Chy1G001990 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G001990
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH01: 1348448 .. 1349947 (+)
RNA-Seq Expression	Chy1G001990
Synteny	Chy1G001990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCCAAATCTATTGGCTTCGTATATCCATTTCTTTCTAATCGGATCACCTCATATTTCTTCACTATTTCTTCAACACAACGAAATCTGAATTCTGAATCTGTTTGTGGTCGTCCTCATGATGCAGTTATCAATGCTTCTCTTCAATCTCAACTATTAGAACAATCCCTTGATAGTTTTAAACTAATGGTCCTTAAAGGGCATTATCCGAGTTCATTCTCTTTCAATAATGTATTGGATTTACTTGCTAAATCAGGGAATCTGGATAGAACTTGGTGGTTTTTCACTGAATATTTGGGGAGGACTCAGTTTGATGTGTCTAGTTTTGGGATTACGATTAAAGCCTTTTGTGAAAATGGCAATGTAAGTAAAGGCTTTGAGCTTTTGGCTCAAATGGAGACGATGGGTGTGTCTCCTAATGATTTTATATACACTATCTTGATTGAAGCTTGTTGCAGAAATGGTGACATTGATCAAGCTAAAGTAATGTTTTCTAGGATGGATGACCTTGGTTTGGCTGCTAACCAATATATTTATACTATCATGATCAATGGATTTTTCAAGAAAGGTTACAAGAAGGATGGTTTTGAGCTTTATGAGAAGATGAAGCTTGTGGGGGTGCTTCCCAATTTATATACTTACAACAGTCTCATTACTGAATATTGTAGGGATGGAAAATTGAGCCTTGCCTTTAAGTTATTTGATGAAATATCTAAAAGAGAGGTGACATGTAATGTAGTCACATACAATATTCTAATAGGTGGGTTATGCCGTAAGGGACAAGTGTCGAAAGCTGAAGGACTGTTAGAACGAATGAAACGAGCTCATATAAATCCAACTACTAGAACATTTAACATGTTGATGGATGGGTCGTGTAACGCTGGACAGTTGGACAAGGCCTTAAGTTATCTCGAAAAAATGAAGTTGATTGGTTTATCTCCAACGCTAGTGACCTACAATATTTTAATTTCAGGTTTCTTTAAAATAGGAAATTCTTCTGTAGTTTCAGAGTTAGTGAGGGAGATGGAGGACAGAGGAATTTCTCCCTCAAAAGTGACGTATACAATTTTGATGAATGCGTTTGTTCGATCTGATGATATAGAGAAAGCCTATGAGATGTTTCATCTCATGAAGAGAATTGGTTTGGTCCCTGATCAGCATACCTATGGTGTCCTAATCCATGGTTTGTGCATAAAAGGTAATATGGTTGAGGCATCAAAACTATACAAATCAATGGTAGAGATGCATCTACATCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAGTGCAACTCCTACAAGGCCTTAAAGTTTCTTGAAGAGATGGTTAAAAATGGAGTAACTCCAAATGTGGCTAGTTATATTTCCACCATTCAAGTCCTTTGCAAGGACGGGAAGTCGATTGAGGCGAAACGTTTACTTAAAGAGATGACTGAAGCCGGGTTGAAGCCTCCAGAATCTCTATGTAGTAAAGTTGGTTAA

mRNA sequence

ATGGTGCCCAAATCTATTGGCTTCGTATATCCATTTCTTTCTAATCGGATCACCTCATATTTCTTCACTATTTCTTCAACACAACGAAATCTGAATTCTGAATCTGTTTGTGGTCGTCCTCATGATGCAGTTATCAATGCTTCTCTTCAATCTCAACTATTAGAACAATCCCTTGATAGTTTTAAACTAATGGTCCTTAAAGGGCATTATCCGAGTTCATTCTCTTTCAATAATGTATTGGATTTACTTGCTAAATCAGGGAATCTGGATAGAACTTGGTGGTTTTTCACTGAATATTTGGGGAGGACTCAGTTTGATGTGTCTAGTTTTGGGATTACGATTAAAGCCTTTTGTGAAAATGGCAATGTAAGTAAAGGCTTTGAGCTTTTGGCTCAAATGGAGACGATGGGTGTGTCTCCTAATGATTTTATATACACTATCTTGATTGAAGCTTGTTGCAGAAATGGTGACATTGATCAAGCTAAAGTAATGTTTTCTAGGATGGATGACCTTGGTTTGGCTGCTAACCAATATATTTATACTATCATGATCAATGGATTTTTCAAGAAAGGTTACAAGAAGGATGGTTTTGAGCTTTATGAGAAGATGAAGCTTGTGGGGGTGCTTCCCAATTTATATACTTACAACAGTCTCATTACTGAATATTGTAGGGATGGAAAATTGAGCCTTGCCTTTAAGTTATTTGATGAAATATCTAAAAGAGAGGTGACATGTAATGTAGTCACATACAATATTCTAATAGGTGGGTTATGCCGTAAGGGACAAGTGTCGAAAGCTGAAGGACTGTTAGAACGAATGAAACGAGCTCATATAAATCCAACTACTAGAACATTTAACATGTTGATGGATGGGTCGTGTAACGCTGGACAGTTGGACAAGGCCTTAAGTTATCTCGAAAAAATGAAGTTGATTGGTTTATCTCCAACGCTAGTGACCTACAATATTTTAATTTCAGGTTTCTTTAAAATAGGAAATTCTTCTGTAGTTTCAGAGTTAGTGAGGGAGATGGAGGACAGAGGAATTTCTCCCTCAAAAGTGACGTATACAATTTTGATGAATGCGTTTGTTCGATCTGATGATATAGAGAAAGCCTATGAGATGTTTCATCTCATGAAGAGAATTGGTTTGGTCCCTGATCAGCATACCTATGGTGTCCTAATCCATGGTTTGTGCATAAAAGGTAATATGGTTGAGGCATCAAAACTATACAAATCAATGGTAGAGATGCATCTACATCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAGTGCAACTCCTACAAGGCCTTAAAGTTTCTTGAAGAGATGGTTAAAAATGGAGTAACTCCAAATGTGGCTAGTTATATTTCCACCATTCAAGTCCTTTGCAAGGACGGGAAGTCGATTGAGGCGAAACGTTTACTTAAAGAGATGACTGAAGCCGGGTTGAAGCCTCCAGAATCTCTATGTAGTAAAGTTGGTTAA

Coding sequence (CDS)

ATGGTGCCCAAATCTATTGGCTTCGTATATCCATTTCTTTCTAATCGGATCACCTCATATTTCTTCACTATTTCTTCAACACAACGAAATCTGAATTCTGAATCTGTTTGTGGTCGTCCTCATGATGCAGTTATCAATGCTTCTCTTCAATCTCAACTATTAGAACAATCCCTTGATAGTTTTAAACTAATGGTCCTTAAAGGGCATTATCCGAGTTCATTCTCTTTCAATAATGTATTGGATTTACTTGCTAAATCAGGGAATCTGGATAGAACTTGGTGGTTTTTCACTGAATATTTGGGGAGGACTCAGTTTGATGTGTCTAGTTTTGGGATTACGATTAAAGCCTTTTGTGAAAATGGCAATGTAAGTAAAGGCTTTGAGCTTTTGGCTCAAATGGAGACGATGGGTGTGTCTCCTAATGATTTTATATACACTATCTTGATTGAAGCTTGTTGCAGAAATGGTGACATTGATCAAGCTAAAGTAATGTTTTCTAGGATGGATGACCTTGGTTTGGCTGCTAACCAATATATTTATACTATCATGATCAATGGATTTTTCAAGAAAGGTTACAAGAAGGATGGTTTTGAGCTTTATGAGAAGATGAAGCTTGTGGGGGTGCTTCCCAATTTATATACTTACAACAGTCTCATTACTGAATATTGTAGGGATGGAAAATTGAGCCTTGCCTTTAAGTTATTTGATGAAATATCTAAAAGAGAGGTGACATGTAATGTAGTCACATACAATATTCTAATAGGTGGGTTATGCCGTAAGGGACAAGTGTCGAAAGCTGAAGGACTGTTAGAACGAATGAAACGAGCTCATATAAATCCAACTACTAGAACATTTAACATGTTGATGGATGGGTCGTGTAACGCTGGACAGTTGGACAAGGCCTTAAGTTATCTCGAAAAAATGAAGTTGATTGGTTTATCTCCAACGCTAGTGACCTACAATATTTTAATTTCAGGTTTCTTTAAAATAGGAAATTCTTCTGTAGTTTCAGAGTTAGTGAGGGAGATGGAGGACAGAGGAATTTCTCCCTCAAAAGTGACGTATACAATTTTGATGAATGCGTTTGTTCGATCTGATGATATAGAGAAAGCCTATGAGATGTTTCATCTCATGAAGAGAATTGGTTTGGTCCCTGATCAGCATACCTATGGTGTCCTAATCCATGGTTTGTGCATAAAAGGTAATATGGTTGAGGCATCAAAACTATACAAATCAATGGTAGAGATGCATCTACATCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAGTGCAACTCCTACAAGGCCTTAAAGTTTCTTGAAGAGATGGTTAAAAATGGAGTAACTCCAAATGTGGCTAGTTATATTTCCACCATTCAAGTCCTTTGCAAGGACGGGAAGTCGATTGAGGCGAAACGTTTACTTAAAGAGATGACTGAAGCCGGGTTGAAGCCTCCAGAATCTCTATGTAGTAAAGTTGGTTAA

Protein sequence

MVPKSIGFVYPFLSNRITSYFFTISSTQRNLNSESVCGRPHDAVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVG*

Homology

[Close]

BLAST of Chy1G001990 vs. ExPASy Swiss-Prot
Match: Q9T0D6 (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX=3702 GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 1.3e-138
Identity = 247/489 (50.51%), Postives = 338/489 (69.12%), Query Frame = 0


Query: 13  LSNRITSYFFTISSTQRNLNSESVCG---RPHDAVINASLQSQLLEQSLDSFKLMVLKGH 72
           +S +I S FFT SS    L          R ++ +IN+ +QSQ L  S+  F  MV  G 
Sbjct: 66  ISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGF 125

Query: 73  YPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIKAFCENGNVSKGFEL 132
            P S  FN +L  +  S + ++ W FF E   +   DV SFGI IK  CE G + K F+L
Sbjct: 126 VPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185

Query: 133 LAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFK 192
           L ++   G SPN  IYT LI+ CC+ G+I++AK +F  M  LGL AN+  YT++ING FK
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 193 KGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLFDEISKREVTCNVVT 252
            G KK GFE+YEKM+  GV PNLYTYN ++ + C+DG+   AF++FDE+ +R V+CN+VT
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305

Query: 253 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNAGQLDKALSYLEKMK 312
           YN LIGGLCR+ ++++A  ++++MK   INP   T+N L+DG C  G+L KALS    +K
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365

Query: 313 LIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTYTILMNAFVRSDDIE 372
             GLSP+LVTYNIL+SGF + G++S  +++V+EME+RGI PSKVTYTIL++ F RSD++E
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425

Query: 373 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLHPNDVIYNTMI 432
           KA ++   M+ +GLVPD HTY VLIHG CIKG M EAS+L+KSMVE +  PN+VIYNTMI
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485

Query: 433 NGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAGLK 492
            GYCKE +SY+ALK L+EM +  + PNVASY   I+VLCK+ KS EA+RL+++M ++G+ 
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545

Query: 493 PPESLCSKV 499
           P  S+ S +
Sbjct: 546 PSTSILSLI 554

[Close]

BLAST of Chy1G001990 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.7e-64
Identity = 145/444 (32.66%), Postives = 233/444 (52.48%), Query Frame = 0


Query: 42  DAVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKS-GNLDRTWWFFTEYL 101
           D V+ +  +  L++++L    L    G  P   S+N VLD   +S  N+      F E L
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197

Query: 102 -GRTQFDVSSFGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDID 161
             +   +V ++ I I+ FC  GN+     L  +MET G  PN   Y  LI+  C+   ID
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257

Query: 162 QAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLI 221
               +   M   GL  N   Y ++ING  ++G  K+   +  +M   G   +  TYN+LI
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317

Query: 222 TEYCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHIN 281
             YC++G    A  +  E+ +  +T +V+TY  LI  +C+ G +++A   L++M+   + 
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377

Query: 282 PTTRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSEL 341
           P  RT+  L+DG    G +++A   L +M   G SP++VTYN LI+G    G       +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437

Query: 342 VREMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 401
           + +M+++G+SP  V+Y+ +++ F RS D+++A  +   M   G+ PD  TY  LI G C 
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497

Query: 402 KGNMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 461
           +    EA  LY+ M+ + L P++  Y  +IN YC E +  KAL+   EMV+ GV P+V +
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557

Query: 462 YISTIQVLCKDGKSIEAKRLLKEM 484
           Y   I  L K  ++ EAKRLL ++
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKL 581

[Close]

BLAST of Chy1G001990 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 6.5e-61
Identity = 124/446 (27.80%), Postives = 231/446 (51.79%), Query Frame = 0


Query: 43  AVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGR 102
           +++N    S+ + +++     M + G+ P++ +FN ++  L                + +
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215

Query: 103 -TQFDVSSFGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQA 162
             Q D+ ++G+ +   C+ G+    F LL +ME   + P   IY  +I+  C+   +D A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275

Query: 163 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITE 222
             +F  M+  G+  N   Y+ +I+     G   D   L   M    + P+++T+++LI  
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 223 YCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPT 282
           + ++GKL  A KL+DE+ KR +  ++VTY+ LI G C   ++ +A+ + E M   H  P 
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 283 TRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVR 342
             T+N L+ G C   ++++ +    +M   GL    VTYNILI G F+ G+  +  E+ +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455

Query: 343 EMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 402
           EM   G+ P+ +TY  L++   ++  +EKA  +F  ++R  + P  +TY ++I G+C  G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 403 NMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYI 462
            + +   L+ ++    + P+ V YNTMI+G+C++ +  +A    +EM ++G  PN   Y 
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

Query: 463 STIQVLCKDGKSIEAKRLLKEMTEAG 488
           + I+   +DG    +  L+KEM   G
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCG 601

[Close]

BLAST of Chy1G001990 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-60
Identity = 128/428 (29.91%), Postives = 218/428 (50.93%), Query Frame = 0


Query: 68  GHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQF--DVSSFGITIKAFCENGNVSK 127
           G  P   ++N ++    K+G ++         L R     DV ++   +++ C++G + +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNA----LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 226

Query: 128 GFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMIN 187
             E+L +M      P+   YTILIEA CR+  +  A  +   M D G   +   Y +++N
Sbjct: 227 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 286

Query: 188 GFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLFDEISKREVTC 247
           G  K+G   +  +    M   G  PN+ T+N ++   C  G+   A KL  ++ ++  + 
Sbjct: 287 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 346

Query: 248 NVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNAGQLDKALSYL 307
           +VVT+NILI  LCRKG + +A  +LE+M +    P + ++N L+ G C   ++D+A+ YL
Sbjct: 347 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 406

Query: 308 EKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTYTILMNAFVRS 367
           E+M   G  P +VTYN +++   K G      E++ ++  +G SP  +TY  +++   ++
Sbjct: 407 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 466

Query: 368 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLHPNDVIY 427
               KA ++   M+   L PD  TY  L+ GL  +G + EA K +     M + PN V +
Sbjct: 467 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 526

Query: 428 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTE 487
           N+++ G CK   + +A+ FL  M+  G  PN  SY   I+ L  +G + EA  LL E+  
Sbjct: 527 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 586

Query: 488 AGLKPPES 494
            GL    S
Sbjct: 587 KGLMKKSS 590

[Close]

BLAST of Chy1G001990 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.9e-60
Identity = 128/450 (28.44%), Postives = 231/450 (51.33%), Query Frame = 0


Query: 41  HDAVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYL 100
           ++ VI+   Q   ++++     LM LKG+ P   S++ V++   + G LD+ W    E +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI-EVM 308

Query: 101 GRTQFDVSS--FGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDI 160
            R     +S  +G  I   C    +++  E  ++M   G+ P+  +YT LI+  C+ GDI
Sbjct: 309 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 368

Query: 161 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSL 220
             A   F  M    +  +   YT +I+GF + G   +  +L+ +M   G+ P+  T+  L
Sbjct: 369 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 428

Query: 221 ITEYCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 280
           I  YC+ G +  AF++ + + +   + NVVTY  LI GLC++G +  A  LL  M +  +
Sbjct: 429 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 488

Query: 281 NPTTRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSE 340
            P   T+N +++G C +G +++A+  + + +  GL+   VTY  L+  + K G      E
Sbjct: 489 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 548

Query: 341 LVREMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 400
           +++EM  +G+ P+ VT+ +LMN F     +E   ++ + M   G+ P+  T+  L+   C
Sbjct: 549 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 608

Query: 401 IKGNMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVA 460
           I+ N+  A+ +YK M    + P+   Y  ++ G+CK  N  +A    +EM   G + +V+
Sbjct: 609 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 668

Query: 461 SYISTIQVLCKDGKSIEAKRLLKEMTEAGL 489
           +Y   I+   K  K +EA+ +  +M   GL
Sbjct: 669 TYSVLIKGFLKRKKFLEAREVFDQMRREGL 697

[Close]

BLAST of Chy1G001990 vs. ExPASy TrEMBL
Match: A0A5D3C6B4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001850 PE=4 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 3.1e-271
Identity = 471/504 (93.45%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTIS-----STQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MVPKSIGFVYPFLSNRITS FFTIS     STQRNLNSESVCGRPHDAVINASLQS  LE
Sbjct: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSLDSFKLMVLKGH PSS+SFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDV SFGITIK
Sbjct: 61  QSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGNVSKGFELLAQMETMGVSPN FIYTILIEACC+NGDIDQAKVMFSRMDDLGLAA
Sbjct: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           +QYIYT+MINGFFKKGYKKDGFELYEKMKL+GVLPNLYTYNSLITEYCRDGKLSLAFKLF
Sbjct: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DEISKR V CN VTYNILIGGLCRKGQV KAEGLLERMKRAHINPTTRTFN+LMDG CN 
Sbjct: 241 DEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+LDKALSYL+K+KLIG SPTLVTYNILISGF K+GNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI+GNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           MHL PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 500
           AKRLLKEMTEAGLKPPESL SKVG
Sbjct: 481 AKRLLKEMTEAGLKPPESLRSKVG 504

[Close]

BLAST of Chy1G001990 vs. ExPASy TrEMBL
Match: A0A1S3C0B2 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucumis melo OX=3656 GN=LOC103495373 PE=4 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 3.1e-271
Identity = 471/504 (93.45%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTIS-----STQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MVPKSIGFVYPFLSNRITS FFTIS     STQRNLNSESVCGRPHDAVINASLQS  LE
Sbjct: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSLDSFKLMVLKGH PSS+SFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDV SFGITIK
Sbjct: 61  QSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGNVSKGFELLAQMETMGVSPN FIYTILIEACC+NGDIDQAKVMFSRMDDLGLAA
Sbjct: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           +QYIYT+MINGFFKKGYKKDGFELYEKMKL+GVLPNLYTYNSLITEYCRDGKLSLAFKLF
Sbjct: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DEISKR V CN VTYNILIGGLCRKGQV KAEGLLERMKRAHINPTTRTFN+LMDG CN 
Sbjct: 241 DEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+LDKALSYL+K+KLIG SPTLVTYNILISGF K+GNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI+GNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           MHL PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 500
           AKRLLKEMTEAGLKPPESL SKVG
Sbjct: 481 AKRLLKEMTEAGLKPPESLRSKVG 504

[Close]

BLAST of Chy1G001990 vs. ExPASy TrEMBL
Match: A0A6J1I748 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita maxima OX=3661 GN=LOC111470611 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.9e-225
Identity = 391/504 (77.58%), Postives = 445/504 (88.29%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTIS-----STQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MVPKSIGF++ FLSNRITS FFTIS     STQ NLNS       H+A+INASLQSQLLE
Sbjct: 1   MVPKSIGFLHSFLSNRITSSFFTISSILTYSTQPNLNS-------HEAIINASLQSQLLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSL SFKLM+L+GH PSS SFNNVL LLAKSG+L +TW FFTE+LGRT+FD  SFGITIK
Sbjct: 61  QSLHSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWCFFTEFLGRTRFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPN  IYTILI+ACC+NGDI+QAKV+FS+M+DLG  A
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGFVA 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           NQY YT MINGFFKKGYKKDGFELYEKMKLVGVLP+LYTYN+LI EYCRDGKLS+AFK+F
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELYEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DE+S R V+CNVVTY ILIGGLCRK Q+SKAE L ERMK+ HINPTTRT+N+LMDG CN 
Sbjct: 241 DEMSTRGVSCNVVTYTILIGGLCRKRQMSKAERLFERMKQVHINPTTRTYNLLMDGFCNI 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+L+KAL Y +K+KLIGL+PT V+YNILI+GF K GNS+VVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLEKALGYFDKLKLIGLAPTSVSYNILIAGFSKAGNSAVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC+KGNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVEASKLYKSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           M++ PNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ASY STI+VLC +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLASYSSTIEVLCNEGKSTE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 500
           AKRLLKEM EAGL P ESL  K+G
Sbjct: 481 AKRLLKEMIEAGLNPSESLYCKLG 497

[Close]

BLAST of Chy1G001990 vs. ExPASy TrEMBL
Match: A0A6J1GM09 (pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita moschata OX=3662 GN=LOC111455596 PE=4 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 1.6e-219
Identity = 380/504 (75.40%), Postives = 438/504 (86.90%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTIS-----STQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MVPKSI FV+ FLSNRITS F TIS     STQ NLNS       H+A+ +ASLQSQ LE
Sbjct: 1   MVPKSIAFVHSFLSNRITSSFLTISSILTYSTQPNLNS-------HEAITSASLQSQQLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSL+SFKLM+L+GH PS+ SFNNVL LLAKSG+L +TWWFFTE+LGRT FD  SFGITIK
Sbjct: 61  QSLNSFKLMILQGHCPSAISFNNVLGLLAKSGDLHKTWWFFTEFLGRTHFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPN  IYTILI+ACC+NGDI+QAKV+FS+M+DLGL A
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGLVA 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           NQY YT MINGFFKKGYKKDGFEL+EKMKLVGVLP+LYTYN+LI EYCRDGKLS+AFK+F
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELFEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DE+S   V+CNVVTY ILIGGLCRK Q++KAE L ERMK+  INPTTRT+N+LMDG CN 
Sbjct: 241 DEMSTSGVSCNVVTYTILIGGLCRKRQLTKAERLFERMKQVRINPTTRTYNLLMDGFCNI 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+L+KAL Y +++KLIGL+PT V+YNILI+GF K GNSSVVSELVREMEDRG+SPSKVTY
Sbjct: 301 GKLEKALGYFDELKLIGLAPTSVSYNILIAGFSKAGNSSVVSELVREMEDRGVSPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC+KGNMVEASKLY SMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVEASKLYNSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           M++ PNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ SY STI+VL  +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLTSYKSTIEVLYNEGKSTE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 500
           AK LLKEM EAGL P ESLC K+G
Sbjct: 481 AKCLLKEMIEAGLNPSESLCCKLG 497

[Close]

BLAST of Chy1G001990 vs. ExPASy TrEMBL
Match: A0A6J1C8X2 (pentatricopeptide repeat-containing protein At4g11690 OS=Momordica charantia OX=3673 GN=LOC111008514 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 8.2e-216
Identity = 381/520 (73.27%), Postives = 431/520 (82.88%), Query Frame = 0


Query: 1   MVPKSIGFVYPF----------------LSNRITSYFFTIS-----STQRNLNSESVCGR 60
           MVPK  GFV+ F                LSNRI S+FFTIS     ST+ NLN+  +CG 
Sbjct: 1   MVPKFTGFVHHFLASDMRPQVHSIPVQVLSNRIFSHFFTISSILTHSTRSNLNNYPLCGC 60

Query: 61  PHDAVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEY 120
           PH+A+I+A +QSQL EQSL+ FKLMVLKG  PSS SFNNVL LL KSG+L++ W FF E+
Sbjct: 61  PHEAIISAHVQSQLPEQSLNHFKLMVLKGLCPSSNSFNNVLGLLTKSGDLNKAWCFFNEF 120

Query: 121 LGRTQFDVSSFGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDID 180
           LGRT FDV SFGI IKAFCE GNVSKGFELLAQME MG+SPN  IYTILI+ACC+NGDI+
Sbjct: 121 LGRTHFDVYSFGIMIKAFCEGGNVSKGFELLAQMERMGLSPNVVIYTILIDACCKNGDIE 180

Query: 181 QAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLI 240
           QAKV+FS+M DLGL ANQY YT+MING FKKG KKDGFELYEKM L+GV P++YTYNSLI
Sbjct: 181 QAKVLFSKMGDLGLVANQYTYTVMINGLFKKGCKKDGFELYEKMNLIGVFPSVYTYNSLI 240

Query: 241 TEYCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHIN 300
            EYCRDG L LAFKLFDE+  R V+CNVVTYNILIGGLCR  QV KAE LLE+MK AHIN
Sbjct: 241 NEYCRDGTLCLAFKLFDEMRTRGVSCNVVTYNILIGGLCRNRQVLKAEWLLEQMKLAHIN 300

Query: 301 PTTRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSEL 360
           P+T TFN+LMDG CN G+ DKALSY +++KLIGLSPT VTYNILI+GF K GNS+VV EL
Sbjct: 301 PSTITFNLLMDGFCNVGKFDKALSYFDELKLIGLSPTSVTYNILIAGFSKAGNSAVVCEL 360

Query: 361 VREMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 420
           VREMEDRGISPSKVTYTILM+AFVRSDD+ KA +MFHLMK++G VPDQ+TYGVL+HGLC+
Sbjct: 361 VREMEDRGISPSKVTYTILMDAFVRSDDVGKASQMFHLMKKVGSVPDQYTYGVLMHGLCM 420

Query: 421 KGNMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 480
           KGNMVEASKLYKSM+E HL PNDVIYNTMINGYCKECNSYKALKFL+EMV+ G+TP+ AS
Sbjct: 421 KGNMVEASKLYKSMIETHLQPNDVIYNTMINGYCKECNSYKALKFLQEMVRKGMTPSQAS 480

Query: 481 YISTIQVLCKDGKSIEAKRLLKEMTEAGLKPPESLCSKVG 500
           Y STI+VLCKDGKS EAK LLKEM E GL P ESLC +VG
Sbjct: 481 YSSTIEVLCKDGKSTEAKELLKEMIENGLDPSESLCRRVG 520

[Close]

BLAST of Chy1G001990 vs. NCBI nr
Match: XP_004137069.1 (pentatricopeptide repeat-containing protein At4g11690 [Cucumis sativus] >KGN43842.2 hypothetical protein Csa_017240 [Cucumis sativus])

HSP 1 Score: 957 bits (2473), Expect = 0.0
Identity = 478/499 (95.79%), Postives = 483/499 (96.79%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTISSTQRNLNSESVCGRPHDAVINASLQSQLLEQSLDS 60
           MVPKSIGFVYPFLSNRITSYFFTISSTQRNLNSESVCGRP DAVINAS QSQLLEQSLDS
Sbjct: 1   MVPKSIGFVYPFLSNRITSYFFTISSTQRNLNSESVCGRPRDAVINASFQSQLLEQSLDS 60

Query: 61  FKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIKAFCEN 120
           FKLMVLKGH PSSFSFNN LDLLAKSGNLDRTW FFTEYLGRTQFDV SFGITIKAFCEN
Sbjct: 61  FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCEN 120

Query: 121 GNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIY 180
           GNVSKGFELLAQMETMGVSPN FIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIY
Sbjct: 121 GNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIY 180

Query: 181 TIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLFDEISK 240
           TIMINGFFKKGYKKDGFELY+KMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK+FDEISK
Sbjct: 181 TIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISK 240

Query: 241 REVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNAGQLDK 300
           R V CN VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDG CN GQLDK
Sbjct: 241 RGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDK 300

Query: 301 ALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTYTILMN 360
           ALSYLEK+KLIGL PTLVTYNILISGF K+GNSSVVSELVREMEDRGISPSKVTYTILMN
Sbjct: 301 ALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMN 360

Query: 361 AFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLHP 420
            FVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHL P
Sbjct: 361 TFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQP 420

Query: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLL 480
           NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQ+LCKDGKSIEAKRLL
Sbjct: 421 NDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLL 480

Query: 481 KEMTEAGLKPPESLCSKVG 499
           KEMTEAGLKPPESLCSKVG
Sbjct: 481 KEMTEAGLKPPESLCSKVG 499

[Close]

BLAST of Chy1G001990 vs. NCBI nr
Match: XP_008455127.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis melo] >KAA0031429.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06880.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 938 bits (2424), Expect = 0.0
Identity = 471/504 (93.45%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTISS-----TQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MVPKSIGFVYPFLSNRITS FFTISS     TQRNLNSESVCGRPHDAVINASLQS  LE
Sbjct: 1   MVPKSIGFVYPFLSNRITSSFFTISSLLTYSTQRNLNSESVCGRPHDAVINASLQSPQLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSLDSFKLMVLKGH PSS+SFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDV SFGITIK
Sbjct: 61  QSLDSFKLMVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGNVSKGFELLAQMETMGVSPN FIYTILIEACC+NGDIDQAKVMFSRMDDLGLAA
Sbjct: 121 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAA 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           +QYIYT+MINGFFKKGYKKDGFELYEKMKL+GVLPNLYTYNSLITEYCRDGKLSLAFKLF
Sbjct: 181 DQYIYTVMINGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DEISKR V CN VTYNILIGGLCRKGQV KAEGLLERMKRAHINPTTRTFN+LMDG CN 
Sbjct: 241 DEISKRGVACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNT 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+LDKALSYL+K+KLIG SPTLVTYNILISGF K+GNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI+GNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           MHL PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 499
           AKRLLKEMTEAGLKPPESL SKVG
Sbjct: 481 AKRLLKEMTEAGLKPPESLRSKVG 504

[Close]

BLAST of Chy1G001990 vs. NCBI nr
Match: XP_038887006.1 (pentatricopeptide repeat-containing protein At4g11690 [Benincasa hispida])

HSP 1 Score: 824 bits (2128), Expect = 3.99e-298
Identity = 415/504 (82.34%), Postives = 447/504 (88.69%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTISS-----TQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MV KSIGFV PFL NRITS FFT SS     TQ NLN +S CG  H A+INASLQSQ LE
Sbjct: 1   MVSKSIGFVNPFLPNRITSSFFTNSSILTYSTQPNLNYDSACGFSHYAIINASLQSQPLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSL +FKLMVLKG+ PSS SFNNVL  LAKSGNL RTWWFF+E+L RTQFDV SFGITIK
Sbjct: 61  QSLHNFKLMVLKGYCPSSSSFNNVLGQLAKSGNLHRTWWFFSEFLERTQFDVYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFCENGN+SKGF+LLAQME MG+S N  IYTILI+ACC+NGDI+QAKV+FSRMDDLGL A
Sbjct: 121 AFCENGNISKGFDLLAQMERMGLSANVVIYTILIDACCKNGDIEQAKVLFSRMDDLGLVA 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           N Y YT+MINGFFKKGY+KDGFELYEKMKLVGVLP LYTYNSLI EYCRDGKLSLAFKLF
Sbjct: 181 NHYTYTVMINGFFKKGYQKDGFELYEKMKLVGVLPTLYTYNSLINEYCRDGKLSLAFKLF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DE+S R V+CNV+TYNILIGGLCRK QVSKAE LLE+MK+AHINPTTRTFN+L+DG CN 
Sbjct: 241 DEMSTRGVSCNVITYNILIGGLCRKRQVSKAEWLLEQMKQAHINPTTRTFNLLIDGLCNT 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+LDKALSY +KMKLIG SPT VTYNILI+GF K+GNSSVVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLDKALSYFDKMKLIGQSPTSVTYNILIAGFSKVGNSSVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDD+EKAYEMF LMK+IG VPDQHTYGVLIHGLC+KGNMVEASKLYKSMVE
Sbjct: 361 TILMHAFVRSDDVEKAYEMFRLMKKIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           MHL PNDVIYNTMINGYCKECNSYKALKFLEEMVK GVTP+VASY  TI VLC +GKS E
Sbjct: 421 MHLEPNDVIYNTMINGYCKECNSYKALKFLEEMVKKGVTPSVASYSFTIAVLCNEGKSTE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 499
           AK LLKEM EAGLKP ESLC KVG
Sbjct: 481 AKHLLKEMIEAGLKPSESLCCKVG 504

[Close]

BLAST of Chy1G001990 vs. NCBI nr
Match: XP_022971940.1 (pentatricopeptide repeat-containing protein At4g11690 [Cucurbita maxima])

HSP 1 Score: 786 bits (2030), Expect = 2.55e-283
Identity = 391/504 (77.58%), Postives = 445/504 (88.29%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTISS-----TQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MVPKSIGF++ FLSNRITS FFTISS     TQ NLNS       H+A+INASLQSQLLE
Sbjct: 1   MVPKSIGFLHSFLSNRITSSFFTISSILTYSTQPNLNS-------HEAIINASLQSQLLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSL SFKLM+L+GH PSS SFNNVL LLAKSG+L +TW FFTE+LGRT+FD  SFGITIK
Sbjct: 61  QSLHSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWCFFTEFLGRTRFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPN  IYTILI+ACC+NGDI+QAKV+FS+M+DLG  A
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGFVA 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           NQY YT MINGFFKKGYKKDGFELYEKMKLVGVLP+LYTYN+LI EYCRDGKLS+AFK+F
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELYEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DE+S R V+CNVVTY ILIGGLCRK Q+SKAE L ERMK+ HINPTTRT+N+LMDG CN 
Sbjct: 241 DEMSTRGVSCNVVTYTILIGGLCRKRQMSKAERLFERMKQVHINPTTRTYNLLMDGFCNI 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+L+KAL Y +K+KLIGL+PT V+YNILI+GF K GNS+VVSELVREMEDRGISPSKVTY
Sbjct: 301 GKLEKALGYFDKLKLIGLAPTSVSYNILIAGFSKAGNSAVVSELVREMEDRGISPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC+KGNMVEASKLYKSMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVEASKLYKSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           M++ PNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ASY STI+VLC +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLASYSSTIEVLCNEGKSTE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 499
           AKRLLKEM EAGL P ESL  K+G
Sbjct: 481 AKRLLKEMIEAGLNPSESLYCKLG 497

[Close]

BLAST of Chy1G001990 vs. NCBI nr
Match: KAG6571877.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 769 bits (1985), Expect = 1.81e-276
Identity = 381/504 (75.60%), Postives = 438/504 (86.90%), Query Frame = 0


Query: 1   MVPKSIGFVYPFLSNRITSYFFTISS-----TQRNLNSESVCGRPHDAVINASLQSQLLE 60
           MVPKSI FV+ FLSNRITS F TISS     TQ NLNS       H+A+ +ASLQSQ LE
Sbjct: 1   MVPKSIAFVHSFLSNRITSSFLTISSILTYSTQPNLNS-------HEAITSASLQSQQLE 60

Query: 61  QSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIK 120
           QSL+SFKLM+L+GH PSS SFNNVL LLAKSG+L +TWWFFTE+LGRT FD  SFGITIK
Sbjct: 61  QSLNSFKLMILQGHCPSSISFNNVLGLLAKSGDLHKTWWFFTEFLGRTHFDEYSFGITIK 120

Query: 121 AFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 180
           AFC+NGNVSKGFELLAQME +G+SPN  IYTILI+ACC+NGDI+QAKV+FS+M+DLGL  
Sbjct: 121 AFCKNGNVSKGFELLAQMERIGLSPNVVIYTILIDACCKNGDIEQAKVLFSKMNDLGLVV 180

Query: 181 NQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLF 240
           NQY YT MINGFFKKGYKKDGFEL+EKMKLVGVLP+LYTYN+LI EYCRDGKLS+AFK+F
Sbjct: 181 NQYTYTAMINGFFKKGYKKDGFELFEKMKLVGVLPSLYTYNTLINEYCRDGKLSIAFKVF 240

Query: 241 DEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNA 300
           DE+S   V+CNVVTY ILIGGLCRK Q+SKAE L ERMK+  INPTTRT+N+LMDG CN 
Sbjct: 241 DEMSTSGVSCNVVTYTILIGGLCRKRQLSKAERLFERMKQVRINPTTRTYNLLMDGFCNI 300

Query: 301 GQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTY 360
           G+L+KAL Y +++KLIGL+PT V+YNILI+GF K GNSSVVSELVREMEDRG+SPSKVTY
Sbjct: 301 GKLEKALGYFDELKLIGLAPTSVSYNILIAGFSKAGNSSVVSELVREMEDRGVSPSKVTY 360

Query: 361 TILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVE 420
           TILM+AFVRSDD+EKA ++FHLMK++G VPDQHTYGVL+HGLC+KGNMV+ASKLY SMVE
Sbjct: 361 TILMDAFVRSDDVEKASQLFHLMKKVGSVPDQHTYGVLMHGLCMKGNMVKASKLYNSMVE 420

Query: 421 MHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIE 480
           M++ PNDVIYN MINGYCKECNSYKALKFL+EMV  G+TP++ SY STI+VL  +GKS E
Sbjct: 421 MNVEPNDVIYNIMINGYCKECNSYKALKFLQEMVNKGLTPSLTSYKSTIEVLYNEGKSTE 480

Query: 481 AKRLLKEMTEAGLKPPESLCSKVG 499
           AKRLLKEM EAGL P ESLC K+G
Sbjct: 481 AKRLLKEMIEAGLNPSESLCCKLG 497

[Close]

BLAST of Chy1G001990 vs. TAIR 10
Match: AT4G11690.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 494.6 bits (1272), Expect = 9.5e-140
Identity = 247/489 (50.51%), Postives = 338/489 (69.12%), Query Frame = 0


Query: 13  LSNRITSYFFTISSTQRNLNSESVCG---RPHDAVINASLQSQLLEQSLDSFKLMVLKGH 72
           +S +I S FFT SS    L          R ++ +IN+ +QSQ L  S+  F  MV  G 
Sbjct: 66  ISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGF 125

Query: 73  YPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVSSFGITIKAFCENGNVSKGFEL 132
            P S  FN +L  +  S + ++ W FF E   +   DV SFGI IK  CE G + K F+L
Sbjct: 126 VPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185

Query: 133 LAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFK 192
           L ++   G SPN  IYT LI+ CC+ G+I++AK +F  M  LGL AN+  YT++ING FK
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245

Query: 193 KGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLFDEISKREVTCNVVT 252
            G KK GFE+YEKM+  GV PNLYTYN ++ + C+DG+   AF++FDE+ +R V+CN+VT
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVT 305

Query: 253 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNAGQLDKALSYLEKMK 312
           YN LIGGLCR+ ++++A  ++++MK   INP   T+N L+DG C  G+L KALS    +K
Sbjct: 306 YNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365

Query: 313 LIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTYTILMNAFVRSDDIE 372
             GLSP+LVTYNIL+SGF + G++S  +++V+EME+RGI PSKVTYTIL++ F RSD++E
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425

Query: 373 KAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLHPNDVIYNTMI 432
           KA ++   M+ +GLVPD HTY VLIHG CIKG M EAS+L+KSMVE +  PN+VIYNTMI
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485

Query: 433 NGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTEAGLK 492
            GYCKE +SY+ALK L+EM +  + PNVASY   I+VLCK+ KS EA+RL+++M ++G+ 
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545

Query: 493 PPESLCSKV 499
           P  S+ S +
Sbjct: 546 PSTSILSLI 554

[Close]

BLAST of Chy1G001990 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-65
Identity = 145/444 (32.66%), Postives = 233/444 (52.48%), Query Frame = 0


Query: 42  DAVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKS-GNLDRTWWFFTEYL 101
           D V+ +  +  L++++L    L    G  P   S+N VLD   +S  N+      F E L
Sbjct: 138 DLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML 197

Query: 102 -GRTQFDVSSFGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDID 161
             +   +V ++ I I+ FC  GN+     L  +MET G  PN   Y  LI+  C+   ID
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257

Query: 162 QAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLI 221
               +   M   GL  N   Y ++ING  ++G  K+   +  +M   G   +  TYN+LI
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317

Query: 222 TEYCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHIN 281
             YC++G    A  +  E+ +  +T +V+TY  LI  +C+ G +++A   L++M+   + 
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377

Query: 282 PTTRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSEL 341
           P  RT+  L+DG    G +++A   L +M   G SP++VTYN LI+G    G       +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437

Query: 342 VREMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 401
           + +M+++G+SP  V+Y+ +++ F RS D+++A  +   M   G+ PD  TY  LI G C 
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497

Query: 402 KGNMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 461
           +    EA  LY+ M+ + L P++  Y  +IN YC E +  KAL+   EMV+ GV P+V +
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557

Query: 462 YISTIQVLCKDGKSIEAKRLLKEM 484
           Y   I  L K  ++ EAKRLL ++
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKL 581

[Close]

BLAST of Chy1G001990 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 236.5 bits (602), Expect = 4.6e-62
Identity = 124/446 (27.80%), Postives = 231/446 (51.79%), Query Frame = 0


Query: 43  AVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGR 102
           +++N    S+ + +++     M + G+ P++ +FN ++  L                + +
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215

Query: 103 -TQFDVSSFGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQA 162
             Q D+ ++G+ +   C+ G+    F LL +ME   + P   IY  +I+  C+   +D A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275

Query: 163 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITE 222
             +F  M+  G+  N   Y+ +I+     G   D   L   M    + P+++T+++LI  
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335

Query: 223 YCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPT 282
           + ++GKL  A KL+DE+ KR +  ++VTY+ LI G C   ++ +A+ + E M   H  P 
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395

Query: 283 TRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVR 342
             T+N L+ G C   ++++ +    +M   GL    VTYNILI G F+ G+  +  E+ +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455

Query: 343 EMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKG 402
           EM   G+ P+ +TY  L++   ++  +EKA  +F  ++R  + P  +TY ++I G+C  G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515

Query: 403 NMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYI 462
            + +   L+ ++    + P+ V YNTMI+G+C++ +  +A    +EM ++G  PN   Y 
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575

Query: 463 STIQVLCKDGKSIEAKRLLKEMTEAG 488
           + I+   +DG    +  L+KEM   G
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCG 601

[Close]

BLAST of Chy1G001990 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 235.7 bits (600), Expect = 7.9e-62
Identity = 128/428 (29.91%), Postives = 218/428 (50.93%), Query Frame = 0


Query: 68  GHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQF--DVSSFGITIKAFCENGNVSK 127
           G  P   ++N ++    K+G ++         L R     DV ++   +++ C++G + +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNA----LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 226

Query: 128 GFELLAQMETMGVSPNDFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMIN 187
             E+L +M      P+   YTILIEA CR+  +  A  +   M D G   +   Y +++N
Sbjct: 227 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 286

Query: 188 GFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKLFDEISKREVTC 247
           G  K+G   +  +    M   G  PN+ T+N ++   C  G+   A KL  ++ ++  + 
Sbjct: 287 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 346

Query: 248 NVVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGSCNAGQLDKALSYL 307
           +VVT+NILI  LCRKG + +A  +LE+M +    P + ++N L+ G C   ++D+A+ YL
Sbjct: 347 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 406

Query: 308 EKMKLIGLSPTLVTYNILISGFFKIGNSSVVSELVREMEDRGISPSKVTYTILMNAFVRS 367
           E+M   G  P +VTYN +++   K G      E++ ++  +G SP  +TY  +++   ++
Sbjct: 407 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 466

Query: 368 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLHPNDVIY 427
               KA ++   M+   L PD  TY  L+ GL  +G + EA K +     M + PN V +
Sbjct: 467 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 526

Query: 428 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEMTE 487
           N+++ G CK   + +A+ FL  M+  G  PN  SY   I+ L  +G + EA  LL E+  
Sbjct: 527 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 586

Query: 488 AGLKPPES 494
            GL    S
Sbjct: 587 KGLMKKSS 590

[Close]

BLAST of Chy1G001990 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 235.0 bits (598), Expect = 1.4e-61
Identity = 128/450 (28.44%), Postives = 231/450 (51.33%), Query Frame = 0


Query: 41  HDAVINASLQSQLLEQSLDSFKLMVLKGHYPSSFSFNNVLDLLAKSGNLDRTWWFFTEYL 100
           ++ VI+   Q   ++++     LM LKG+ P   S++ V++   + G LD+ W    E +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI-EVM 308

Query: 101 GRTQFDVSS--FGITIKAFCENGNVSKGFELLAQMETMGVSPNDFIYTILIEACCRNGDI 160
            R     +S  +G  I   C    +++  E  ++M   G+ P+  +YT LI+  C+ GDI
Sbjct: 309 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 368

Query: 161 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYEKMKLVGVLPNLYTYNSL 220
             A   F  M    +  +   YT +I+GF + G   +  +L+ +M   G+ P+  T+  L
Sbjct: 369 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 428

Query: 221 ITEYCRDGKLSLAFKLFDEISKREVTCNVVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 280
           I  YC+ G +  AF++ + + +   + NVVTY  LI GLC++G +  A  LL  M +  +
Sbjct: 429 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 488

Query: 281 NPTTRTFNMLMDGSCNAGQLDKALSYLEKMKLIGLSPTLVTYNILISGFFKIGNSSVVSE 340
            P   T+N +++G C +G +++A+  + + +  GL+   VTY  L+  + K G      E
Sbjct: 489 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 548

Query: 341 LVREMEDRGISPSKVTYTILMNAFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 400
           +++EM  +G+ P+ VT+ +LMN F     +E   ++ + M   G+ P+  T+  L+   C
Sbjct: 549 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 608

Query: 401 IKGNMVEASKLYKSMVEMHLHPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVA 460
           I+ N+  A+ +YK M    + P+   Y  ++ G+CK  N  +A    +EM   G + +V+
Sbjct: 609 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 668

Query: 461 SYISTIQVLCKDGKSIEAKRLLKEMTEAGL 489
           +Y   I+   K  K +EA+ +  +M   GL
Sbjct: 669 TYSVLIKGFLKRKKFLEAREVFDQMRREGL 697

The following BLAST results are available for this feature:

BLAST of Chy1G001990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T0D6	1.3e-138	50.51	Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	1.7e-64	32.66	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9SXD1	6.5e-61	27.80	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q3EDF8	1.1e-60	29.91	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	1.9e-60	28.44	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]

BLAST of Chy1G001990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6B4	3.1e-271	93.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C0B2	3.1e-271	93.45	pentatricopeptide repeat-containing protein At4g11690 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1I748	1.9e-225	77.58	pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GM09	1.6e-219	75.40	pentatricopeptide repeat-containing protein At4g11690 OS=Cucurbita moschata OX=3...	[more]
A0A6J1C8X2	8.2e-216	73.27	pentatricopeptide repeat-containing protein At4g11690 OS=Momordica charantia OX=...	[more]

BLAST of Chy1G001990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137069.1	0.0	95.79	pentatricopeptide repeat-containing protein At4g11690 [Cucumis sativus] >KGN4384...	[more]
XP_008455127.1	0.0	93.45	PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis melo] ...	[more]
XP_038887006.1	3.99e-298	82.34	pentatricopeptide repeat-containing protein At4g11690 [Benincasa hispida]	[more]
XP_022971940.1	2.55e-283	77.58	pentatricopeptide repeat-containing protein At4g11690 [Cucurbita maxima]	[more]
KAG6571877.1	1.81e-276	75.60	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Chy1G001990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11690.1	9.5e-140	50.51	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	1.2e-65	32.66	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62670.1	4.6e-62	27.80	rna processing factor 2	[more]
AT1G09900.1	7.9e-62	29.91	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.1	1.4e-61	28.44	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 248..281 e-value: 2.8E-9 score: 34.6 coord: 464..490 e-value: 0.0017 score: 16.4 coord: 318..351 e-value: 1.4E-7 score: 29.2 coord: 144..176 e-value: 2.4E-7 score: 28.5 coord: 423..457 e-value: 1.1E-10 score: 39.0 coord: 284..315 e-value: 5.6E-6 score: 24.2 coord: 213..246 e-value: 1.4E-6 score: 26.1 coord: 388..421 e-value: 6.9E-7 score: 27.1 coord: 114..141 e-value: 1.6E-5 score: 22.8 coord: 178..211 e-value: 1.1E-5 score: 23.3 coord: 353..386 e-value: 8.1E-9 score: 33.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 106..154 e-value: 2.4E-10 score: 40.5 coord: 315..363 e-value: 4.1E-14 score: 52.5 coord: 420..469 e-value: 7.2E-15 score: 54.9 coord: 210..259 e-value: 7.4E-18 score: 64.5
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 382..414 e-value: 4.9E-8 score: 32.6 coord: 278..309 e-value: 6.3E-8 score: 32.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 179..207 e-value: 7.0E-5 score: 22.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..175 score: 11.32308
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 176..210 score: 10.698286
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 281..315 score: 11.39981
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 211..245 score: 11.268274
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 351..385 score: 12.013642
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 421..455 score: 12.726127
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 386..420 score: 11.125777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 316..350 score: 11.41077
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 456..490 score: 11.114816
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 106..140 score: 11.049048
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 246..280 score: 13.120733
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 275..343 e-value: 1.0E-19 score: 72.8 coord: 206..274 e-value: 2.2E-21 score: 78.3 coord: 150..205 e-value: 9.1E-14 score: 53.4 coord: 417..489 e-value: 5.5E-18 score: 67.2 coord: 344..416 e-value: 9.5E-23 score: 82.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 22..149 e-value: 1.3E-21 score: 78.7
None	No IPR available	PANTHER	PTHR47942:SF34	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 7..496
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 7..496
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 152..323
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 360..489

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G001990.1	Chy1G001990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032544	plastid translation
biological_process	GO:0043489	RNA stabilization
cellular_component	GO:0009536	plastid
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding