbjct: 1  MNDDQDEDKEKVMGSLEVGEEMEMVEVVVLREGKKGACGDWEGNERLRAACHFVLGTDLA 60

The following BLAST results are available for this feature:
BLAST of Chy1G004290 vs.
Match NameE-valueIdentityDescription
BLAST of Chy1G004290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1L48.1e-1793.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043620 PE=4 SV=1[more]
BLAST of Chy1G004290 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43560.21.15e-3295.00hypothetical protein Csa_020214, partial [Cucumis sativus][more]
BLAST of Chy1G004290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy1G004290.1Chy1G004290.1mRNA