Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTCCCTACTCTCCCCGGTGGCTCGCACCGGTCCCTTCCCGGCCACCGCCGCAGTTTATTCATCGGATTTACACCTTAGCCGCTTCCATCGCCGGCCCATCTCTGTCCGCCACTCCTTCAATTCCCTCCCTCCATTTAGTGCCATTCCATCTTCTTCTTCTTCGTTGTTGCTTTTGAAGACTTTTGGTACTCTGAAGCATAGAAGAGGACAGCTTTGCTCGGAAACACGCGCTTCTTCTAGTCCCATTTCCCCGACTGTTTCCCCAAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTTCTCTTTCTTCTAATGCTTTTGGGTTCAACCCTTTTGATTCTGATGTTTAATTGACAAGGAAATGTAGTATTGAAAATTAGGCTGCCCTTGCTTTAATTTCTTTGGGTGAAATGCTTAGTCATAGATGAACCTTTGTGTTTACTACTTTCGTGATCTTTTTTTTTTCTATTTGGATTAACTATGGATGGCAATTCCTACCGAAGGTTTTAGCTGTTTAACTATTTAACTCTTCTCTTGCGTGGGTCTAACCCTCCCACTCTTCCTTGTTCTTCTTGCTGTGAAGCTTTGAATTTCCAAGGTCAGACATTTTGCCTGGCAGTTCTCCCATGGGAGCAGTAACACTATAGATTGTATTAAATAATCTTCTTCTGATATGGTCGGTCCTTAGTGGTGTAGAGTATGTAAGGGGGTTGTGGAGATTCTGGACCTTGTTTTATGGGATTGTTGGTATATATGGTACAGTGACTTGGGATAGATTCCTGCAGTCTTTCGGTATTCAGATGATCTGCAAAAGGTTGTGTAGGGCTATGATGGAAGAGGTGTTATTCCACCCCCTTTTTGTGATAGAGGGGCAAGTTTATGGTAGACTGTTTCTTTCCGTCCTTATGGAAAATCTGGCTTGAGAGAAATATGAGTCTTTACTTTAATGATAAGGAAAGTCCTTGGGAGGGGTTTGGGCTTTGGTAAGGTCAATGTTTTAAAAAGCTATTGAGGCAAGGCTCTAAGTTTTAGCCTCGGGACTTATGCCTTTGCGAAAATGCACTGAGGCTTAAAATCTCTATGCCTCGCCTATTGATTAGAAAAATAATAGTGATTTGCACAATTCTTCAGAAATATCAAGGTTTGAGCTATGGCAGTTTAAACTAGGACTATTTTTTACTCTTTTGAACTTAAGAATGCTGAAAACAAATGCTTTTTCTTTTTTTCAATTTTTAGCGTTTTGATGGGCTTTGAGGATGGTTTTTAAACTATCATTACTTTAGAACTTATGACCTACTCAATTAGATGGAGGTTTGTTGCCCACATTGAATAAGACTGAATATTTGATAGAACAAAGGCTAGTGAATATGAGCCTCACATGTGGTTGACAAAGTTGATGGGATTGTGGTTTCTAAATTCAATACTGGCATGAAATAGAGAATAAAGCAGTCGGTGCCCCTTTATATTTACCTTTAGAGGTAATTTTAACATCTCTCTCTATCGTGAGGAGGATAATTTTTTTTAGACAAAAGAGGATATATTAAAGCAGTGAAGGAGCATGTAAAAGGAAACTTCTAGCCCAAAACTGAGTCCAGCGGTCTATTATGGAAGGCCAGCTCTCTCCCTCACACTGTATTATGGAGTTGCATAAATGATCGCTTAAAGGGCATTTGTATTTGGTAGTAACCAAGGGTCCCCCTTCTCGTTTATTTCCGCCAAAACAGTACTGTTGTAGTTTGATTGGGGGACATTCAGGTGTGTTAATGAAAATTTCCAAATGTACTATAGTCTGCGGCCACAACCTATCGGACTGTTGGCATGGGATAGTTTTATTATGGACTTCATCAAGAAATCCTGAGTATGATGTAATGTACTTAGTATGGAAATATGCTCAATTTGATGGTCTCAATCATCCTGACACTGTGTATGAAATTGATAGGAAAGTATCATGCTCTGTGCAGACCTTACAAATACCACACATGGGCGAGGAGACCTTACGAATACCACAACATGGGCCAGATGGCTGTCATAGGATCAATATCAGTTCAATACCTGCCTTGTACCATCTCATCTTGAAGGCTAGCTCTTATCAACTTCTGTAAGCTGTGGAAAATGGTCTGGGCATTTAACATATTGCAGGGCAAATTAGCATTAGTCCAAGTAGTGAAGAGGTGTGTGAGGAACCAAGGTAGTTTGGGATGCCTTTGTCCCACATTGGTTAGAATAGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTTTCACCCCAAAAGTCAACTTTTGGGGTGTGGTTCTCCAAGGTGCTGAAGTACCGATACCCTGTTTCAAAGTGAAACCAATGAAGTCTTCTGATCGGGTGTGGTTGAGTGAAGTACCGTCAAAGTAGCTACTGGGACGTCGGTTTTCCAAGGATGGGTTATTGTTAGAAACCAAGGTAGTATGAGATGCCTCTGTCCTACATTGGTTAGAATGGGAAGACCAATGTGGTACTTAAGTGGTTTGGCTCTCCCACTCCAATAGCTGGCTTTTGGGGTGTGGTTCTCCAAGATGCTTAAGTACCTAACAGAGTGTTATATATATATATATTTTTAAAAAAATTTATTTATATATTTTTAAAAAAATTTATTTATTTATTTTTAACTAAATGATTTCATTAATAAATGAAATGGGGAGAAAAATCTCAAGAACGCCAAGAGATGTATTGCAATAAAGCTTTTCCATTGGAAACTATAGACTGGAAATTATAGTAAGCCTATAATCTTAAAAAATATGTATACTATTAAGATCAAAGTAGACTAGAATAGACTAAATACTACCACCAAATTATGAACTTCAAAACTACCACGTTCTTTACAACTCTTACAAACAGAAACTATCTGATCATGTCATCTAGGCTAATATTGTATCTCCCATGTGGTTAGTTGGTTCACCTCGCTTCTGACTGTTATTTGCCAATACTGTTAGTTGAGTTGGTTTGTGGTTAGTTAAGTAGTTCACTGTGTAATTTTTGGTTACTTGTCAGCTTATTTAGTTAAGTTCTATACTTTTGTACTTACTACTTTTGAATTATGATTTCTCTCGAGAGGTTCCTAGACTACTGCATCTCTATCATTATTACTAATCATATAATGAACTAAGTCACTTTGATGGTCTAGGTGGCAAAGAGATTAGAGAAGACATCGAAGTATTTCAAGAGGTTGGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCTGTTATTCTCTCATTCTCTGTTGTTATCACTGGGAAAATTACATCACCGGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTTTGGTCATTTGGATACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGTATTATAATTGTTGTGTTTCTATCTGCTAATAAACATGATTTTTCTTTGCTGTAAAAGTTATGGCATTTATCTATTTGAAAATTGAAACAAGATAACCTTTACATTACAACTTGAATTTTTTCGTCTTTACTCTAGCAAAGATTTCAAAAGGCTTCATCAATTTTCTTACCATTCTTCTATCTATACATAAACATGACGAACTTTAGGCTGACATTAAATTGGCACCTTGCCGAGAGATTGGTATCTATATGGGCAGGGCACTTCATCTCCAGCGGATTTCCTTTATGTTACAAATCCTTTTTTTTTTTACTTGAGAAACGTAACTTGTTTATACATCCAGCTTTTAGCATCTTTCTTCTCCTCATTTATTTTTGCACTATTTCTAATTGGAGTACCTATTTTGATATAATTTTATCTGCTAAATATGAGCACGTGCAAAATAAAGTAGCAACTTGACTGAACTCAAGCTTCCTCTTCTTATTTATTGATCCCAATTTCAGGCTCCTCCTCGAGCCGATGTTGTGAATAGCCTCAGAAATGGAATAGTAGTAAACCTGTTAGGCATGGGTGCTGCCATTCTGGGGATGCAAGCAACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGCTGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCCTAGTACAGGTATGTATTTTTCCCTCAATTGTTATTTTGCTGGAGAACACAAAATTTTCAGATGACGAACGCTGTGAAACTTGAGGTGAAAATTGGTTGAACTGCCCTGCTTAAAAAATGTTTGGGAATAATTTTGAAATTGTAAAAGTCACTTTCATCATGTTTCTAATCACTCTTAAACACGTCTTTAATCAATCAAAATTTATTTAGCATTTAATGTTACTCTTTTAAATGTGATTTTTCTCTTATTTAAATACTCTGCTGATTATTCAACTCAAGTTATTTGTTTATATTAAAATATTACCGTGTCTTTAAAAGTTTAGTCTATGTTTTATATTAGGGTTCTAGCCTTGTTTGGGGAAGTATGCAGTTTTTATTTTGTTTCAAAGTCTCATTTTCGTTTAAAAGAAACTAATTTTTATATCATCAAAATTGATTTTGAATGATTTAAAAAAATGTTTTAGAGTGATTTTGAAAATGACAAGCGATTTTAACCATTTTAGAATCACAGCAAACATGCTATCAATGTCATCTCAATCGACAATTCATTGCTAACTTTTAGCAATGGTTTATAGGGGTTTTAACAATGGCAACAGTGAATGTTATGTATGCTTTATTGATTGCTAGAACATATCATTCTACTTCTCCTTTATAAAGGAATGTGTTCTCTTGAAAAGAACCAGAAGAGCCATGTTGAAAAGAACCAAAAGAGCCTTGTGCAGAAAAGAACCAATGAATCAAACTTGTACAAGGCATAACAAAATGTTCATTGATTCTTGATGCCATCGAACGACTTTTTCTAACTTTCATATTTGCAGGCTTCTGCGAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCCTTAGAGCTACTCCGCTCAGTGACATTACCTGCTACAGATAGTATTCCTATACCTCGAATGGCATAA
mRNA sequence
ATGCAGTCCCTACTCTCCCCGGTGGCTCGCACCGGTCCCTTCCCGGCCACCGCCGCAGTTTATTCATCGGATTTACACCTTAGCCGCTTCCATCGCCGGCCCATCTCTGTCCGCCACTCCTTCAATTCCCTCCCTCCATTTAGTGCCATTCCATCTTCTTCTTCTTCGTTGTTGCTTTTGAAGACTTTTGGTACTCTGAAGCATAGAAGAGGACAGCTTTGCTCGGAAACACGCGCTTCTTCTAGTCCCATTTCCCCGACTGTTTCCCCAAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAGAAGACATCGAAGTATTTCAAGAGGTTGGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCTGTTATTCTCTCATTCTCTGTTGTTATCACTGGGAAAATTACATCACCGGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTTTGGTCATTTGGATACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCTCGAGCCGATGTTGTGAATAGCCTCAGAAATGGAATAGTAGTAAACCTGTTAGGCATGGGTGCTGCCATTCTGGGGATGCAAGCAACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGCTGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCCTAGTACAGGCTTCTGCGAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCCTTAGAGCTACTCCGCTCAGTGACATTACCTGCTACAGATAGTATTCCTATACCTCGAATGGCATAA
Coding sequence (CDS)
ATGCAGTCCCTACTCTCCCCGGTGGCTCGCACCGGTCCCTTCCCGGCCACCGCCGCAGTTTATTCATCGGATTTACACCTTAGCCGCTTCCATCGCCGGCCCATCTCTGTCCGCCACTCCTTCAATTCCCTCCCTCCATTTAGTGCCATTCCATCTTCTTCTTCTTCGTTGTTGCTTTTGAAGACTTTTGGTACTCTGAAGCATAGAAGAGGACAGCTTTGCTCGGAAACACGCGCTTCTTCTAGTCCCATTTCCCCGACTGTTTCCCCAAATGATGAGGCTGAAAAGGCAAAACTGGCTCAGGTGGCAAAGAGATTAGAGAAGACATCGAAGTATTTCAAGAGGTTGGGTAGTCTCGGATTTTGGGGACAGTTGGTGTGCACAATTGTCGCTGCTGTTATTCTCTCATTCTCTGTTGTTATCACTGGGAAAATTACATCACCGGCCACTTTTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTTTGGTCATTTGGATACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCTCGAGCCGATGTTGTGAATAGCCTCAGAAATGGAATAGTAGTAAACCTGTTAGGCATGGGTGCTGCCATTCTGGGGATGCAAGCAACGGTGGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGCTGCCTCCCCTGGGAATAGCCCTGTTCTTGCTTTGGATGTATTCCTAGTACAGGCTTCTGCGAACACTATTCTCTCTCATTTCCTGGGGCTCGTTTTCTCCTTAGAGCTACTCCGCTCAGTGACATTACCTGCTACAGATAGTATTCCTATACCTCGAATGGCATAA
Protein sequence
MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA*
Homology
BLAST of Chy1G001020 vs. ExPASy Swiss-Prot
Match:
Q9SHU7 (Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1)
HSP 1 Score: 306.6 bits (784), Expect = 3.0e-82
Identity = 184/299 (61.54%), Postives = 220/299 (73.58%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRH--SFNSL---PPFSAIPSSSS 60
MQSLL P A + +AV F+ + +S R FN L P SS
Sbjct: 1 MQSLLLPPASSS---GVSAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQ 60
Query: 61 SLLLLKTFG-TLKHRRGQLCSETRASSSPISPTVSPND-EAEKAKLAQVAKRLEKTSKYF 120
S L +G + + T A S P SP+ P D E +KAKLAQVAKRLEKTS+YF
Sbjct: 61 SPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQVAKRLEKTSRYF 120
Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
KRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF+SVFWSFGYIR
Sbjct: 121 KRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVFWSFGYIR 180
Query: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
LS++L+RT+ P+KAPPRADVV LR+GI+VN+LGMG+A+LGMQATVG LVAKALT+SA
Sbjct: 181 LSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAKALTTSAN 240
Query: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 293
P+YQ S G SPVLALDVFLVQASANT+LSHFLGLV SLELLRSVT+P ++S+ +P++A
Sbjct: 241 PFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPKVA 296
BLAST of Chy1G001020 vs. ExPASy TrEMBL
Match:
A0A0A0K4J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1)
HSP 1 Score: 544.3 bits (1401), Expect = 3.2e-151
Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSSLLLL 60
MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSSLLLL
Sbjct: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSSLLLL 60
Query: 61 KTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLG 120
KTFGTLKH RGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLG
Sbjct: 61 KTFGTLKHSRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLG 120
Query: 121 FWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQR 180
FWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQR
Sbjct: 121 FWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQR 180
Query: 181 TANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAAS 240
TANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAAS
Sbjct: 181 TANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAAS 240
Query: 241 PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 293
PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA
Sbjct: 241 PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292
BLAST of Chy1G001020 vs. ExPASy TrEMBL
Match:
A0A5A7SP50 (Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 PE=4 SV=1)
HSP 1 Score: 517.7 bits (1332), Expect = 3.2e-143
Identity = 281/300 (93.67%), Postives = 284/300 (94.67%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAI--------PS 60
MQSLLSPVARTGPFP TAAVYSSD HLSR HRRP SVRHSFNSLP FSAI S
Sbjct: 1 MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSFNSLPQFSAISSSSSSSSSS 60
Query: 61 SSSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKY 120
SSSSLLLLKTFGTL+HRRGQLCSETRASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+Y
Sbjct: 61 SSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRY 120
Query: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180
FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSFGYI
Sbjct: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVFWSFGYI 180
Query: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA
Sbjct: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
Query: 241 IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 293
IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPR+A
Sbjct: 241 IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 300
BLAST of Chy1G001020 vs. ExPASy TrEMBL
Match:
A0A1S3C0L3 (protein TIC 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495279 PE=4 SV=1)
HSP 1 Score: 517.7 bits (1332), Expect = 3.2e-143
Identity = 281/300 (93.67%), Postives = 284/300 (94.67%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAI--------PS 60
MQSLLSPVARTGPFP TAAVYSSD HLSR HRRP SVRHSFNSLP FSAI S
Sbjct: 1 MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSFNSLPQFSAISSSSSSSSSS 60
Query: 61 SSSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKY 120
SSSSLLLLKTFGTL+HRRGQLCSETRASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+Y
Sbjct: 61 SSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRY 120
Query: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180
FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSFGYI
Sbjct: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVFWSFGYI 180
Query: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA
Sbjct: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
Query: 241 IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 293
IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPR+A
Sbjct: 241 IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 300
BLAST of Chy1G001020 vs. ExPASy TrEMBL
Match:
A0A6J1GMQ4 (protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4 SV=1)
HSP 1 Score: 479.6 bits (1233), Expect = 9.6e-132
Identity = 264/299 (88.29%), Postives = 277/299 (92.64%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSF------NSLPPFSAI-PSS 60
MQSLLSPV R GPFP AAVY+S+LHLS F+RRP SVR++ NSLP FSAI P S
Sbjct: 1 MQSLLSPVGRGGPFP-VAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPS 60
Query: 61 SSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
S SLLLLK FGTL+HRRGQ CS+T ASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61 SFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120
Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
KRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
Query: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
LSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
Query: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 293
PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAT+SIPIPR+A
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298
BLAST of Chy1G001020 vs. ExPASy TrEMBL
Match:
A0A6J1I5V5 (protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 5.3e-130
Identity = 259/299 (86.62%), Postives = 275/299 (91.97%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHS------FNSLPPFSAI-PSS 60
MQSLLSPV R GPFP +AAVY+S+LHLS F+RRP SVR++ NSLP FSAI P S
Sbjct: 1 MQSLLSPVGRGGPFP-SAAVYTSELHLSCFNRRPFSVRYASNLKSPHNSLPSFSAIRPPS 60
Query: 61 SSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
S SLLLLK FG L+HRRGQ CS+TRASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61 SFSLLLLKIFGALEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120
Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
KRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
Query: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
LSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
Query: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 293
PYYQ PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVT+PA +SIPIP++A
Sbjct: 241 PYYQGVPPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTMPAAESIPIPKIA 298
BLAST of Chy1G001020 vs. NCBI nr
Match:
XP_004136957.1 (protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein Csa_017075 [Cucumis sativus])
HSP 1 Score: 546 bits (1407), Expect = 2.66e-195
Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSSLLLL 60
MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSSLLLL
Sbjct: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSSLLLL 60
Query: 61 KTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLG 120
KTFGTLKH RGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLG
Sbjct: 61 KTFGTLKHSRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYFKRLGSLG 120
Query: 121 FWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQR 180
FWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQR
Sbjct: 121 FWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQR 180
Query: 181 TANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAAS 240
TANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAAS
Sbjct: 181 TANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQAAS 240
Query: 241 PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292
PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA
Sbjct: 241 PGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292
BLAST of Chy1G001020 vs. NCBI nr
Match:
XP_008454999.1 (PREDICTED: protein TIC 21, chloroplastic [Cucumis melo] >KAA0031341.1 protein TIC 21 [Cucumis melo var. makuwa] >TYK06794.1 protein TIC 21 [Cucumis melo var. makuwa])
HSP 1 Score: 520 bits (1338), Expect = 1.17e-184
Identity = 281/300 (93.67%), Postives = 284/300 (94.67%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFNSLPPFSAIPSSSSS---- 60
MQSLLSPVARTGPFP TAAVYSSD HLSR HRRP SVRHSFNSLP FSAI SSSSS
Sbjct: 1 MQSLLSPVARTGPFPPTAAVYSSDFHLSRLHRRPFSVRHSFNSLPQFSAISSSSSSSSSS 60
Query: 61 ----LLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKY 120
LLLLKTFGTL+HRRGQLCSETRASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+Y
Sbjct: 61 SSSSLLLLKTFGTLEHRRGQLCSETRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRY 120
Query: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYI 180
FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKI SPATFYATAGGIVAAFISVFWSFGYI
Sbjct: 121 FKRLGSLGFWGQLVCTIVAAVILSFSVVITGKIASPATFYATAGGIVAAFISVFWSFGYI 180
Query: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA
Sbjct: 181 RLSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSA 240
Query: 241 IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292
IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPR+A
Sbjct: 241 IPYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 300
BLAST of Chy1G001020 vs. NCBI nr
Match:
XP_038888764.1 (protein TIC 21, chloroplastic [Benincasa hispida])
HSP 1 Score: 501 bits (1290), Expect = 2.32e-177
Identity = 274/299 (91.64%), Postives = 280/299 (93.65%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFN------SLPPFSAI-PSS 60
MQSLLSPVAR+GPFPA AAVYSSDLHLSRFHRRP SVRHS N SL F+A+ SS
Sbjct: 1 MQSLLSPVARSGPFPAAAAVYSSDLHLSRFHRRPFSVRHSSNLNSPPNSLSSFNAVRSSS 60
Query: 61 SSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
SSSLLLLKTFGTL+HRRGQ SET ASSSPISP V PNDEA+KAKLAQVAKRLEKTSKYF
Sbjct: 61 SSSLLLLKTFGTLEHRRGQFFSETHASSSPISPAVPPNDEADKAKLAQVAKRLEKTSKYF 120
Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
Query: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
Query: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292
PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPR+A
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRIA 299
BLAST of Chy1G001020 vs. NCBI nr
Match:
KAG6571949.1 (Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011639.1 Protein TIC 21, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 484 bits (1246), Expect = 1.12e-170
Identity = 264/299 (88.29%), Postives = 278/299 (92.98%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHS------FNSLPPFSAI-PSS 60
MQSLLSPV R GPFP+ AAVY+S+LHLS F+RRP SVR++ NSLP FSAI P S
Sbjct: 1 MQSLLSPVGRGGPFPS-AAVYTSELHLSCFNRRPFSVRYASNFKSPHNSLPSFSAIRPPS 60
Query: 61 SSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
S SLLL K FGTL+HRRGQ CS+TRASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61 SFSLLLFKNFGTLEHRRGQFCSDTRASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120
Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
+RLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 RRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
Query: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
LSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
Query: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292
PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAT+SIPIPRMA
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRMA 298
BLAST of Chy1G001020 vs. NCBI nr
Match:
XP_022952785.1 (protein TIC 21, chloroplastic [Cucurbita moschata])
HSP 1 Score: 481 bits (1239), Expect = 1.31e-169
Identity = 264/299 (88.29%), Postives = 277/299 (92.64%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRHSFN------SLPPFSAI-PSS 60
MQSLLSPV R GPFP AAVY+S+LHLS F+RRP SVR++ N SLP FSAI P S
Sbjct: 1 MQSLLSPVGRGGPFPV-AAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPS 60
Query: 61 SSSLLLLKTFGTLKHRRGQLCSETRASSSPISPTVSPNDEAEKAKLAQVAKRLEKTSKYF 120
S SLLLLK FGTL+HRRGQ CS+T ASSSPISPTV PNDEAEKAKLAQVAKRLEKTS+YF
Sbjct: 61 SFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQVAKRLEKTSRYF 120
Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
KRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVFWSFGYIR
Sbjct: 121 KRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
Query: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
LSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI
Sbjct: 181 LSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
Query: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 292
PYYQ ASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPAT+SIPIPR+A
Sbjct: 241 PYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA 298
BLAST of Chy1G001020 vs. TAIR 10
Match:
AT2G15290.1 (translocon at inner membrane of chloroplasts 21 )
HSP 1 Score: 306.6 bits (784), Expect = 2.1e-83
Identity = 184/299 (61.54%), Postives = 220/299 (73.58%), Query Frame = 0
Query: 1 MQSLLSPVARTGPFPATAAVYSSDLHLSRFHRRPISVRH--SFNSL---PPFSAIPSSSS 60
MQSLL P A + +AV F+ + +S R FN L P SS
Sbjct: 1 MQSLLLPPASSS---GVSAVALRPGFQHSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQ 60
Query: 61 SLLLLKTFG-TLKHRRGQLCSETRASSSPISPTVSPND-EAEKAKLAQVAKRLEKTSKYF 120
S L +G + + T A S P SP+ P D E +KAKLAQVAKRLEKTS+YF
Sbjct: 61 SPPSLSVYGFQIGGSKPSFTPSTVAFSYPTSPSSVPGDNEVDKAKLAQVAKRLEKTSRYF 120
Query: 121 KRLGSLGFWGQLVCTIVAAVILSFSVVITGKITSPATFYATAGGIVAAFISVFWSFGYIR 180
KRLGS+GFWGQLV T+VAAVILSFS+V+TGK TSPATFYATA GI AAF+SVFWSFGYIR
Sbjct: 121 KRLGSIGFWGQLVSTVVAAVILSFSIVVTGKPTSPATFYATASGIAAAFVSVFWSFGYIR 180
Query: 181 LSDKLQRTANQPSKAPPRADVVNSLRNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAI 240
LS++L+RT+ P+KAPPRADVV LR+GI+VN+LGMG+A+LGMQATVG LVAKALT+SA
Sbjct: 181 LSERLRRTSIDPAKAPPRADVVKGLRSGIMVNILGMGSALLGMQATVGFLVAKALTTSAN 240
Query: 241 PYYQAASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATDSIPIPRMA 293
P+YQ S G SPVLALDVFLVQASANT+LSHFLGLV SLELLRSVT+P ++S+ +P++A
Sbjct: 241 PFYQGVSQGYSPVLALDVFLVQASANTLLSHFLGLVCSLELLRSVTVPNSESVVVPKVA 296
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SHU7 | 3.0e-82 | 61.54 | Protein TIC 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC21 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K4J8 | 3.2e-151 | 99.66 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071680 PE=4 SV=1 | [more] |
A0A5A7SP50 | 3.2e-143 | 93.67 | Protein TIC 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00960 ... | [more] |
A0A1S3C0L3 | 3.2e-143 | 93.67 | protein TIC 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495279 PE=4 SV=1 | [more] |
A0A6J1GMQ4 | 9.6e-132 | 88.29 | protein TIC 21, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455377 PE=4... | [more] |
A0A6J1I5V5 | 5.3e-130 | 86.62 | protein TIC 21, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470964 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
XP_004136957.1 | 2.66e-195 | 99.66 | protein TIC 21, chloroplastic [Cucumis sativus] >KGN43879.1 hypothetical protein... | [more] |
XP_008454999.1 | 1.17e-184 | 93.67 | PREDICTED: protein TIC 21, chloroplastic [Cucumis melo] >KAA0031341.1 protein TI... | [more] |
XP_038888764.1 | 2.32e-177 | 91.64 | protein TIC 21, chloroplastic [Benincasa hispida] | [more] |
KAG6571949.1 | 1.12e-170 | 88.29 | Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >... | [more] |
XP_022952785.1 | 1.31e-169 | 88.29 | protein TIC 21, chloroplastic [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT2G15290.1 | 2.1e-83 | 61.54 | translocon at inner membrane of chloroplasts 21 | [more] |