Chy1G000910 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G000910
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Plant basic secretory protein (BSP) family protein
Location	chrH01: 601576 .. 602330 (-)
RNA-Seq Expression	Chy1G000910
Synteny	Chy1G000910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTAAAGCTCAGAGTCAATTCAAGTCCAACTCAGTTTCTGTACTATGGTAAGAAAATTAGGTTAAATTACAAGTTGCCTTTAACTTTTTCTACTTAGATATTAAAATTATACATAATTAATACAATCTTGAACTTCTTGGTTGATTTTAAGTCTAACAAGTGTGTGAAATTCAAAAATATTTAATGGATTTCTAAAAAAATAATTGAACTATAATATATAAATTTTAATTAAACCTCAGGCTCTCCCAATTTTTGATCCATACATTTTTAGAATATTGAATATGATCCAAAAGGATGCAATTGACCTATAATTAAAAGTCAAGTCATCTATTAAAGACAAAATTAAAAGTTCAATAATAATTATGGAAGACTTTTCAAAATTGAAATTTATTTGAACAAGTTTAGAATTTGTTAAATACCTTCAAGAATTTAACTAAGAAATTATGAGTCAGCAAATATCGAAAAATTATGTTTAAACAAAATCTACGTATGTAAAGTGAATAATAGTAAGTTCTTTTTAAACTTGTATACACAGATGAAAAGTTAGAGAATCGAATTTCTCACAAATATTAATGAAAAAATAATAAAAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTACTTTGTGGAGCTGCAGGGAAAGACAGTGGATGAGCTGTGGGCGGAGTACAAGGCGGCGTTTGGGAATCGTGATTGA

mRNA sequence

ATGGGTCTAAAGCTCAGAGTCAATTCAAGTCCAACTCAGTTTCTGTACTATGGTAAGAAAATTAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTACTTTGTGGAGCTGCAGGGAAAGACAGTGGATGAGCTGTGGGCGGAGTACAAGGCGGCGTTTGGGAATCGTGATTGA

Coding sequence (CDS)

ATGGGTCTAAAGCTCAGAGTCAATTCAAGTCCAACTCAGTTTCTGTACTATGGTAAGAAAATTAGATTTATGGACTATTTGGAGAAGAGGACGAGTGGGTTCGTGTCAAAGCTGAATCAAAAGCTCAGAGACGGCTTCTCTCTAGATTACTTTGTGGAGCTGCAGGGAAAGACAGTGGATGAGCTGTGGGCGGAGTACAAGGCGGCGTTTGGGAATCGTGATTGA

Protein sequence

MGLKLRVNSSPTQFLYYGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD*

Homology

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BLAST of Chy1G000910 vs. ExPASy TrEMBL
Match: A0A0A0K6G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072790 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-23
Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 75
           Y K  RFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD
Sbjct: 49  YDKTARFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 106

[Close]

BLAST of Chy1G000910 vs. ExPASy TrEMBL
Match: A0A0A0K7U8 (NtPRp27-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G072780 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.2e-15
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNR 74
           Y K  RFMDYLE R SGFVS LN+ LR G+S +YFV+LQGKTV ELWAEYKAAFGNR
Sbjct: 203 YDKTARFMDYLEGRRSGFVSALNRMLRVGYSPEYFVQLQGKTVAELWAEYKAAFGNR 259

[Close]

BLAST of Chy1G000910 vs. ExPASy TrEMBL
Match: A0A6J1I9S7 (uncharacterized protein LOC111470953 OS=Cucurbita maxima OX=3661 GN=LOC111470953 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-14
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 73
           Y K  RF+DYLE R SGFVS+LN+ LR+G+S DYFV+LQGK V +LWAEYKAAFGN
Sbjct: 170 YDKTARFLDYLETRRSGFVSELNRMLRNGYSPDYFVQLQGKPVAQLWAEYKAAFGN 225

[Close]

BLAST of Chy1G000910 vs. ExPASy TrEMBL
Match: A0A411HRA5 (PRp27-like protein OS=Cucurbita pepo subsp. pepo OX=3664 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-14
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 73
           Y K  RF+DYLE R SGFVS+LN+ LR+G+S DYFV+LQGK V +LWAEYKAAFGN
Sbjct: 170 YDKTARFLDYLETRRSGFVSELNRMLRNGYSPDYFVQLQGKPVAQLWAEYKAAFGN 225

[Close]

BLAST of Chy1G000910 vs. ExPASy TrEMBL
Match: A0A6J1GLC5 (uncharacterized protein LOC111455379 OS=Cucurbita moschata OX=3662 GN=LOC111455379 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-14
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 73
           Y K  RF+DYLE R SGFVS+LN+ LR+G+S DYFV+LQGK V +LWAEYKAAFGN
Sbjct: 170 YDKTARFLDYLETRRSGFVSELNRMLRNGYSPDYFVQLQGKPVAQLWAEYKAAFGN 225

[Close]

BLAST of Chy1G000910 vs. NCBI nr
Match: XP_004137102.2 (uncharacterized protein LOC101216547 [Cucumis sativus])

HSP 1 Score: 115 bits (288), Expect = 2.17e-31
Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 74
           Y K  RFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD
Sbjct: 49  YDKTARFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNRD 106

[Close]

BLAST of Chy1G000910 vs. NCBI nr
Match: XP_004137101.1 (uncharacterized protein LOC101216297 [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 1.31e-19
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNR 73
           Y K  RFMDYLE R SGFVS LN+ LR G+S +YFV+LQGKTV ELWAEYKAAFGNR
Sbjct: 172 YDKTARFMDYLEGRRSGFVSALNRMLRVGYSPEYFVQLQGKTVAELWAEYKAAFGNR 228

[Close]

BLAST of Chy1G000910 vs. NCBI nr
Match: KGN43891.1 (hypothetical protein Csa_017180 [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 2.30e-19
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGNR 73
           Y K  RFMDYLE R SGFVS LN+ LR G+S +YFV+LQGKTV ELWAEYKAAFGNR
Sbjct: 203 YDKTARFMDYLEGRRSGFVSALNRMLRVGYSPEYFVQLQGKTVAELWAEYKAAFGNR 259

[Close]

BLAST of Chy1G000910 vs. NCBI nr
Match: KAG7011631.1 (hypothetical protein SDJN02_26537, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 86.7 bits (213), Expect = 5.82e-19
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 72
           Y K  RF+DYLE R SGFVS+LN+ LR+G+S DYFV+LQGK V +LWAEYKAAFGN
Sbjct: 146 YDKTARFLDYLETRRSGFVSELNRMLRNGYSPDYFVQLQGKPVAQLWAEYKAAFGN 201

[Close]

BLAST of Chy1G000910 vs. NCBI nr
Match: XP_022972383.1 (uncharacterized protein LOC111470953 [Cucurbita maxima])

HSP 1 Score: 86.7 bits (213), Expect = 9.45e-19
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFGN 72
           Y K  RF+DYLE R SGFVS+LN+ LR+G+S DYFV+LQGK V +LWAEYKAAFGN
Sbjct: 170 YDKTARFLDYLETRRSGFVSELNRMLRNGYSPDYFVQLQGKPVAQLWAEYKAAFGN 225

[Close]

BLAST of Chy1G000910 vs. TAIR 10
Match: AT2G15220.1 (Plant basic secretory protein (BSP) family protein )

HSP 1 Score: 63.9 bits (154), Expect = 6.2e-11
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFG 72
           Y    RF+DY     +GFV++LN+K+R+G+S  +FV+L GK V++LW EYKA +G
Sbjct: 170 YDVTARFLDYCNGLRNGFVAELNKKMRNGYSDGFFVDLLGKDVNQLWREYKAKYG 224

[Close]

BLAST of Chy1G000910 vs. TAIR 10
Match: AT2G15130.1 (Plant basic secretory protein (BSP) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 3.4e-09
Identity = 24/55 (43.64%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFG 72
           Y    RF++Y     +GFV++LN+K+R  ++  +FV+L GK V++LW EYKA +G
Sbjct: 170 YDVTARFLEYCNDLRNGFVAELNKKMRSDYNDGFFVDLLGKDVNQLWREYKANYG 224

[Close]

BLAST of Chy1G000910 vs. TAIR 10
Match: AT2G15130.2 (Plant basic secretory protein (BSP) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 3.4e-09
Identity = 24/55 (43.64%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 17  YGKKIRFMDYLEKRTSGFVSKLNQKLRDGFSLDYFVELQGKTVDELWAEYKAAFG 72
           Y    RF++Y     +GFV++LN+K+R  ++  +FV+L GK V++LW EYKA +G
Sbjct: 89  YDVTARFLEYCNDLRNGFVAELNKKMRSDYNDGFFVDLLGKDVNQLWREYKANYG 143

The following BLAST results are available for this feature:

BLAST of Chy1G000910 vs.


Match Name	E-value	Identity	Description

BLAST of Chy1G000910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6G6	4.2e-23	94.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072790 PE=4 SV=1	[more]
A0A0A0K7U8	4.2e-15	75.44	NtPRp27-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G072780 PE=4 SV=1	[more]
A0A6J1I9S7	2.1e-14	71.43	uncharacterized protein LOC111470953 OS=Cucurbita maxima OX=3661 GN=LOC111470953...	[more]
A0A411HRA5	2.1e-14	71.43	PRp27-like protein OS=Cucurbita pepo subsp. pepo OX=3664 PE=2 SV=1	[more]
A0A6J1GLC5	2.1e-14	71.43	uncharacterized protein LOC111455379 OS=Cucurbita moschata OX=3662 GN=LOC1114553...	[more]

BLAST of Chy1G000910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137102.2	2.17e-31	94.83	uncharacterized protein LOC101216547 [Cucumis sativus]	[more]
XP_004137101.1	1.31e-19	75.44	uncharacterized protein LOC101216297 [Cucumis sativus]	[more]
KGN43891.1	2.30e-19	75.44	hypothetical protein Csa_017180 [Cucumis sativus]	[more]
KAG7011631.1	5.82e-19	71.43	hypothetical protein SDJN02_26537, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022972383.1	9.45e-19	71.43	uncharacterized protein LOC111470953 [Cucurbita maxima]	[more]

BLAST of Chy1G000910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15220.1	6.2e-11	49.09	Plant basic secretory protein (BSP) family protein	[more]
AT2G15130.1	3.4e-09	43.64	Plant basic secretory protein (BSP) family protein	[more]
AT2G15130.2	3.4e-09	43.64	Plant basic secretory protein (BSP) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007541	Uncharacterised protein family, basic secretory protein	PFAM	PF04450	BSP	coord: 20..66 e-value: 1.9E-10 score: 40.9
IPR007541	Uncharacterised protein family, basic secretory protein	PANTHER	PTHR33321	FAMILY NOT NAMED	coord: 19..70
None	No IPR available	PANTHER	PTHR33321:SF12	PLANT BASIC SECRETORY PROTEIN (BSP) FAMILY PROTEIN	coord: 19..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G000910.1	Chy1G000910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane